The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP009962	Collimonas arenae strain Cal35 chromosome, complete genome	5603532	1134510	1147623	5603532	terminase	Burkholderia_virus(27.27%)	23	NA	NA
WP_038486101.1|1134510_1135449_-	DNA cytosine methyltransferase	NA	Q6J1P4	Burkholderia_virus	55.8	1.6e-103
WP_156117433.1|1135455_1135626_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052135488.1|1135782_1136163_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038486103.1|1136353_1136866_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156117434.1|1136858_1137089_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038486109.1|1137085_1137715_-	YqaJ viral recombinase family protein	NA	R9TG13	Synechococcus_phage	39.9	5.0e-32
WP_081992060.1|1137717_1138707_-	recombinase RecT	NA	A9DEN8	Yersinia_phage	54.1	1.5e-67
WP_038486112.1|1138721_1139021_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156117435.1|1139030_1139180_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038486115.1|1139176_1139560_-	DUF551 domain-containing protein	NA	NA	NA	NA	NA
WP_081992063.1|1139556_1140117_-	HNH endonuclease	NA	A0A0N9ESC4	Pseudomonas_phage	41.5	8.2e-18
WP_052134710.1|1140148_1140358_-	hypothetical protein	NA	A0A218M3C4	Acidovorax_phage	45.6	8.3e-08
WP_038486118.1|1140674_1141337_-	helix-turn-helix domain-containing protein	NA	Q6J1N3	Burkholderia_virus	49.4	1.4e-53
WP_038486121.1|1141412_1141661_+	helix-turn-helix domain-containing protein	NA	Q6J1N2	Burkholderia_virus	54.4	1.5e-08
WP_081992066.1|1141657_1141966_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_038486124.1|1141975_1142164_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038486128.1|1142237_1142672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052134711.1|1142672_1143371_+	conserved phage C-terminal domain-containing protein	NA	A0A2I7QQK8	Vibrio_phage	30.1	4.9e-20
WP_038486131.1|1143370_1143724_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052134713.1|1143711_1144629_+	AAA family ATPase	NA	K4NWL6	Pseudomonas_phage	36.9	1.6e-47
WP_052134715.1|1144644_1145139_+	RusA family crossover junction endodeoxyribonuclease	NA	NA	NA	NA	NA
WP_038486134.1|1145452_1146082_+	hypothetical protein	NA	G8C7P2	Escherichia_phage	46.4	5.2e-37
WP_038486137.1|1146078_1147623_+|terminase	terminase	terminase	K4NWT7	Pseudomonas_phage	50.3	3.7e-129
>prophage 2
NZ_CP009962	Collimonas arenae strain Cal35 chromosome, complete genome	5603532	1160494	1180066	5603532	integrase	Pseudomonas_phage(22.22%)	15	1158461:1158475	1179584:1179598
1158461:1158475	attL	GCCAGCCAGCAGGTG	NA	NA	NA	NA
WP_052134724.1|1160494_1160938_+	hypothetical protein	NA	A0A1L7DS85	Ralstonia_virus	42.6	5.7e-22
WP_038486181.1|1160940_1161477_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038486184.1|1161476_1163768_+	transglycosylase SLT domain-containing protein	NA	K4NWI2	Pseudomonas_phage	24.7	4.8e-16
WP_038486187.1|1163764_1169776_+	hypothetical protein	NA	Q775D4	Bordetella_phage	27.7	1.1e-155
WP_038486190.1|1169862_1172022_+	hypothetical protein	NA	U6C860	Ralstonia_phage	37.6	4.1e-81
WP_038486193.1|1172030_1172255_+	hypothetical protein	NA	A0A0M5M702	Caulobacter_phage	65.1	2.3e-19
WP_038486196.1|1172261_1172456_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038486199.1|1172448_1172928_+	hypothetical protein	NA	A0A2H4J0Z0	uncultured_Caudovirales_phage	47.8	3.1e-34
WP_038486202.1|1172927_1173548_+	hypothetical protein	NA	A0A0E3M0Y2	Rhodoferax_phage	28.9	7.2e-07
WP_156117441.1|1173566_1174715_-	EpsG family protein	NA	NA	NA	NA	NA
WP_038486208.1|1174768_1174951_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038486211.1|1174973_1175981_-|integrase	site-specific integrase	integrase	A0A0A0YR56	Pseudomonas_phage	37.8	7.0e-44
WP_038486214.1|1176324_1178043_-	glycosyl transferase	NA	NA	NA	NA	NA
