assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000784015.2_ASM78401v2	NZ_CP026044	Proteus mirabilis strain FDAARGOS_60 chromosome, complete genome	1	834680-834822	1	CRISPRCasFinder	no		csa3,cas3,c2c9_V-U4,DEDDh,DinG,PD-DExK,WYL	Orphan	CCACCTGTAAAATTGATATCACC	23	0	0	NA	NA	NA	2	2	Orphan	csa3,cas3,c2c9_V-U4,DEDDh,DinG,PD-DExK,WYL	NA,NA|68aa|down_0|NZ_CP026044.1_836533_836737_-,NA|49aa|down_1|NZ_CP026044.1_836737_836884_-,NA|143aa|down_7|NZ_CP026044.1_843433_843862_-,NA|74aa|down_8|NZ_CP026044.1_843929_844151_-	NA|251aa|up_9|NZ_CP026044.1_809555_810308_-	PRK05287, PRK05287, cell division protein ZapD	NA|205aa|up_8|NZ_CP026044.1_810310_810925_-	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|400aa|up_7|NZ_CP026044.1_811202_812402_-	PRK10573, PRK10573, protein transport protein HofC	NA|368aa|up_6|NZ_CP026044.1_812398_813502_-	PRK10436, PRK10436, hypothetical protein; Provisional	NA|148aa|up_5|NZ_CP026044.1_813600_814044_-	PRK10574, PRK10574, putative major pilin subunit; Provisional	NA|181aa|up_4|NZ_CP026044.1_814255_814798_+	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA|257aa|up_3|NZ_CP026044.1_815124_815895_+	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR	NA|889aa|up_2|NZ_CP026044.1_816058_818725_+	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|622aa|up_1|NZ_CP026044.1_818737_820603_+	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated	NA|476aa|up_0|NZ_CP026044.1_820804_822232_+	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed	NA|68aa|down_0|NZ_CP026044.1_836533_836737_-	NA	NA|49aa|down_1|NZ_CP026044.1_836737_836884_-	NA	NA|866aa|down_2|NZ_CP026044.1_837557_840155_+	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated	NA|124aa|down_3|NZ_CP026044.1_840325_840697_+	PRK05248, PRK05248, hypothetical protein; Provisional	NA|287aa|down_4|NZ_CP026044.1_840788_841649_+	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS	NA|208aa|down_5|NZ_CP026044.1_841817_842441_+	PRK09304, PRK09304, arginine exporter ArgO	NA|245aa|down_6|NZ_CP026044.1_842531_843266_+	PRK11087, PRK11087, oxidative stress defense protein; Provisional	NA|143aa|down_7|NZ_CP026044.1_843433_843862_-	NA	NA|74aa|down_8|NZ_CP026044.1_843929_844151_-	NA	NA|300aa|down_9|NZ_CP026044.1_844353_845253_-	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator
GCF_000784015.2_ASM78401v2	NZ_CP026044	Proteus mirabilis strain FDAARGOS_60 chromosome, complete genome	2	1208136-1208244	2	CRISPRCasFinder	no		csa3,cas3,c2c9_V-U4,DEDDh,DinG,PD-DExK,WYL	Orphan	AAATATCAACCCAAAGGCAATTAT	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,c2c9_V-U4,DEDDh,DinG,PD-DExK,WYL	NA|151aa|up_9|NZ_CP026044.1_1199822_1200275_+,NA|153aa|up_8|NZ_CP026044.1_1200334_1200793_+,NA|163aa|up_6|NZ_CP026044.1_1203181_1203670_+,NA|107aa|up_5|NZ_CP026044.1_1203682_1204003_+,NA|271aa|up_4|NZ_CP026044.1_1203971_1204784_+,NA|115aa|up_2|NZ_CP026044.1_1205475_1205820_+,NA|546aa|down_6|NZ_CP026044.1_1216424_1218062_+	NA|151aa|up_9|NZ_CP026044.1_1199822_1200275_+	NA	NA|153aa|up_8|NZ_CP026044.1_1200334_1200793_+	NA	NA|768aa|up_7|NZ_CP026044.1_1200875_1203179_+	