assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000784945.1_ASM78494v1	NZ_CP009863	Klebsiella pneumoniae subsp. pneumoniae strain KPNIH29 chromosome, complete genome	1	843180-843265	1	CRISPRCasFinder	no		DEDDh,cas3,WYL,DinG,csa3,RT	Orphan	AATAAAAACCATAAAAACCACAGT	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,DinG,csa3,RT	NA,NA	NA|160aa|up_9|NZ_CP009863.1_832154_832634_+	PRK10769, folA, type 3 dihydrofolate reductase	NA|283aa|up_8|NZ_CP009863.1_832885_833734_-	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|126aa|up_7|NZ_CP009863.1_833738_834116_-	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|274aa|up_6|NZ_CP009863.1_834118_834940_-	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|330aa|up_5|NZ_CP009863.1_834936_835926_-	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|429aa|up_4|NZ_CP009863.1_835931_837218_-	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|783aa|up_3|NZ_CP009863.1_837272_839621_-	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|276aa|up_2|NZ_CP009863.1_839864_840692_+	PRK09430, djlA, co-chaperone DjlA	NA|233aa|up_1|NZ_CP009863.1_840724_841423_-	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]	NA|542aa|up_0|NZ_CP009863.1_841412_843038_-	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms]	NA|455aa|down_0|NZ_CP009863.1_843362_844727_+	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family	NA|180aa|down_1|NZ_CP009863.1_844906_845446_+	TIGR03124, citrate_citX, holo-ACP synthase CitX	NA|220aa|down_2|NZ_CP009863.1_845520_846180_-	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|969aa|down_3|NZ_CP009863.1_846192_849099_-	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|786aa|down_4|NZ_CP009863.1_849286_851644_-	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|232aa|down_5|NZ_CP009863.1_851819_852515_-	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|501aa|down_6|NZ_CP009863.1_852652_854155_-	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|570aa|down_7|NZ_CP009863.1_854165_855875_-	PRK04123, PRK04123, ribulokinase; Provisional	NA|282aa|down_8|NZ_CP009863.1_856212_857058_+	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|256aa|down_9|NZ_CP009863.1_857186_857954_+	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]
GCF_000784945.1_ASM78494v1	NZ_CP009863	Klebsiella pneumoniae subsp. pneumoniae strain KPNIH29 chromosome, complete genome	2	1706036-1706113	2	CRISPRCasFinder	no		DEDDh,cas3,WYL,DinG,csa3,RT	Orphan	AAGGCGTCAGCCGCCGCCCGGCA	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,DinG,csa3,RT	NA,NA|71aa|down_7|NZ_CP009863.1_1712714_1712927_-	NA|362aa|up_9|NZ_CP009863.1_1691092_1692178_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|144aa|up_8|NZ_CP009863.1_1692711_1693143_+	PRK15456, PRK15456, universal stress protein UspG; Provisional	NA|896aa|up_7|NZ_CP009863.1_1693194_1695882_+	cd02080, P-type_ATPase_cation, P-type cation-transporting ATPase similar to Exiguobacterium aurantiacum Mna, an Na(+)-ATPase, and Synechocystis sp	NA|428aa|up_6|NZ_CP009863.1_1696154_1697438_-	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|440aa|up_5|NZ_CP009863.1_1697592_1698912_+	PRK09356, PRK09356, imidazolonepropionase; Validated	NA|319aa|up_4|NZ_CP009863.1_1698908_1699865_+	PRK01722, PRK01722, formimidoylglutamase; Provisional	NA|242aa|up_3|NZ_CP009863.1_1699926_1700652_+	PRK14999, PRK14999, histidine utilization repressor; Provisional	NA|313aa|up_2|NZ_CP009863.1_1701544_1702483_+	PRK05414, PRK05414, urocanate hydratase; Provisional	