WP_038486217.1|1178273_1178543_-	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_081992075.1|1178773_1180066_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	38.1	2.7e-64
1179584:1179598	attR	CACCTGCTGGCTGGC	NA	NA	NA	NA
>prophage 3
NZ_CP009962	Collimonas arenae strain Cal35 chromosome, complete genome	5603532	1375468	1383143	5603532	protease	Phage_21(16.67%)	7	NA	NA
WP_038486581.1|1375468_1376722_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	63.0	1.2e-11
WP_009665919.1|1376863_1377067_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	81.8	1.4e-23
WP_038486586.1|1377403_1377712_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	48.1	5.7e-13
WP_038486588.1|1377708_1380009_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.6	3.6e-168
WP_038486589.1|1380169_1381270_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_038486591.1|1381269_1381719_-	dUTP diphosphatase	NA	Q2NP83	Xanthomonas_phage	63.0	4.7e-48
WP_038486595.1|1381916_1383143_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	32.0	5.4e-38
>prophage 4
NZ_CP009962	Collimonas arenae strain Cal35 chromosome, complete genome	5603532	3049217	3055989	5603532		uncultured_Mediterranean_phage(33.33%)	7	NA	NA
WP_038489525.1|3049217_3049634_-	nucleoside-diphosphate kinase	NA	A0A167REB2	Powai_lake_megavirus	42.1	6.5e-20
WP_038489528.1|3049928_3050624_+	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	35.8	1.2e-23
WP_038489531.1|3050686_3052036_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.2	6.5e-29
WP_156117522.1|3052239_3053271_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	33.6	1.4e-34
WP_038489534.1|3053271_3054252_-	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA	NA
WP_038489536.1|3054349_3055255_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	50.0	5.7e-37
WP_038489539.1|3055251_3055989_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	55.4	1.2e-69
>prophage 5
NZ_CP009962	Collimonas arenae strain Cal35 chromosome, complete genome	5603532	4277044	4362326	5603532	portal,head,tail,plate,protease,terminase,transposase,capsid,integrase,holin	Burkholderia_phage(42.86%)	104	4322019:4322035	4363129:4363145
WP_038491841.1|4277044_4278529_+|protease	DegQ family serine endoprotease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	29.5	3.5e-23
WP_038491844.1|4278556_4278862_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038491847.1|4279376_4279826_+	YciI family protein	NA	NA	NA	NA	NA
WP_038491850.1|4279877_4280405_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_038491853.1|4280457_4280874_+	VOC family protein	NA	NA	NA	NA	NA
WP_038491855.1|4281137_4281365_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038491858.1|4281428_4281905_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_172657047.1|4282034_4282673_+	arylformamidase	NA	NA	NA	NA	NA
WP_038491864.1|4282683_4283946_+	kynureninase	NA	NA	NA	NA	NA
WP_038491867.1|4283964_4284807_+	tryptophan 2,3-dioxygenase	NA	NA	NA	NA	NA
WP_038491870.1|4284823_4285411_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038491873.1|4285428_4285674_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038491876.1|4285666_4286605_-	DNA/RNA non-specific endonuclease	NA	H6X497	Enterobacteria_phage	31.4	3.5e-29
WP_038491879.1|4286698_4287217_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052135307.1|4287303_4288299_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_038491882.1|4288474_4289083_+	isochorismatase family protein	NA	NA	NA	NA	NA
WP_038491885.1|4289232_4289898_+	signal peptidase I	NA	NA	NA	NA	NA
WP_038491888.1|4289900_4290824_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_038491891.1|4290986_4292285_+	citrate transporter	NA	NA	NA	NA	NA
WP_038491894.1|4292316_4293651_+	DUF1446 domain-containing protein	NA	NA	NA	NA	NA
WP_038491896.1|4293652_4293985_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038491899.1|4294154_4295036_+	DMT family transporter	NA	NA	NA	NA	NA
