assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000783875.2_ASM78387v2	NZ_CP026051	Proteus mirabilis strain FDAARGOS_67 chromosome, complete genome	1	946311-946644	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,c2c9_V-U4,DinG,csa3,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,PD-DExK	Type I-E	CGGTTCATCCCCGTATACACGGGGAACAC,CGGTTCATCCCCGTATACACGGGGAACAC,CGGTTCATCCCCGTATACACGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	5,5,4	5	TypeI-E	cas3,c2c9_V-U4,DinG,csa3,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,PD-DExK	NA,NA	NA|221aa|up_9|NZ_CP026051.1_935046_935709_-	PRK11587, PRK11587, putative phosphatase; Provisional	NA|165aa|up_8|NZ_CP026051.1_935743_936238_-	PRK05445, PRK05445, YfbU family protein	NA|152aa|up_7|NZ_CP026051.1_936378_936834_-	PRK01816, PRK01816, hypothetical protein; Provisional	NA|401aa|up_6|NZ_CP026051.1_937225_938428_+	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|715aa|up_5|NZ_CP026051.1_938505_940650_+	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed	NA|48aa|up_4|NZ_CP026051.1_940985_941129_+	pfam01848, HOK_GEF, Hok/gef family	NA|48aa|up_3|NZ_CP026051.1_941526_941670_+	pfam01848, HOK_GEF, Hok/gef family	NA|48aa|up_2|NZ_CP026051.1_942067_942211_+	pfam01848, HOK_GEF, Hok/gef family	NA|800aa|up_1|NZ_CP026051.1_942441_944841_+	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family	NA|408aa|up_0|NZ_CP026051.1_944918_946142_-	PRK13340, PRK13340, alanine racemase; Reviewed	cas2|99aa|down_0|NZ_CP026051.1_946702_946999_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|NZ_CP026051.1_947001_947922_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|226aa|down_2|NZ_CP026051.1_947922_948600_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|246aa|down_3|NZ_CP026051.1_948599_949337_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|345aa|down_4|NZ_CP026051.1_949349_950384_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|196aa|down_5|NZ_CP026051.1_950423_951011_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|533aa|down_6|NZ_CP026051.1_950997_952596_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|898aa|down_7|NZ_CP026051.1_952592_955286_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|419aa|down_8|NZ_CP026051.1_956179_957436_-	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed	NA|96aa|down_9|NZ_CP026051.1_957446_957734_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)
GCF_000783875.2_ASM78387v2	NZ_CP026051	Proteus mirabilis strain FDAARGOS_67 chromosome, complete genome	2	955532-956049	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,c2c9_V-U4,DinG,csa3,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,PD-DExK	Type I-E	CGGTTCATCCCCGTGCATACGGGGAACAC,CGGTTCATCCCCGTGCATACGGGGAACAC,CGGTTCATCCCCGTGCATACGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	8,8,8	8	TypeI-E	cas3,c2c9_V-U4,DinG,csa3,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,PD-DExK	NA,NA	NA|800aa|up_9|NZ_CP026051.1_942441_944841_+	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family	NA|408aa|up_8|NZ_CP026051.1_944918_946142_-	PRK13340, PRK13340, alanine racemase; Reviewed	cas2|99aa|up_7|NZ_CP026051.1_946702_946999_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|up_6|NZ_CP026051.1_947001_947922_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|226aa|up_5|NZ_CP026051.1_947922_948600_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|246aa|up_4|NZ_CP026051.1_948599_949337_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|345aa|up_3|NZ_CP026051.1_949349_950384_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|196aa|up_2|NZ_CP026051.1_950423_951011_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|533aa|up_1|NZ_CP026051.1_950997_952596_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|898aa|up_0|NZ_CP026051.1_952592_955286_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|419aa|down_0|NZ_CP026051.1_956179_957436_-	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed	NA|96aa|down_1|NZ_CP026051.1_957446_957734_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|148aa|down_2|NZ_CP026051.1_957763_958207_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|349aa|down_3|NZ_CP026051.1_958433_959480_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|181aa|down_4|NZ_CP026051.1_959476_960019_-	PRK15393, PRK15393, NUDIX hydrolase YfcD; Provisional	NA|205aa|down_5|NZ_CP026051.1_960215_960830_+	PRK13972, PRK13972, GSH-dependent disulfide bond oxidoreductase; Provisional	NA|302aa|down_6|NZ_CP026051.1_960894_961800_+	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|194aa|down_7|NZ_CP026051.1_961819_962401_-	PRK06029, PRK06029, UbiX family flavin prenyltransferase	NA|506aa|down_8|NZ_CP026051.1_962522_964040_-	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional	NA|164aa|down_9|NZ_CP026051.1_964070_964562_-	PRK10845, PRK10845, colicin V production protein; Provisional
GCF_000783875.2_ASM78387v2	NZ_CP026051	Proteus mirabilis strain FDAARGOS_67 chromosome, complete genome	3	1226678-1226820	3	CRISPRCasFinder	no		cas3,c2c9_V-U4,DinG,csa3,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,PD-DExK	Orphan	GGTGATATCAATTTCACAGGTGG	23	0	0	NA	NA	NA	2	2	Orphan	cas3,c2c9_V-U4,DinG,csa3,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,PD-DExK	NA|74aa|up_8|NZ_CP026051.1_1217347_1217569_+,NA|143aa|up_7|NZ_CP026051.1_1217636_1218065_+,NA|49aa|up_1|NZ_CP026051.1_1224614_1224761_+,NA|76aa|up_0|NZ_CP026051.1_1224761_1224989_+,NA	NA|300aa|up_9|NZ_CP026051.1_1216245_1217145_+	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator	NA|74aa|up_8|NZ_CP026051.1_1217347_1217569_+	NA	NA|143aa|up_7|NZ_CP026051.1_1217636_1218065_+	NA	NA|245aa|up_6|NZ_CP026051.1_1218232_1218967_-	PRK11087, PRK11087, oxidative stress defense protein; Provisional	NA|208aa|up_5|NZ_CP026051.1_1219057_1219681_-	PRK09304, PRK09304, arginine exporter ArgO	NA|287aa|up_4|NZ_CP026051.1_1219849_1220710_-	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS	NA|124aa|up_3|NZ_CP026051.1_1220801_1221173_-	PRK05248, PRK05248, hypothetical protein; Provisional	NA|866aa|up_2|NZ_CP026051.1_1221343_1223941_-	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated	NA|49aa|up_1|NZ_CP026051.1_1224614_1224761_+	NA	NA|76aa|up_0|NZ_CP026051.1_1224761_1224989_+	NA	NA|476aa|down_0|NZ_CP026051.1_1239271_1240699_-	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed	NA|624aa|down_1|NZ_CP026051.1_1240900_1242772_-	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated	NA|889aa|down_2|NZ_CP026051.1_1242784_1245451_-	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|257aa|down_3|NZ_CP026051.1_1245614_1246385_-	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR	NA|181aa|down_4|NZ_CP026051.1_1246711_1247254_-	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA|148aa|down_5|NZ_CP026051.1_1247464_1247908_+	PRK10574, PRK10574, putative major pilin subunit; Provisional	NA|368aa|down_6|NZ_CP026051.1_1248006_1249110_+	PRK10436, PRK10436, hypothetical protein; Provisional	NA|400aa|down_7|NZ_CP026051.1_1249106_1250306_+	PRK10573, PRK10573, protein transport protein HofC	NA|205aa|down_8|NZ_CP026051.1_1250583_1251198_+	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|251aa|down_9|NZ_CP026051.1_1251200_1251953_+	PRK05287, PRK05287, cell division protein ZapD
GCF_000783875.2_ASM78387v2	NZ_CP026051	Proteus mirabilis strain FDAARGOS_67 chromosome, complete genome	4	1716535-1716803	3	PILER-CR	no		cas3,c2c9_V-U4,DinG,csa3,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,PD-DExK	Orphan	ACTTGACCACTTTTATT	17	1	1	1716741-1716786	NZ_CP026051.1_1716804-1716849	NA	4	4	Orphan	cas3,c2c9_V-U4,DinG,csa3,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,PD-DExK	NA|118aa|up_3|NZ_CP026051.1_1713303_1713657_-,NA|88aa|down_0|NZ_CP026051.1_1717312_1717576_-	NA|261aa|up_9|NZ_CP026051.1_1705167_1705950_-	PRK11449, PRK11449, metal-dependent hydrolase	NA|354aa|up_8|NZ_CP026051.1_1705946_1707008_-	COG4667, COG4667, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|116aa|up_7|NZ_CP026051.1_1707104_1707452_-	PRK10568, PRK10568, molecular chaperone OsmY	NA|530aa|up_6|NZ_CP026051.1_1707860_1709450_-	PRK00741, prfC, peptide chain release factor 3; Provisional	NA|476aa|up_5|NZ_CP026051.1_1710209_1711637_-	