NA|509aa|up_1|NZ_CP009863.1_1702479_1704006_+	PRK09367, PRK09367, histidine ammonia-lyase; Provisional	NA|461aa|up_0|NZ_CP009863.1_1704104_1705487_+	PRK10580, proY, putative proline-specific permease; Provisional	NA|159aa|down_0|NZ_CP009863.1_1706265_1706742_-	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|430aa|down_1|NZ_CP009863.1_1706812_1708102_-	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|347aa|down_2|NZ_CP009863.1_1708315_1709356_+	PRK15108, PRK15108, biotin synthase; Provisional	NA|386aa|down_3|NZ_CP009863.1_1709352_1710510_+	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|252aa|down_4|NZ_CP009863.1_1710493_1711249_+	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|241aa|down_5|NZ_CP009863.1_1711241_1711964_+	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|241aa|down_6|NZ_CP009863.1_1711905_1712628_-	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|71aa|down_7|NZ_CP009863.1_1712714_1712927_-	NA	NA|674aa|down_8|NZ_CP009863.1_1713338_1715360_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|366aa|down_9|NZ_CP009863.1_1715608_1716706_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB
GCF_000784945.1_ASM78494v1	NZ_CP009863	Klebsiella pneumoniae subsp. pneumoniae strain KPNIH29 chromosome, complete genome	3	4661015-4661301	1	PILER-CR	no		DEDDh,cas3,WYL,DinG,csa3,RT	Orphan	CTGACCGATAAGCCGCGTTCTTTTGGTATAGCGTCGTGGACAGTCATTCATCCTTT	56	0	0	NA	NA	NA	2	2	Orphan	DEDDh,cas3,WYL,DinG,csa3,RT	NA|56aa|up_2|NZ_CP009863.1_4659584_4659752_+,NA	NA|133aa|up_9|NZ_CP009863.1_4654824_4655223_+	COG5393, COG5393, Predicted membrane protein [Function unknown]	NA|99aa|up_8|NZ_CP009863.1_4655219_4655516_+	pfam13997, YqjK, YqjK-like protein	NA|131aa|up_7|NZ_CP009863.1_4655861_4656254_+	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|329aa|up_6|NZ_CP009863.1_4656334_4657321_+	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|123aa|up_5|NZ_CP009863.1_4657447_4657816_+	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|299aa|up_4|NZ_CP009863.1_4657857_4658754_-	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|234aa|up_3|NZ_CP009863.1_4658858_4659560_+	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|56aa|up_2|NZ_CP009863.1_4659584_4659752_+	NA	NA|137aa|up_1|NZ_CP009863.1_4659825_4660236_-	COG3678, CpxP, P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein [Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism]	NA|155aa|up_0|NZ_CP009863.1_4660543_4661008_+	pfam12869, tRNA_anti-like, tRNA_anti-like	NA|382aa|down_0|NZ_CP009863.1_4661767_4662913_-	PRK10342, PRK10342, glycerate kinase I; Provisional	NA|297aa|down_1|NZ_CP009863.1_4662977_4663868_-	PRK11559, garR, tartronate semialdehyde reductase; Provisional	NA|257aa|down_2|NZ_CP009863.1_4663894_4664665_-	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional	NA|444aa|down_3|NZ_CP009863.1_4664691_4666023_-	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter	NA|524aa|down_4|NZ_CP009863.1_4666415_4667987_+	TIGR03248, galactar-dH20, galactarate dehydratase	NA|317aa|down_5|NZ_CP009863.1_4668041_4668992_-	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP)	NA|268aa|down_6|NZ_CP009863.1_4668991_4669795_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|285aa|down_7|NZ_CP009863.1_4670145_4671000_+	PRK12737, gatY, tagatose-bisphosphate aldolase subunit GatY	NA|305aa|down_8|NZ_CP009863.1_4671024_4671939_+	TIGR03828, pfkB, 1-phosphofructokinase	NA|471aa|down_9|NZ_CP009863.1_4671949_4673362_+	COG1299, FruA, Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism]