WP_038491902.1|4295158_4295383_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038491905.1|4295412_4295955_+	DUF2975 domain-containing protein	NA	NA	NA	NA	NA
WP_038491908.1|4295963_4296197_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_156117578.1|4296248_4296884_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038491914.1|4297167_4297383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052135308.1|4297898_4298420_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_038491917.1|4298572_4299907_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_038491919.1|4300220_4300652_-	universal stress protein	NA	NA	NA	NA	NA
WP_052135309.1|4301254_4302379_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_081992532.1|4302380_4303190_+	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	26.1	2.0e-09
WP_038491922.1|4303205_4304135_+	MCE family protein	NA	NA	NA	NA	NA
WP_172657006.1|4304644_4304791_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038491925.1|4304871_4305456_+	prepilin peptidase	NA	NA	NA	NA	NA
WP_038491928.1|4305486_4306326_+	Flp pilus assembly protein CpaB	NA	NA	NA	NA	NA
WP_081992812.1|4306397_4307879_+	type II and III secretion system protein	NA	NA	NA	NA	NA
WP_038491931.1|4307890_4308163_+	lipoprotein	NA	NA	NA	NA	NA
WP_038491934.1|4308338_4308548_+	Flp family type IVb pilin	NA	NA	NA	NA	NA
WP_038496783.1|4308704_4308881_+	Flp family type IVb pilin	NA	NA	NA	NA	NA
WP_081992536.1|4309031_4310228_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038491940.1|4310236_4310692_+	pilus assembly protein	NA	NA	NA	NA	NA
WP_038491943.1|4310688_4311117_+	pilus assembly protein	NA	NA	NA	NA	NA
WP_038491946.1|4311134_4312286_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_038491951.1|4312366_4313713_+	CpaF family protein	NA	NA	NA	NA	NA
WP_038491953.1|4313726_4314719_+	type II secretion system F family protein	NA	NA	NA	NA	NA
WP_038491956.1|4314729_4315641_+	type II secretion system F family protein	NA	NA	NA	NA	NA
WP_172657048.1|4315714_4316371_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_081992538.1|4316413_4318120_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052135310.1|4319429_4320524_+	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA	NA
WP_052135311.1|4320841_4321219_-	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
WP_081992540.1|4321227_4321710_-	lysozyme	NA	NA	NA	NA	NA
WP_038491964.1|4321834_4322113_-|transposase	transposase	transposase	U5P4I9	Shigella_phage	53.7	3.8e-16
4322019:4322035	attL	AGACGATCAGCGACCAC	NA	NA	NA	NA
WP_081992814.1|4322296_4323088_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_081992542.1|4323192_4325250_-	YadA-like family protein	NA	NA	NA	NA	NA
WP_156117580.1|4325361_4325697_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038491974.1|4325906_4326116_-	hypothetical protein	NA	A0A2I7R756	Vibrio_phage	44.4	1.1e-07
WP_038491978.1|4326112_4327174_-|portal	phage portal protein	portal	E5E3X1	Burkholderia_phage	64.8	8.5e-133
WP_081992544.1|4327170_4328991_-|terminase	terminase ATPase subunit family protein	terminase	E5FFI8	Burkholderia_phage	65.0	1.9e-225
WP_038491981.1|4329132_4329978_+|capsid	GPO family capsid scaffolding protein	capsid	E5FFI7	Burkholderia_phage	57.8	5.0e-59
WP_038491984.1|4330031_4331042_+|capsid	phage major capsid protein, P2 family	capsid	E5E3W8	Burkholderia_phage	62.3	5.5e-121
WP_038491987.1|4331038_4331752_+|integrase	integrase	integrase	E5FFI5	Burkholderia_phage	45.1	7.4e-40
WP_038491989.1|4331851_4332349_+|head	head completion/stabilization protein	head	E5E3S2	Burkholderia_phage	49.7	1.9e-34
WP_038491993.1|4332348_4332558_+|tail	tail protein X	tail	A0A2H4J946	uncultured_Caudovirales_phage	62.7	5.7e-17
WP_038491996.1|4332574_4332931_+	membrane protein	NA	E5FFI2	Burkholderia_phage	59.6	3.6e-27
