The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP007715	Actinobacillus equuli subsp. equuli strain 19392, complete genome	2431533	357151	366654	2431533		Stx_converting_phage(33.33%)	8	NA	NA
WP_039196326.1|357151_358525_-	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	27.7	1.2e-14
WP_039196327.1|358517_359183_-	response regulator	NA	Q6XM27	Feldmannia_irregularis_virus	27.3	8.5e-06
WP_039196328.1|359378_359738_-	YgiW/YdeI family stress tolerance OB fold protein	NA	A0A1I9LJU6	Stx_converting_phage	38.7	5.1e-13
WP_039196329.1|359797_360166_-	YgiW/YdeI family stress tolerance OB fold protein	NA	A0A1I9LJU6	Stx_converting_phage	43.0	1.6e-14
WP_039196330.1|360202_360586_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA	NA
WP_039196331.1|360832_362098_-	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	51.4	2.1e-98
WP_039196332.1|362329_363217_-	NAD(+) kinase	NA	NA	NA	NA	NA
WP_039196333.1|363306_366654_-	type I-F CRISPR-associated helicase Cas3	NA	A0A2D0YI93	Vibrio_phage	28.4	2.2e-73
>prophage 2
NZ_CP007715	Actinobacillus equuli subsp. equuli strain 19392, complete genome	2431533	504904	515477	2431533		Salmonella_phage(16.67%)	10	NA	NA
WP_039196431.1|504904_506101_+	Bcr/CflA family multidrug efflux MFS transporter	NA	S4TR35	Salmonella_phage	23.9	3.2e-19
WP_039196432.1|506148_506535_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039196433.1|506609_507179_-	molecular chaperone	NA	NA	NA	NA	NA
WP_039196434.1|507236_508079_+	deoxyribonuclease IV	NA	L7RDB2	Acanthamoeba_polyphaga_moumouvirus	33.3	7.4e-31
WP_039198954.1|508212_508803_+	hypothetical protein	NA	A0A068EMN7	Bacillus_phage	38.1	9.9e-14
WP_039196435.1|508842_509298_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_005622661.1|509532_509919_-	autonomous glycyl radical cofactor GrcA	NA	D9ICE0	Escherichia_virus	59.1	3.1e-32
WP_039196436.1|510123_510795_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	47.2	3.6e-52
WP_039196437.1|510982_511381_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_039196438.1|511577_515477_-	ATP-dependent RNA helicase HrpA	NA	A0A1V0SBU4	Catovirus	26.6	3.2e-52
>prophage 3
NZ_CP007715	Actinobacillus equuli subsp. equuli strain 19392, complete genome	2431533	621953	667656	2431533	integrase,portal,head,plate,terminase,tail,transposase	Mannheimia_phage(60.42%)	64	639036:639052	677621:677637
WP_039196560.1|621953_623162_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4J5F8	uncultured_Caudovirales_phage	33.0	7.4e-48
WP_039196562.1|623196_623412_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_039196564.1|623408_623816_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039196566.1|623821_624016_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039196567.1|624470_624734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039196569.1|624744_625191_-	single-stranded DNA-binding protein	NA	A0A2I7RK19	Vibrio_phage	62.5	7.7e-35
WP_039196571.1|625178_625376_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052190377.1|625392_627642_-	replication endonuclease	NA	Q94N00	Haemophilus_virus	50.0	6.4e-170
WP_156112312.1|627795_627936_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039196573.1|627932_628388_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039196574.1|628390_628720_-	hypothetical protein	NA	Q19UT2	Mannheimia_phage	57.1	4.6e-21
WP_039196576.1|629158_629371_-	helix-turn-helix domain-containing protein	NA	Q19UN8	Mannheimia_phage	68.9	7.6e-17
WP_039196578.1|629485_630175_+	helix-turn-helix transcriptional regulator	NA	A0A0M3LPF9	Mannheimia_phage	64.6	1.9e-77
WP_039196580.1|630204_630387_+	hypothetical protein	NA	A0A0R6PIB1	Moraxella_phage	58.3	7.0e-11
WP_039196581.1|630719_631565_-	hypothetical protein	NA	F6MIM2	Haemophilus_phage	66.2	2.9e-107
WP_081978351.1|631628_631742_-	Com family DNA-binding transcriptional regulator	NA	F6MIM1	Haemophilus_phage	71.4	6.4e-07
WP_039196582.1|631881_632145_-	hypothetical protein	NA	A0A0M3LNN9	Mannheimia_phage	74.1	4.7e-32
WP_039196584.1|632134_632770_-	DUF4376 domain-containing protein	NA	Q7Y5S1	Haemophilus_phage	36.1	2.1e-33
WP_039196587.1|634219_634804_-	DUF2313 domain-containing protein	NA	F6MIL7	Haemophilus_phage	82.4	6.0e-88
WP_039196589.1|634803_635865_-|plate	baseplate J/gp47 family protein	plate	F6MIL6	Haemophilus_phage	77.9	3.7e-152
WP_039196598.1|635867_636218_-	hypothetical protein	NA	A0A0M3LQK5	Mannheimia_phage	86.2	6.0e-51
WP_039196599.1|636316_636979_-|plate	phage baseplate assembly protein V	plate	A0A0M3LPA3	Mannheimia_phage	73.1	2.3e-83
WP_039196600.1|636975_638139_-|tail	tail protein	tail	A0A0M3LPS4	Mannheimia_phage	92.7	1.5e-199
WP_039196603.1|638142_639501_-	hypothetical protein	NA	F6MIL2	Haemophilus_phage	59.3	1.6e-152
639036:639052	attL	ACCAAGCGGTCACTTTT	NA	NA	NA	NA
