assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000783575.2_ASM78357v2	NZ_CP026062	Proteus mirabilis strain FDAARGOS_81 chromosome, complete genome	1	1056305-1056447	1	CRISPRCasFinder	no		cas3,c2c9_V-U4,RT,csa3,DEDDh,DinG,PD-DExK,WYL	Orphan	CCACCTGTAAAATTGATATCACC	23	0	0	NA	NA	NA	2	2	Orphan	cas3,c2c9_V-U4,RT,csa3,DEDDh,DinG,PD-DExK,WYL	NA,NA|76aa|down_1|NZ_CP026062.1_1058136_1058364_-,NA|49aa|down_2|NZ_CP026062.1_1058364_1058511_-,NA|51aa|down_3|NZ_CP026062.1_1058806_1058959_+,NA|143aa|down_9|NZ_CP026062.1_1065060_1065489_-	NA|251aa|up_9|NZ_CP026062.1_1033008_1033761_-	PRK05287, PRK05287, cell division protein ZapD	NA|205aa|up_8|NZ_CP026062.1_1033763_1034378_-	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|400aa|up_7|NZ_CP026062.1_1034655_1035855_-	PRK10573, PRK10573, protein transport protein HofC	NA|368aa|up_6|NZ_CP026062.1_1035851_1036955_-	PRK10436, PRK10436, hypothetical protein; Provisional	NA|148aa|up_5|NZ_CP026062.1_1037054_1037498_-	PRK10574, PRK10574, putative major pilin subunit; Provisional	NA|181aa|up_4|NZ_CP026062.1_1037708_1038251_+	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA|257aa|up_3|NZ_CP026062.1_1038577_1039348_+	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR	NA|889aa|up_2|NZ_CP026062.1_1039511_1042178_+	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|510aa|up_1|NZ_CP026062.1_1042190_1043720_+	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated	NA|476aa|up_0|NZ_CP026062.1_1043921_1045349_+	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed	NA|268aa|down_0|NZ_CP026062.1_1057127_1057931_-	NF012221, MARTX_Nterm, MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin RtxA	NA|76aa|down_1|NZ_CP026062.1_1058136_1058364_-	NA	NA|49aa|down_2|NZ_CP026062.1_1058364_1058511_-	NA	NA|51aa|down_3|NZ_CP026062.1_1058806_1058959_+	NA	NA|866aa|down_4|NZ_CP026062.1_1059184_1061782_+	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated	NA|124aa|down_5|NZ_CP026062.1_1061952_1062324_+	PRK05248, PRK05248, hypothetical protein; Provisional	NA|287aa|down_6|NZ_CP026062.1_1062415_1063276_+	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS	NA|208aa|down_7|NZ_CP026062.1_1063444_1064068_+	PRK09304, PRK09304, arginine exporter ArgO	NA|245aa|down_8|NZ_CP026062.1_1064158_1064893_+	PRK11087, PRK11087, oxidative stress defense protein; Provisional	NA|143aa|down_9|NZ_CP026062.1_1065060_1065489_-	NA
GCF_000783575.2_ASM78357v2	NZ_CP026062	Proteus mirabilis strain FDAARGOS_81 chromosome, complete genome	2	3545881-3545962	2	CRISPRCasFinder	no	c2c9_V-U4	cas3,c2c9_V-U4,RT,csa3,DEDDh,DinG,PD-DExK,WYL	Type V-U4	CTTGTTCAGCTTCAAGTTGCGCTTGACG	28	0	0	NA	NA	NA	1	1	TypeV-U4	cas3,c2c9_V-U4,RT,csa3,DEDDh,DinG,PD-DExK,WYL	NA,NA	NA|283aa|up_9|NZ_CP026062.1_3534221_3535070_+	PRK10973, PRK10973, sn-glycerol-3-phosphate ABC transporter permease UgpE	NA|365aa|up_8|NZ_CP026062.1_3535071_3536166_+	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|251aa|up_7|NZ_CP026062.1_3536655_3537408_+	cd07334, M48C_loiP_like, Peptidase M48C Ste24p loiP-like, integral membrane protein	NA|159aa|up_6|NZ_CP026062.1_3537447_3537924_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|396aa|up_5|NZ_CP026062.1_3538037_3539225_+	cd17474, MFS_YfmO_like, Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily	NA|139aa|up_4|NZ_CP026062.1_3539236_3539653_+	pfam12568, DUF3749, Acetyltransferase (GNAT) domain	NA|381aa|up_3|NZ_CP026062.1_3539634_3540777_-	pfam02595, Gly_kinase, Glycerate kinase family	NA|285aa|up_2|NZ_CP026062.1_3540871_3541726_-	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed	NA|326aa|up_1|NZ_CP026062.1_3542509_3543487_-	PRK11026, ftsX, cell division