assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000784865.1_ASM78486v1	NZ_CP009850	UNVERIFIED_ORG: Enterobacter cloacae strain ECNIH4, complete genome	1	3168670-3169477	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	cas3,RT,csa3,DinG,DEDDh,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL	Type I-F	TTTCTAAGCTGCCTGTACGGCAGTGAAC,TTTCTAAGCTGCCTGTACGGCAGTG,TTTCTAAGCTGCCTGTACGGCAGTG	28,25,25	0	0	NA	NA	I-F:I-F:I-F	13,13,11	13	TypeI-F	cas3,RT,csa3,DinG,DEDDh,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL	NA|77aa|up_5|NZ_CP009850.1_3162465_3162696_+,NA|148aa|down_8|NZ_CP009850.1_3178123_3178567_-	NA|448aa|up_9|NZ_CP009850.1_3155713_3157057_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|205aa|up_8|NZ_CP009850.1_3157066_3157681_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|1230aa|up_7|NZ_CP009850.1_3157809_3161499_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|165aa|up_6|NZ_CP009850.1_3161634_3162129_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|77aa|up_5|NZ_CP009850.1_3162465_3162696_+	NA	NA|323aa|up_4|NZ_CP009850.1_3162673_3163642_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|NZ_CP009850.1_3163756_3165523_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|NZ_CP009850.1_3165522_3167244_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|NZ_CP009850.1_3167289_3167994_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|NZ_CP009850.1_3168278_3168497_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|148aa|down_0|NZ_CP009850.1_3169713_3170157_+	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family	NA|158aa|down_1|NZ_CP009850.1_3170153_3170627_+	COG5654, COG5654, Uncharacterized conserved protein [Function unknown]	cas6f|185aa|down_2|NZ_CP009850.1_3170648_3171203_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|333aa|down_3|NZ_CP009850.1_3171212_3172211_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|312aa|down_4|NZ_CP009850.1_3172224_3173160_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|348aa|down_5|NZ_CP009850.1_3173156_3174200_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|699aa|down_6|NZ_CP009850.1_3174087_3176184_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|328aa|down_7|NZ_CP009850.1_3176180_3177164_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|148aa|down_8|NZ_CP009850.1_3178123_3178567_-	NA	NA|760aa|down_9|NZ_CP009850.1_3178997_3181277_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional
GCF_000784865.1_ASM78486v1	NZ_CP009850	UNVERIFIED_ORG: Enterobacter cloacae strain ECNIH4, complete genome	2	3177439-3177948	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	cas3,RT,csa3,DinG,DEDDh,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL	Type I-F	TTTCTAAGCTGCCTGTACGGCAGTGAAC,TTTCTAAGCTGCCTGTACGGCAGTGAAC,TTTCTAAGCTGCCTGTACGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	8,8,7	8	TypeI-F	cas3,RT,csa3,DinG,DEDDh,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL	NA,NA|148aa|down_0|NZ_CP009850.1_3178123_3178567_-	NA|235aa|up_9|NZ_CP009850.1_3167289_3167994_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_8|NZ_CP009850.1_3168278_3168497_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|148aa|up_7|NZ_CP009850.1_3169713_3170157_+	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family	NA|158aa|up_6|NZ_CP009850.1_3170153_3170627_+	COG5654, COG5654, Uncharacterized conserved protein [Function unknown]	cas6f|185aa|up_5|NZ_CP009850.1_3170648_3171203_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|333aa|up_4|NZ_CP009850.1_3171212_3172211_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|312aa|up_3|NZ_CP009850.1_3172224_3173160_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|348aa|up_2|NZ_CP009850.1_3173156_3174200_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|699aa|up_1|NZ_CP009850.1_3174087_3176184_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|328aa|up_0|NZ_CP009850.1_3176180_3177164_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|148aa|down_0|NZ_CP009850.1_3178123_3178567_-	NA	NA|760aa|down_1|NZ_CP009850.1_3178997_3181277_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_2|NZ_CP009850.1_3181304_3181625_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|74aa|down_3|NZ_CP009850.1_3181892_3182114_+	PRK14998, PRK14998, cold shock-like protein CspD; Provisional	NA|647aa|down_4|NZ_CP009850.1_3182184_3184125_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_5|NZ_CP009850.1_3184121_3185237_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|319aa|down_6|NZ_CP009850.1_3185396_3186353_+	pfam04393, DUF535, Protein of unknown function (DUF535)	NA|553aa|down_7|NZ_CP009850.1_3186349_3188008_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|232aa|down_8|NZ_CP009850.1_3188297_3188993_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|300aa|down_9|NZ_CP009850.1_3189163_3190063_+	COG2431, COG2431, Predicted membrane protein [Function unknown]