WP_039196606.1|639500_641684_-	hypothetical protein	NA	A0A0M3LPB6	Mannheimia_phage	41.1	2.4e-105
WP_126374519.1|641737_641926_-	hypothetical protein	NA	A0A0M3LSQ8	Mannheimia_phage	81.7	5.0e-20
WP_039196607.1|641961_642330_-	hypothetical protein	NA	A0A0M3LSI2	Mannheimia_phage	74.6	6.7e-45
WP_039196610.1|642329_642704_-	hypothetical protein	NA	A0A0M3LRV6	Mannheimia_phage	77.4	1.3e-51
WP_039196615.1|642713_644126_-|tail	tail sheath protein	tail	A0A0M3LQC3	Mannheimia_phage	90.9	2.3e-234
WP_039196616.1|644125_644305_-	DUF2635 domain-containing protein	NA	A0A0M3LQM9	Mannheimia_phage	89.8	6.0e-23
WP_039196618.1|644305_644947_-	DUF1834 family protein	NA	A0A0M3LQJ7	Mannheimia_phage	88.7	2.5e-103
WP_039196620.1|644943_645369_-	DUF1320 domain-containing protein	NA	A0A0M3LP98	Mannheimia_phage	80.9	3.6e-58
WP_039196622.1|645368_645743_-	hypothetical protein	NA	A0A0M3LPR6	Mannheimia_phage	76.6	9.6e-23
WP_039196624.1|645787_646705_-	hypothetical protein	NA	A0A0A1IWZ9	Pseudomonas_phage	40.1	4.7e-55
WP_039196626.1|646704_647781_-	hypothetical protein	NA	B7SDN9	Haemophilus_phage	74.3	5.4e-143
WP_039196627.1|648049_648466_-	phage virion morphogenesis protein	NA	A0A0M3LSP9	Mannheimia_phage	84.7	2.6e-61
WP_039196628.1|648613_649903_-|head	head morphogenesis protein	head	B7SDN5	Haemophilus_phage	82.1	1.0e-212
WP_039196629.1|649889_651530_-	DUF935 domain-containing protein	NA	A0A0M3LRU4	Mannheimia_phage	87.2	1.4e-280
WP_039196631.1|651589_653215_-|terminase	phage terminase large subunit	terminase	A0A0M3LQB7	Mannheimia_phage	92.2	7.3e-301
WP_039196634.1|653370_653871_-	DUF1804 family protein	NA	A0A0M3LQI8	Mannheimia_phage	92.2	3.1e-77
WP_039196635.1|653880_654135_-	hypothetical protein	NA	A0A0M3LP87	Mannheimia_phage	65.5	3.6e-21
WP_039196637.1|654134_654392_-	hypothetical protein	NA	A0A0M3LPQ4	Mannheimia_phage	80.5	8.4e-10
WP_039196638.1|654554_654944_-	DUF2681 domain-containing protein	NA	A0A0M3LP93	Mannheimia_phage	45.0	6.9e-16
WP_018652747.1|654943_655165_-	DUF2644 domain-containing protein	NA	F6MIK0	Haemophilus_phage	88.6	4.9e-27
WP_039196642.1|655167_655713_-	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	69.8	2.6e-69
WP_039196644.1|655799_656225_-	mor transcription activator family protein	NA	A0A0M3LRS6	Mannheimia_phage	47.5	6.8e-33
WP_039196646.1|656510_656741_+	hypothetical protein	NA	NA	NA	NA	NA
WP_129545063.1|656759_656933_+	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
WP_039196648.1|656962_657394_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039196651.1|657484_657916_-	regulatory protein GemA	NA	F6MIJ6	Haemophilus_phage	66.0	1.6e-45
WP_039196653.1|657899_658466_-	hypothetical protein	NA	A0A0M3LPP6	Mannheimia_phage	71.8	7.6e-72
WP_039196656.1|658452_658659_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039198968.1|658670_658922_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039196657.1|658935_659148_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039196659.1|659228_659750_-	host-nuclease inhibitor protein Gam	NA	F6MIJ0	Haemophilus_phage	58.1	3.4e-50
WP_039196660.1|659759_659978_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039196661.1|660068_660380_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039196664.1|660376_660574_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039196668.1|660583_661465_-	AAA family ATPase	NA	A0A0M3LP72	Mannheimia_phage	67.9	2.3e-107
WP_039196669.1|661474_663445_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A0M3LPN5	Mannheimia_phage	58.5	5.9e-212
WP_039196670.1|663489_663768_-	DNA-binding protein	NA	F6MII4	Haemophilus_phage	61.2	2.0e-17
WP_018652728.1|663944_664664_+	helix-turn-helix transcriptional regulator	NA	F6MII3	Haemophilus_phage	60.7	5.5e-67
WP_039196676.1|664854_666609_+|terminase	terminase	terminase	A0A0M3LRV4	Mannheimia_phage	65.1	1.1e-212
WP_039196679.1|666621_667656_+|portal	phage portal protein	portal	Q19UT6	Mannheimia_phage	61.7	1.7e-117
677621:677637	attR	AAAAGTGACCGCTTGGT	NA	NA	NA	NA
>prophage 4
NZ_CP007715	Actinobacillus equuli subsp. equuli strain 19392, complete genome	2431533	1150691	1157250	2431533		Staphylococcus_phage(50.0%)	7	NA	NA
WP_081978361.1|1150691_1151981_+	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	31.8	7.4e-30
WP_039197147.1|1152108_1153044_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	35.8	3.7e-39
WP_005611555.1|1153053_1153542_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_005600491.1|1153629_1154091_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	58.8	3.0e-42
WP_039197148.1|1154201_1155407_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	50.0	2.4e-107
WP_039197149.1|1155469_1156117_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	43.3	4.1e-45
WP_039197150.1|1156164_1157250_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	35.8	3.9e-48