COG5412, COG5412, Phage-related protein [Function unknown]	NA|163aa|up_6|NZ_CP026044.1_1203181_1203670_+	NA	NA|107aa|up_5|NZ_CP026044.1_1203682_1204003_+	NA	NA|271aa|up_4|NZ_CP026044.1_1203971_1204784_+	NA	NA|231aa|up_3|NZ_CP026044.1_1204786_1205479_+	pfam18352, Gp138_N, Phage protein Gp138 N-terminal domain	NA|115aa|up_2|NZ_CP026044.1_1205475_1205820_+	NA	NA|396aa|up_1|NZ_CP026044.1_1205812_1207000_+	pfam04865, Baseplate_J, Baseplate J-like protein	NA|219aa|up_0|NZ_CP026044.1_1206996_1207653_+	pfam11041, DUF2612, Protein of unknown function (DUF2612)	NA|60aa|down_0|NZ_CP026044.1_1208967_1209147_-	pfam10753, Toxin_GhoT_OrtT, Toxin GhoT_OrtT	NA|181aa|down_1|NZ_CP026044.1_1209715_1210258_+	pfam06041, DUF924, Bacterial protein of unknown function (DUF924)	NA|259aa|down_2|NZ_CP026044.1_1210373_1211150_-	COG3302, DmsC, DMSO reductase anchor subunit [General function prediction only]	NA|206aa|down_3|NZ_CP026044.1_1211153_1211771_-	TIGR02951, anaerobic_dimethyl_sulfoxide_reductase_subunit_B, DMSO reductase, iron-sulfur subunit	NA|811aa|down_4|NZ_CP026044.1_1211782_1214215_-	TIGR02166, Putative_dimethyl_sulfoxide_reductase_chain_YnfE, anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family	NA|419aa|down_5|NZ_CP026044.1_1214568_1215825_-	pfam00924, MS_channel, Mechanosensitive ion channel	NA|546aa|down_6|NZ_CP026044.1_1216424_1218062_+	NA	NA|193aa|down_7|NZ_CP026044.1_1218141_1218720_-	PRK10209, PRK10209, HdeD family acid-resistance protein	NA|286aa|down_8|NZ_CP026044.1_1218906_1219764_+	PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed	NA|187aa|down_9|NZ_CP026044.1_1219826_1220387_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins
GCF_000784015.2_ASM78401v2	NZ_CP026044	Proteus mirabilis strain FDAARGOS_60 chromosome, complete genome	3	1208376-1208549	3	CRISPRCasFinder	no		csa3,cas3,c2c9_V-U4,DEDDh,DinG,PD-DExK,WYL	Orphan	AAATATCAACCCAAAGGCAATTAT	24	0	0	NA	NA	NA	2	2	Orphan	csa3,cas3,c2c9_V-U4,DEDDh,DinG,PD-DExK,WYL	NA|151aa|up_9|NZ_CP026044.1_1199822_1200275_+,NA|153aa|up_8|NZ_CP026044.1_1200334_1200793_+,NA|163aa|up_6|NZ_CP026044.1_1203181_1203670_+,NA|107aa|up_5|NZ_CP026044.1_1203682_1204003_+,NA|271aa|up_4|NZ_CP026044.1_1203971_1204784_+,NA|115aa|up_2|NZ_CP026044.1_1205475_1205820_+,NA|546aa|down_6|NZ_CP026044.1_1216424_1218062_+	NA|151aa|up_9|NZ_CP026044.1_1199822_1200275_+	NA	NA|153aa|up_8|NZ_CP026044.1_1200334_1200793_+	NA	NA|768aa|up_7|NZ_CP026044.1_1200875_1203179_+	COG5412, COG5412, Phage-related protein [Function unknown]	NA|163aa|up_6|NZ_CP026044.1_1203181_1203670_+	NA	NA|107aa|up_5|NZ_CP026044.1_1203682_1204003_+	NA	NA|271aa|up_4|NZ_CP026044.1_1203971_1204784_+	NA	NA|231aa|up_3|NZ_CP026044.1_1204786_1205479_+	pfam18352, Gp138_N, Phage protein Gp138 N-terminal domain	NA|115aa|up_2|NZ_CP026044.1_1205475_1205820_+	NA	NA|396aa|up_1|NZ_CP026044.1_1205812_1207000_+	pfam04865, Baseplate_J, Baseplate J-like protein	NA|219aa|up_0|NZ_CP026044.1_1206996_1207653_+	pfam11041, DUF2612, Protein of unknown function (DUF2612)	NA|60aa|down_0|NZ_CP026044.1_1208967_1209147_-	pfam10753, Toxin_GhoT_OrtT, Toxin GhoT_OrtT	NA|181aa|down_1|NZ_CP026044.1_1209715_1210258_+	