GCF_000784865.1_ASM78486v1	NZ_CP009850	UNVERIFIED_ORG: Enterobacter cloacae strain ECNIH4, complete genome	3	3192981-3193188	3,3,3	CRISPRCasFinder,CRT,PILER-CR	no	cas8f,cas3f,cas1	cas3,RT,csa3,DinG,DEDDh,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL	Type I-F	TTTCTAAGCTGCCTGTACGGCAGTGAAC,TTTCTAAGCTGCCTGTACGGCAGTGAAC,TTTCTAAGCTGCCTGTACGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	3,3,2	3	TypeI-F	cas3,RT,csa3,DinG,DEDDh,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL	NA,NA	NA|107aa|up_9|NZ_CP009850.1_3181304_3181625_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|74aa|up_8|NZ_CP009850.1_3181892_3182114_+	PRK14998, PRK14998, cold shock-like protein CspD; Provisional	NA|647aa|up_7|NZ_CP009850.1_3182184_3184125_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|up_6|NZ_CP009850.1_3184121_3185237_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|319aa|up_5|NZ_CP009850.1_3185396_3186353_+	pfam04393, DUF535, Protein of unknown function (DUF535)	NA|553aa|up_4|NZ_CP009850.1_3186349_3188008_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|232aa|up_3|NZ_CP009850.1_3188297_3188993_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|300aa|up_2|NZ_CP009850.1_3189163_3190063_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|551aa|up_1|NZ_CP009850.1_3190207_3191860_+	PRK05290, PRK05290, hybrid cluster protein; Provisional	NA|323aa|up_0|NZ_CP009850.1_3191870_3192839_+	PRK10684, PRK10684, HCP oxidoreductase, NADH-dependent; Provisional	NA|145aa|down_0|NZ_CP009850.1_3193353_3193788_-	pfam07681, DoxX, DoxX	NA|573aa|down_1|NZ_CP009850.1_3193939_3195658_+	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase	NA|334aa|down_2|NZ_CP009850.1_3195696_3196698_+	PRK10534, PRK10534, L-threonine aldolase; Provisional	NA|480aa|down_3|NZ_CP009850.1_3196708_3198148_+	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	NA|338aa|down_4|NZ_CP009850.1_3198237_3199251_+	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|608aa|down_5|NZ_CP009850.1_3199355_3201179_-	cd00325, chitinase_GH19, Glycoside hydrolase family 19, chitinase domain	NA|147aa|down_6|NZ_CP009850.1_3201312_3201753_-	PRK15328, PRK15328, type III secretion system invasion protein IagB	NA|622aa|down_7|NZ_CP009850.1_3204167_3206033_-	TIGR02517, Putative_type_II_secretion_system_protein_D, type II secretion system protein D	NA|244aa|down_8|NZ_CP009850.1_3206046_3206778_-	TIGR01713, Type_II_secretion_system_protein_C, type II secretion system protein C	NA|522aa|down_9|NZ_CP009850.1_3207078_3208644_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]
GCF_000784865.1_ASM78486v1	NZ_CP009850	UNVERIFIED_ORG: Enterobacter cloacae strain ECNIH4, complete genome	4	3630177-3630322	4	CRISPRCasFinder	no		cas3,RT,csa3,DinG,DEDDh,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL	Orphan	GAGAGGGAACAAACACTAAAAACGGCAACCGGGTTGCCGTTTTGCTTTTACCT	53	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,DinG,DEDDh,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL	NA,NA	NA|224aa|up_9|NZ_CP009850.1_3618404_3619076_-	PRK10247, PRK10247, putative ABC transporter ATP-binding protein YbbL; Provisional	NA|305aa|up_8|NZ_CP009850.1_3619212_3620127_+	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones]	NA|151aa|up_7|NZ_CP009850.1_3620123_3620576_+	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]	NA|137aa|up_6|NZ_CP009850.1_3620572_3620983_-	PRK10227, PRK10227, HTH-type transcriptional regulator CueR	NA|833aa|up_5|NZ_CP009850.1_3621091_3623590_+	PRK10671, copA, copper-exporting P-type ATPase CopA	NA|265aa|up_4|NZ_CP009850.1_3623640_3624435_+	COG3735, COG3735, Uncharacterized protein conserved in bacteria [Function unknown]	NA|160aa|up_3|NZ_CP009850.1_3624634_3625114_+	PRK10670, PRK10670, Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	NA|551aa|up_2|NZ_CP009850.1_3625203_3626856_-	PRK09558, ushA, bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed	NA|401aa|up_1|NZ_CP009850.1_3627020_3628223_+	cd17478, MFS_FsR, Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters	NA|559aa|up_0|NZ_CP009850.1_3628455_3630132_+	PRK10669, PRK10669, putative cation:proton antiport protein; Provisional	NA|321aa|down_0|NZ_CP009850.1_3631683_3632646_-	PRK00035, hemH, ferrochelatase; Reviewed	NA|215aa|down_1|NZ_CP009850.1_3632770_3633415_-	PRK00279, adk, adenylate kinase; Reviewed	NA|625aa|down_2|NZ_CP009850.1_3633609_3635484_-	PRK05218, PRK05218, heat shock protein 90; Provisional	NA|202aa|down_3|NZ_CP009850.1_3635594_3636200_-	PRK00076, recR, recombination protein RecR; Reviewed	NA|111aa|down_4|NZ_CP009850.1_3636199_3636532_-	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|642aa|down_5|NZ_CP009850.1_3636586_3638512_-	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated	NA|184aa|down_6|NZ_CP009850.1_3638600_3639152_-	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	NA|126aa|down_7|NZ_CP009850.1_3639304_3639682_-	PRK10527, PRK10527, DUF454 family protein	NA|176aa|down_8|NZ_CP009850.1_3639732_3640260_+	PRK10093, PRK10093, primosomal replication protein N''; Provisional	NA|62aa|down_9|NZ_CP009850.1_3640274_3640460_+	PRK11038, PRK11038, hypothetical protein; Provisional
