assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000770215.1_ASM77021v1	NZ_CP009616	Mycobacterium abscessus strain 4529, complete genome	1	566786-566914	1	CRISPRCasFinder	no		csa3,cas3,WYL,cas4,DEDDh,DinG	Orphan	TTCCCGTGGTGGCTCCGATAGCGGCTCGCGGGGTGGTTGGGGCGA	45	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA|476aa|up_5|NZ_CP009616.1_560316_561744_-,NA|200aa|down_5|NZ_CP009616.1_577515_578115_+	NA|836aa|up_9|NZ_CP009616.1_554423_556931_-	cd16025, PAS_like, Bacterial Arylsulfatase of Pseudomonas aeruginosa and related proteins	NA|268aa|up_8|NZ_CP009616.1_557094_557898_-	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]	NA|310aa|up_7|NZ_CP009616.1_557987_558917_-	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1	NA|432aa|up_6|NZ_CP009616.1_558961_560257_-	cd14792, GH27, glycosyl hydrolase family 27 (GH27)	NA|476aa|up_5|NZ_CP009616.1_560316_561744_-	NA	NA|127aa|up_4|NZ_CP009616.1_561855_562236_+	pfam05423, Mycobact_memb, Mycobacterium membrane protein	NA|300aa|up_3|NZ_CP009616.1_562225_563125_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|219aa|up_2|NZ_CP009616.1_563220_563877_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|222aa|up_1|NZ_CP009616.1_563920_564586_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|190aa|up_0|NZ_CP009616.1_564636_565206_+	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed	NA|447aa|down_0|NZ_CP009616.1_567117_568458_+	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|428aa|down_1|NZ_CP009616.1_568542_569826_-	PRK09265, PRK09265, aminotransferase AlaT; Validated	NA|1011aa|down_2|NZ_CP009616.1_569860_572893_-	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|814aa|down_3|NZ_CP009616.1_573051_575493_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|607aa|down_4|NZ_CP009616.1_575513_577334_-	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|200aa|down_5|NZ_CP009616.1_577515_578115_+	NA	NA|128aa|down_6|NZ_CP009616.1_578127_578511_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|308aa|down_7|NZ_CP009616.1_578591_579515_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|121aa|down_8|NZ_CP009616.1_579511_579874_-	pfam03965, Penicillinase_R, Penicillinase repressor	NA|294aa|down_9|NZ_CP009616.1_579891_580773_-	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]
GCF_000770215.1_ASM77021v1	NZ_CP009616	Mycobacterium abscessus strain 4529, complete genome	2	3793357-3793444	2	CRISPRCasFinder	no	csa3	csa3,cas3,WYL,cas4,DEDDh,DinG	Type I-A	CCAGCCACCGCACACGCCGTTGTAGCAGCCG	31	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA,NA|194aa|down_9|NZ_CP009616.1_3802621_3803203_-	NA|402aa|up_9|NZ_CP009616.1_3782694_3783900_+	PRK03858, PRK03858, DNA polymerase IV; Validated	NA|261aa|up_8|NZ_CP009616.1_3783926_3784709_-	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains	NA|249aa|up_7|NZ_CP009616.1_3784834_3785581_+	PRK02101, PRK02101, peroxide stress protein YaaA	NA|597aa|up_6|NZ_CP009616.1_3785570_3787361_-	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|145aa|up_5|NZ_CP009616.1_3787454_3787889_-	pfam05610, DUF779, Protein of unknown function (DUF779)	NA|507aa|up_4|NZ_CP009616.1_3787869_3789390_-	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like	NA|52aa|up_3|NZ_CP009616.1_3789465_3789621_-	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|671aa|up_2|NZ_CP009616.1_3789781_3791794_+	cd06179, MFS_TRI12_like, Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters	NA|199aa|up_1|NZ_CP009616.1_3791744_3792341_-	COG3226, COG3226, Uncharacterized protein conserved in bacteria [Function unknown]	NA|307aa|up_0|NZ_CP009616.1_3792399_3793320_+	TIGR03560, F420_Rv1855c, probable F420-dependent oxidoreductase, Rv1855c family	NA|148aa|down_0|NZ_CP009616.1_3793728_3794172_-	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport	NA|379aa|down_1|NZ_CP009616.1_3794208_3795345_-	pfam03583, LIP, Secretory lipase	NA|72aa|down_2|NZ_CP009616.1_3795367_3795583_-	pfam14013, MT0933_antitox, MT0933-like antitoxin protein	NA|278aa|down_3|NZ_CP009616.1_3795637_3796471_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|801aa|down_4|NZ_CP009616.1_3796500_3798903_-	cd02609, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporter, similar to uncharacterized Streptococcus pneumoniae exported protein 7, Exp7	NA|226aa|down_5|NZ_CP009616.1_3799020_3799698_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|367aa|down_6|NZ_CP009616.1_3799694_3800795_-	cd16283, RomA-like_MBL-fold, Enterobacter cloacae RomA and related proteins; MBL-fold metallo hydrolase domain	NA|244aa|down_7|NZ_CP009616.1_3800797_3801529_-	PRK07854, PRK07854, enoyl-CoA hydratase; Provisional	NA|363aa|down_8|NZ_CP009616.1_3801553_3802642_+	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|194aa|down_9|NZ_CP009616.1_3802621_3803203_-	NA