pfam06041, DUF924, Bacterial protein of unknown function (DUF924)	NA|259aa|down_2|NZ_CP026044.1_1210373_1211150_-	COG3302, DmsC, DMSO reductase anchor subunit [General function prediction only]	NA|206aa|down_3|NZ_CP026044.1_1211153_1211771_-	TIGR02951, anaerobic_dimethyl_sulfoxide_reductase_subunit_B, DMSO reductase, iron-sulfur subunit	NA|811aa|down_4|NZ_CP026044.1_1211782_1214215_-	TIGR02166, Putative_dimethyl_sulfoxide_reductase_chain_YnfE, anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family	NA|419aa|down_5|NZ_CP026044.1_1214568_1215825_-	pfam00924, MS_channel, Mechanosensitive ion channel	NA|546aa|down_6|NZ_CP026044.1_1216424_1218062_+	NA	NA|193aa|down_7|NZ_CP026044.1_1218141_1218720_-	PRK10209, PRK10209, HdeD family acid-resistance protein	NA|286aa|down_8|NZ_CP026044.1_1218906_1219764_+	PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed	NA|187aa|down_9|NZ_CP026044.1_1219826_1220387_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins
GCF_000784015.2_ASM78401v2	NZ_CP026044	Proteus mirabilis strain FDAARGOS_60 chromosome, complete genome	4	3231267-3231466	1,4	CRT,CRISPRCasFinder	no		csa3,cas3,c2c9_V-U4,DEDDh,DinG,PD-DExK,WYL	Orphan	CGTGCTTGTTCAGCTTCTAGTTGCGCTTGACG,CTTGTTCAGCTTCAAGTTGCGCTTGACG	32,28	3	6	3231299-3231329|3231362-3231380|3231362-3231380|3231362-3231380|3231362-3231380|3231413-3231434	NZ_CP026044.1_3231185-3231215|NZ_CP026044.1_3230906-3230924|NZ_CP026044.1_3231020-3231038|NZ_CP026044.1_3231134-3231152|NZ_CP026044.1_3231248-3231266|NZ_CP026044.1_3231185-3231206	NA:NA	3,1	3	Orphan	csa3,cas3,c2c9_V-U4,DEDDh,DinG,PD-DExK,WYL	NA,NA	NA|283aa|up_9|NZ_CP026044.1_3220280_3221129_+	PRK10973, PRK10973, sn-glycerol-3-phosphate ABC transporter permease UgpE	NA|365aa|up_8|NZ_CP026044.1_3221130_3222225_+	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|251aa|up_7|NZ_CP026044.1_3222714_3223467_+	cd07334, M48C_loiP_like, Peptidase M48C Ste24p loiP-like, integral membrane protein	NA|159aa|up_6|NZ_CP026044.1_3223506_3223983_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|396aa|up_5|NZ_CP026044.1_3224097_3225285_+	cd17474, MFS_YfmO_like, Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily	NA|139aa|up_4|NZ_CP026044.1_3225296_3225713_+	pfam12568, DUF3749, Acetyltransferase (GNAT) domain	NA|381aa|up_3|NZ_CP026044.1_3225694_3226837_-	pfam02595, Gly_kinase, Glycerate kinase family	NA|285aa|up_2|NZ_CP026044.1_3226931_3227786_-	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed	NA|326aa|up_1|NZ_CP026044.1_3228127_3229105_-	PRK11026, ftsX, cell division ABC transporter subunit FtsX; Provisional	NA|222aa|up_0|NZ_CP026044.1_3229097_3229763_-	PRK10908, PRK10908, cell division ATP-binding protein FtsE	NA|195aa|down_0|NZ_CP026044.1_3231834_3232419_+	PRK10909, rsmD, 16S rRNA m(2)G966-methyltransferase; Provisional	NA|98aa|down_1|NZ_CP026044.1_3232436_3232730_+	PRK10910, PRK10910, DUF1145 family protein	NA|135aa|down_2|NZ_CP026044.1_3232793_3233198_-	pfam10694, DUF2500, Protein of unknown function (DUF2500)	NA|209aa|down_3|NZ_CP026044.1_3233344_3233971_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|797aa|down_4|NZ_CP026044.1_3234141_3236532_+	PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional	NA|1045aa|down_5|NZ_CP026044.1_3236618_3239753_-	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family	NA|380aa|down_6|NZ_CP026044.1_3239778_3240918_-	NF000247, MexA, MexA family multidrug efflux RND transporter periplasmic adaptor subunit	NA|139aa|down_7|NZ_CP026044.1_3242888_3243305_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|85aa|down_8|NZ_CP026044.1_3243372_3243627_-	PRK00299, PRK00299, sulfurtransferase TusA	NA|225aa|down_9|NZ_CP026044.1_3243837_3244512_+	PRK11212, PRK11212, 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter
GCF_000784015.2_ASM78401v2	NZ_CP026044	Proteus mirabilis strain FDAARGOS_60 chromosome, complete genome	5	3516170-3516265	5	CRISPRCasFinder	no		csa3,cas3,c2c9_V-U4,DEDDh,DinG,PD-DExK,WYL	Orphan	TTAGCACTTATTTTTCTAAGCTAT	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,c2c9_V-U4,DEDDh,DinG,PD-DExK,WYL	NA|83aa|up_1|NZ_CP026044.1_3515599_3515848_+,NA	NA|377aa|up_9|NZ_CP026044.1_3504425_3505556_-	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]	NA|353aa|up_8|NZ_CP026044.1_3505685_3506744_-	PRK11638, PRK11638, ECA polysaccharide chain length modulation protein	NA|364aa|up_7|NZ_CP026044.1_3506767_3507859_-	PRK15119, PRK15119, UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase	NA|420aa|up_6|NZ_CP026044.1_3508253_3509513_-	PRK09376, rho, transcription termination factor Rho; Provisional	NA|109aa|up_5|NZ_CP026044.1_3510074_3510401_-	PRK09381, trxA, thioredoxin TrxA	NA|433aa|up_4|NZ_CP026044.1_3510520_3511819_+	PRK04837, PRK04837, ATP-dependent RNA helicase RhlB; Provisional	NA|503aa|up_3|NZ_CP026044.1_3511822_3513331_+	PRK11031, PRK11031, guanosine-5'-triphosphate,3'-diphosphate diphosphatase	NA|674aa|up_2|NZ_CP026044.1_3513405_3515427_-	PRK10919, PRK10919, ATP-dependent DNA helicase Rep; Provisional	NA|83aa|up_1|NZ_CP026044.1_3515599_3515848_+	NA	NA|90aa|up_0|NZ_CP026044.1_3515848_3516118_+	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ	NA|492aa|down_0|NZ_CP026044.1_3516376_3517852_-	PRK05225, PRK05225, ketol-acid reductoisomerase; Validated	NA|296aa|down_1|NZ_CP026044.1_3518024_3518912_+	PRK11716, PRK11716, HTH-type transcriptional activator IlvY	NA|525aa|down_2|NZ_CP026044.1_3518897_3520472_-	PRK09224, PRK09224, threonine ammonia-lyase IlvA	NA|617aa|down_3|NZ_CP026044.1_3520475_3522326_-	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional	NA|309aa|down_4|NZ_CP026044.1_3522398_3523325_-	PRK06606, PRK06606, branched-chain amino acid transaminase	NA|93aa|down_5|NZ_CP026044.1_3523335_3523614_-	PRK11152, ilvM, acetolactate synthase 2 small subunit	NA|550aa|down_6|NZ_CP026044.1_3523610_3525260_-	PRK08978, PRK08978, acetolactate synthase 2 catalytic subunit; Reviewed	NA|34aa|down_7|NZ_CP026044.1_3525389_3525491_-	PRK10424, PRK10424, ilv operon leader peptide	NA|511aa|down_8|NZ_CP026044.1_3525935_3527468_+	PRK09862, PRK09862, ATP-dependent protease	NA|113aa|down_9|NZ_CP026044.1_3527515_3527854_-	PRK11027, PRK11027, hypothetical protein; Provisional