pfam10117, McrBC, McrBC 5-methylcytosine restriction system component	NA|548aa|up_4|NZ_CP026051.1_1711640_1713284_-	PRK11331, PRK11331, 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional	NA|118aa|up_3|NZ_CP026051.1_1713303_1713657_-	NA	NA|149aa|up_2|NZ_CP026051.1_1714427_1714874_-	PRK09491, rimI, ribosomal-protein-alanine N-acetyltransferase; Provisional	NA|137aa|up_1|NZ_CP026051.1_1714842_1715253_-	PRK06856, PRK06856, DNA polymerase III subunit psi; Validated	NA|338aa|up_0|NZ_CP026051.1_1715382_1716396_+	PRK09489, rsmC, 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	NA|88aa|down_0|NZ_CP026051.1_1717312_1717576_-	NA	NA|181aa|down_1|NZ_CP026051.1_1717770_1718313_-	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|546aa|down_2|NZ_CP026051.1_1718309_1719947_-	COG1283, NptA, Na+/phosphate symporter [Inorganic ion transport and metabolism]	NA|480aa|down_3|NZ_CP026051.1_1720375_1721815_-	PRK10518, PRK10518, alkaline phosphatase; Provisional	NA|515aa|down_4|NZ_CP026051.1_1722024_1723569_-	PRK10439, PRK10439, enterobactin/ferric enterobactin esterase; Provisional	NA|380aa|down_5|NZ_CP026051.1_1723754_1724894_-	cd06259, YdcF-like, YdcF-like	NA|415aa|down_6|NZ_CP026051.1_1725211_1726456_-	PRK08099, PRK08099, multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR	NA|464aa|down_7|NZ_CP026051.1_1726467_1727859_-	PRK11823, PRK11823, DNA repair protein RadA; Provisional	NA|326aa|down_8|NZ_CP026051.1_1727892_1728870_-	PRK11133, serB, phosphoserine phosphatase; Provisional	NA|231aa|down_9|NZ_CP026051.1_1728979_1729672_+	PRK11246, PRK11246, YtjB family periplasmic protein
GCF_000783875.2_ASM78387v2	NZ_CP026051	Proteus mirabilis strain FDAARGOS_67 chromosome, complete genome	5	2603383-2603474	4	CRISPRCasFinder	no		cas3,c2c9_V-U4,DinG,csa3,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,PD-DExK	Orphan	ATAGCTTAGAAAAATAAGTACTAA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,c2c9_V-U4,DinG,csa3,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,PD-DExK	NA,NA|83aa|down_1|NZ_CP026051.1_2603795_2604044_-	NA|113aa|up_9|NZ_CP026051.1_2591793_2592132_+	PRK11027, PRK11027, hypothetical protein; Provisional	NA|511aa|up_8|NZ_CP026051.1_2592179_2593712_-	PRK09862, PRK09862, ATP-dependent protease	NA|34aa|up_7|NZ_CP026051.1_2594156_2594258_+	PRK10424, PRK10424, ilv operon leader peptide	NA|550aa|up_6|NZ_CP026051.1_2594387_2596037_+	PRK08978, PRK08978, acetolactate synthase 2 catalytic subunit; Reviewed	NA|93aa|up_5|NZ_CP026051.1_2596033_2596312_+	PRK11152, ilvM, acetolactate synthase 2 small subunit	NA|309aa|up_4|NZ_CP026051.1_2596322_2597249_+	PRK06606, PRK06606, branched-chain amino acid transaminase	NA|617aa|up_3|NZ_CP026051.1_2597321_2599172_+	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional	NA|525aa|up_2|NZ_CP026051.1_2599175_2600750_+	PRK09224, PRK09224, threonine ammonia-lyase IlvA	NA|296aa|up_1|NZ_CP026051.1_2600735_2601623_-	PRK11716, PRK11716, HTH-type transcriptional activator IlvY	NA|492aa|up_0|NZ_CP026051.1_2601795_2603271_+	PRK05225, PRK05225, ketol-acid reductoisomerase; Validated	NA|90aa|down_0|NZ_CP026051.1_2603525_2603795_-	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ	NA|83aa|down_1|NZ_CP026051.1_2603795_2604044_-	NA	NA|674aa|down_2|NZ_CP026051.1_2604216_2606238_+	PRK10919, PRK10919, ATP-dependent DNA helicase Rep; Provisional	NA|503aa|down_3|NZ_CP026051.1_2606312_2607821_-	PRK11031, PRK11031, guanosine-5'-triphosphate,3'-diphosphate diphosphatase	NA|433aa|down_4|NZ_CP026051.1_2607824_2609123_-	PRK04837, PRK04837, ATP-dependent RNA helicase RhlB; Provisional	NA|109aa|down_5|NZ_CP026051.1_2609242_2609569_+	PRK09381, trxA, thioredoxin TrxA	NA|420aa|down_6|NZ_CP026051.1_2610130_2611390_+	PRK09376, rho, transcription termination factor Rho; Provisional	NA|364aa|down_7|NZ_CP026051.1_2611784_2612876_+	PRK15119, PRK15119, UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase	NA|353aa|down_8|NZ_CP026051.1_2612899_2613958_+	PRK11638, PRK11638, ECA polysaccharide chain length modulation protein	NA|377aa|down_9|NZ_CP026051.1_2614087_2615218_+	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