ABC transporter subunit FtsX; Provisional	NA|222aa|up_0|NZ_CP026062.1_3543479_3544145_-	PRK10908, PRK10908, cell division ATP-binding protein FtsE	NA|195aa|down_0|NZ_CP026062.1_3546330_3546915_+	PRK10909, rsmD, 16S rRNA m(2)G966-methyltransferase; Provisional	NA|98aa|down_1|NZ_CP026062.1_3546932_3547226_+	PRK10910, PRK10910, DUF1145 family protein	NA|135aa|down_2|NZ_CP026062.1_3547289_3547694_-	pfam10694, DUF2500, Protein of unknown function (DUF2500)	NA|209aa|down_3|NZ_CP026062.1_3547840_3548467_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|797aa|down_4|NZ_CP026062.1_3548637_3551028_+	PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional	NA|1045aa|down_5|NZ_CP026062.1_3551114_3554249_-	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family	NA|380aa|down_6|NZ_CP026062.1_3554274_3555414_-	NF000247, MexA, MexA family multidrug efflux RND transporter periplasmic adaptor subunit	c2c9_V-U4|403aa|down_7|NZ_CP026062.1_3556157_3557366_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|85aa|down_8|NZ_CP026062.1_3557872_3558127_-	PRK00299, PRK00299, sulfurtransferase TusA	NA|225aa|down_9|NZ_CP026062.1_3558337_3559012_+	PRK11212, PRK11212, 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter
GCF_000783575.2_ASM78357v2	NZ_CP026062	Proteus mirabilis strain FDAARGOS_81 chromosome, complete genome	3	3851019-3851114	3	CRISPRCasFinder	no		cas3,c2c9_V-U4,RT,csa3,DEDDh,DinG,PD-DExK,WYL	Orphan	TTAGCACTTATTTTTCTAAGCTAT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,c2c9_V-U4,RT,csa3,DEDDh,DinG,PD-DExK,WYL	NA|83aa|up_1|NZ_CP026062.1_3850448_3850697_+,NA	NA|377aa|up_9|NZ_CP026062.1_3839261_3840392_-	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]	NA|353aa|up_8|NZ_CP026062.1_3840521_3841580_-	PRK11638, PRK11638, ECA polysaccharide chain length modulation protein	NA|364aa|up_7|NZ_CP026062.1_3841603_3842695_-	PRK15119, PRK15119, UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase	NA|420aa|up_6|NZ_CP026062.1_3843089_3844349_-	PRK09376, rho, transcription termination factor Rho; Provisional	NA|109aa|up_5|NZ_CP026062.1_3844923_3845250_-	PRK09381, trxA, thioredoxin TrxA	NA|433aa|up_4|NZ_CP026062.1_3845369_3846668_+	PRK04837, PRK04837, ATP-dependent RNA helicase RhlB; Provisional	NA|503aa|up_3|NZ_CP026062.1_3846671_3848180_+	PRK11031, PRK11031, guanosine-5'-triphosphate,3'-diphosphate diphosphatase	NA|674aa|up_2|NZ_CP026062.1_3848254_3850276_-	PRK10919, PRK10919, ATP-dependent DNA helicase Rep; Provisional	NA|83aa|up_1|NZ_CP026062.1_3850448_3850697_+	NA	NA|90aa|up_0|NZ_CP026062.1_3850697_3850967_+	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ	NA|492aa|down_0|NZ_CP026062.1_3851225_3852701_-	PRK05225, PRK05225, ketol-acid reductoisomerase; Validated	NA|296aa|down_1|NZ_CP026062.1_3852873_3853761_+	PRK11716, PRK11716, HTH-type transcriptional activator IlvY	NA|525aa|down_2|NZ_CP026062.1_3853746_3855321_-	PRK09224, PRK09224, threonine ammonia-lyase IlvA	NA|617aa|down_3|NZ_CP026062.1_3855324_3857175_-	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional	NA|309aa|down_4|NZ_CP026062.1_3857247_3858174_-	PRK06606, PRK06606, branched-chain amino acid transaminase	NA|93aa|down_5|NZ_CP026062.1_3858184_3858463_-	PRK11152, ilvM, acetolactate synthase 2 small subunit	NA|550aa|down_6|NZ_CP026062.1_3858459_3860109_-	PRK08978, PRK08978, acetolactate synthase 2 catalytic subunit; Reviewed	NA|34aa|down_7|NZ_CP026062.1_3860238_3860340_-	PRK10424, PRK10424, ilv operon leader peptide	NA|511aa|down_8|NZ_CP026062.1_3860784_3862317_+	PRK09862, PRK09862, ATP-dependent protease	NA|113aa|down_9|NZ_CP026062.1_3862365_3862704_-	PRK11027, PRK11027, hypothetical protein; Provisional