GCF_000770215.1_ASM77021v1	NZ_CP009616	Mycobacterium abscessus strain 4529, complete genome	3	4518225-4518327	3	CRISPRCasFinder	no		csa3,cas3,WYL,cas4,DEDDh,DinG	Orphan	GCGCTGACCAACCCCGGCCTGACCA	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA|662aa|up_4|NZ_CP009616.1_4510945_4512931_-,NA	NA|638aa|up_9|NZ_CP009616.1_4504001_4505915_-	PRK07769, PRK07769, long-chain-fatty-acid--CoA ligase; Validated	NA|337aa|up_8|NZ_CP009616.1_4506218_4507229_-	pfam01083, Cutinase, Cutinase	NA|326aa|up_7|NZ_CP009616.1_4507468_4508446_-	COG0627, COG0627, Predicted esterase [General function prediction only]	NA|334aa|up_6|NZ_CP009616.1_4508703_4509705_-	COG0627, COG0627, Predicted esterase [General function prediction only]	NA|325aa|up_5|NZ_CP009616.1_4509782_4510757_-	COG0627, COG0627, Predicted esterase [General function prediction only]	NA|662aa|up_4|NZ_CP009616.1_4510945_4512931_-	NA	NA|305aa|up_3|NZ_CP009616.1_4512944_4513859_-	PRK12324, PRK12324, decaprenyl-phosphate phosphoribosyltransferase	NA|188aa|up_2|NZ_CP009616.1_4513855_4514419_-	cd03395, PAP2_like_4, PAP2_like_4 proteins	NA|654aa|up_1|NZ_CP009616.1_4514415_4516377_-	pfam17994, Glft2_N, Galactofuranosyltransferase 2 N-terminal	NA|413aa|up_0|NZ_CP009616.1_4516360_4517599_-	COG0562, Glf, UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane]	NA|273aa|down_0|NZ_CP009616.1_4520663_4521482_-	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|255aa|down_1|NZ_CP009616.1_4521478_4522243_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|266aa|down_2|NZ_CP009616.1_4522243_4523041_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|258aa|down_3|NZ_CP009616.1_4523088_4523862_-	PRK07231, FabG-like, SDR family oxidoreductase	NA|241aa|down_4|NZ_CP009616.1_4523906_4524629_+	cd05150, APH, Aminoglycoside 3'-phosphotransferase	NA|188aa|down_5|NZ_CP009616.1_4524674_4525238_+	pfam05257, CHAP, CHAP domain	NA|297aa|down_6|NZ_CP009616.1_4525238_4526129_-	cd08442, PBP2_YofA_SoxR_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators, YofA and SoxR, contains the type 2 periplasmic binding fold	NA|137aa|down_7|NZ_CP009616.1_4526141_4526552_-	pfam14552, Tautomerase_2, Tautomerase enzyme	NA|322aa|down_8|NZ_CP009616.1_4526555_4527521_-	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites	NA|238aa|down_9|NZ_CP009616.1_4527651_4528365_+	COG3910, COG3910, Predicted ATPase [General function prediction only]
GCF_000770215.1_ASM77021v1	NZ_CP009616	Mycobacterium abscessus strain 4529, complete genome	4	4648602-4648703	4	CRISPRCasFinder	no		csa3,cas3,WYL,cas4,DEDDh,DinG	Orphan	GGCGGATACGGTGCTCCGCCTCAG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA|74aa|up_3|NZ_CP009616.1_4644264_4644486_-,NA|74aa|up_2|NZ_CP009616.1_4644660_4644882_+,NA	NA|146aa|up_9|NZ_CP009616.1_4639679_4640117_-	pfam03994, DUF350, Domain of Unknown Function (DUF350)	NA|389aa|up_8|NZ_CP009616.1_4640155_4641322_-	pfam03738, GSP_synth, Glutathionylspermidine synthase preATP-grasp	NA|205aa|up_7|NZ_CP009616.1_4641321_4641936_-	pfam06693, DUF1190, Protein of unknown function (DUF1190)	NA|147aa|up_6|NZ_CP009616.1_4642258_4642699_-	pfam13630, SdpI, SdpI/YfhL protein family	NA|315aa|up_5|NZ_CP009616.1_4642698_4643643_-	TIGR04033, conserved_hypothetical_protein, antimicrobial peptide system protein, SdpB family	NA|199aa|up_4|NZ_CP009616.1_4643681_4644278_-	pfam17418, SdpA, Sporulation delaying protein SdpA	NA|74aa|up_3|NZ_CP009616.1_4644264_4644486_-	NA	NA|74aa|up_2|NZ_CP009616.1_4644660_4644882_+	NA	NA|143aa|up_1|NZ_CP009616.1_4645043_4645472_-	pfam13630, SdpI, SdpI/YfhL protein family	NA|211aa|up_0|NZ_CP009616.1_4646037_4646670_-	pfam09770, PAT1, Topoisomerase II-associated protein PAT1	NA|155aa|down_0|NZ_CP009616.1_4649444_4649909_+	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms]	NA|502aa|down_1|NZ_CP009616.1_4649905_4651411_+	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|486aa|down_2|NZ_CP009616.1_4651407_4652865_+	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning]	NA|505aa|down_3|NZ_CP009616.1_4652861_4654376_+	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|629aa|down_4|NZ_CP009616.1_4655633_4657520_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|225aa|down_5|NZ_CP009616.1_4657526_4658201_-	PRK07765, PRK07765, aminodeoxychorismate/anthranilate synthase component II	NA|239aa|down_6|NZ_CP009616.1_4658258_4658975_-	pfam05949, DUF881, Bacterial protein of unknown function (DUF881)	NA|88aa|down_7|NZ_CP009616.1_4659174_4659438_+	PRK00159, PRK00159, putative septation inhibitor protein; Reviewed	NA|142aa|down_8|NZ_CP009616.1_4659592_4660018_+	pfam10756, bPH_6, Bacterial PH domain	NA|300aa|down_9|NZ_CP009616.1_4660076_4660976_+	TIGR00027, Hypothetical_protein_Rv0893c/MT0917/Mb0917c