WP_038491999.1|4332923_4333208_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_038492002.1|4333188_4333647_+	peptidase M15	NA	R4JMG7	Burkholderia_phage	60.4	5.3e-39
WP_052135313.1|4333637_4334048_+	DUF2570 family protein	NA	NA	NA	NA	NA
WP_038492008.1|4334152_4334641_+|tail	phage tail protein	tail	A0A2H4J906	uncultured_Caudovirales_phage	49.7	4.4e-36
WP_038492011.1|4334637_4335105_+	phage virion morphogenesis protein	NA	A0A1S5NPT5	Burkholderia_phage	46.8	2.6e-25
WP_081992545.1|4335108_4335597_-	YcxB family protein	NA	NA	NA	NA	NA
WP_038492017.1|4335657_4336446_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052135314.1|4336778_4337435_+|plate	phage baseplate assembly protein V	plate	D5LGZ5	Escherichia_phage	32.6	9.0e-24
WP_038492019.1|4337431_4337776_+	GPW/gp25 family protein	NA	V9IQW0	Stenotrophomonas_phage	57.3	2.3e-23
WP_038492021.1|4337772_4338669_+|plate	baseplate J/gp47 family protein	plate	F1BUP3	Erwinia_phage	42.3	2.8e-52
WP_038492024.1|4338665_4339235_+|tail	phage tail protein I	tail	V5YTN0	Pseudomonas_phage	54.9	1.1e-22
WP_052135315.1|4339245_4339995_+|tail	tail fiber protein	tail	A0A1W6JT73	Escherichia_phage	54.2	7.6e-35
WP_052135316.1|4340008_4340584_+|tail	tail assembly chaperone	tail	A4PE47	Ralstonia_virus	48.8	5.8e-27
WP_038492025.1|4340617_4341790_+|tail	phage tail sheath protein	tail	E5FFG9	Burkholderia_phage	69.1	7.6e-159
WP_038492028.1|4341817_4342327_+|tail	phage major tail tube protein	tail	E5FFG8	Burkholderia_phage	58.0	6.7e-51
WP_052135317.1|4342384_4342720_+|tail	phage tail assembly protein	tail	A4PE51	Ralstonia_virus	55.6	5.8e-19
WP_038492031.1|4342728_4342845_+|tail	GpE family phage tail protein	tail	Q9ZXK1	Pseudomonas_virus	70.3	3.5e-08
WP_038492034.1|4342848_4345503_+|tail	tail protein	tail	A4PE52	Ralstonia_virus	52.7	3.1e-232
WP_038492037.1|4345516_4346044_+|tail	phage tail protein	tail	A0A2H4JG54	uncultured_Caudovirales_phage	58.6	1.9e-37
WP_038492039.1|4346301_4346490_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038492043.1|4346589_4347852_+	phage late control protein	NA	A0A2H4JAV0	uncultured_Caudovirales_phage	44.4	9.0e-89
WP_038492048.1|4347932_4348829_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038492050.1|4350866_4352303_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172657007.1|4352408_4352759_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172657008.1|4352808_4353294_-	helix-turn-helix transcriptional regulator	NA	A0A1S5NPU3	Burkholderia_phage	40.8	7.1e-18
WP_038492053.1|4353367_4353565_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038492056.1|4353581_4353779_+	hypothetical protein	NA	E5E3U0	Burkholderia_phage	55.6	3.7e-10
WP_038492058.1|4353828_4354023_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081992550.1|4354013_4354265_+	ogr/Delta-like zinc finger family protein	NA	K4PAZ0	Burkholderia_phage	46.9	1.9e-14
WP_038492061.1|4354468_4354750_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038492064.1|4354993_4355212_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038492067.1|4355310_4355655_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052135319.1|4355651_4357616_+	replication endonuclease	NA	A4JWW0	Burkholderia_virus	38.8	3.8e-86
WP_081992817.1|4357636_4358239_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156117582.1|4358247_4358436_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038492071.1|4358428_4358713_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081992819.1|4358715_4358943_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_081992552.1|4358926_4359979_+|integrase	tyrosine-type recombinase/integrase	integrase	E5E3N4	Burkholderia_phage	28.9	1.3e-11
WP_038492074.1|4360343_4362326_-	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	44.3	4.9e-89
4363129:4363145	attR	GTGGTCGCTGATCGTCT	NA	NA	NA	NA
