The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP006777	Clostridium beijerinckii ATCC 35702 strain SA-1 chromosome, complete genome	5999050	461760	514831	5999050	coat,tRNA,protease	Clostridium_phage(16.67%)	51	NA	NA
WP_011967726.1|461760_462780_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	42.2	4.6e-67
WP_011967727.1|462789_463791_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_011967728.1|464056_465286_+|protease	trypsin-like serine protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	26.3	5.8e-16
WP_011967729.1|465485_465794_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_011967730.1|465806_466961_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011967731.1|467118_468237_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_011967732.1|468366_469383_+|coat	CotS family spore coat protein	coat	NA	NA	NA	NA
WP_139355879.1|469327_470191_+|coat	spore coat protein	coat	NA	NA	NA	NA
WP_011967734.1|470246_471302_+|coat	CotS family spore coat protein	coat	NA	NA	NA	NA
WP_011967735.1|471625_472747_-	glycosyltransferase family 4 protein	NA	A0A1X9SJR9	Sulfolobus_islandicus_rod-shaped_virus	27.9	1.4e-05
WP_011967736.1|472855_473854_+|coat	CotS family spore coat protein	coat	NA	NA	NA	NA
WP_011967737.1|474016_474877_+	sporulation peptidase YabG	NA	NA	NA	NA	NA
WP_011967738.1|475115_475655_+	glutathione peroxidase	NA	NA	NA	NA	NA
WP_011967739.1|476270_476513_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011967740.1|476976_478539_+	DUF3794 domain-containing protein	NA	S6BFI4	Thermus_phage	59.5	2.6e-05
WP_011967741.1|478868_479714_+	cyanophycinase	NA	NA	NA	NA	NA
WP_011967742.1|479685_482328_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_011967743.1|482476_483319_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
WP_011967744.1|483382_484120_+	stage II sporulation protein R	NA	NA	NA	NA	NA
WP_011967745.1|484251_484668_+	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_011967746.1|484773_485082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011967747.1|485246_486857_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	51.2	4.0e-150
WP_011967748.1|487167_488610_+	transcription termination factor Rho	NA	NA	NA	NA	NA
WP_011967749.1|488650_489757_-	galactosyldiacylglycerol synthase	NA	NA	NA	NA	NA
WP_011967750.1|489970_490180_-	50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_011967751.1|490369_490954_+	thymidine kinase	NA	A0A249XXF6	Clostridium_phage	55.3	5.1e-55
WP_011967752.1|490979_492740_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	A0A0K2CP67	Brevibacillus_phage	27.6	1.6e-06
WP_011967753.1|492875_493958_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_011967754.1|494023_494611_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017209891.1|494666_495716_+	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	35.4	3.3e-44
WP_038457100.1|495766_496216_+	ribose 5-phosphate isomerase B	NA	NA	NA	NA	NA
WP_011967757.1|496365_496995_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_011967758.1|497076_497571_+	cytidine deaminase	NA	A0A2H5BMD7	Streptomyces_phage	39.4	3.0e-16
WP_023974848.1|497850_498999_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	27.0	2.0e-26
WP_011967760.1|499120_500302_+	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA	NA
WP_038457103.1|501021_501387_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011967761.1|501379_502069_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_011967762.1|502122_502338_+	ATP synthase F0 subunit C	NA	NA	NA	NA	NA
WP_011967763.1|502390_502870_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_011967764.1|502872_503412_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_011967765.1|503422_504937_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_011967766.1|504978_505830_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_011967767.1|505844_507236_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_011967768.1|507251_507659_+	ATP synthase F1 subunit epsilon	NA	NA	NA	NA	NA
WP_011967769.1|507873_508524_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011967770.1|508685_509948_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_011967771.1|510515_511574_+	stage II sporulation protein D	NA	Q2XU88	Pseudomonas_phage	35.1	3.0e-37
WP_011967772.1|511998_512751_+	M23 family metallopeptidase	NA	NA	NA	NA	NA
WP_011967773.1|512858_513113_+	sporulation transcriptional regulator SpoIIID	NA	M9Q261	Clostridium_phage	56.4	5.7e-19
WP_011967774.1|513192_514227_+	rod shape-determining protein	NA	NA	NA	NA	NA
WP_011967775.1|514294_514831_-|protease	spore protease YyaC	protease	NA	NA	NA	NA
>prophage 2
NZ_CP006777	Clostridium beijerinckii ATCC 35702 strain SA-1 chromosome, complete genome	5999050	1031676	1097835	5999050	terminase,coat,head,integrase,protease,capsid,portal	Clostridium_phage(56.67%)	65	1022932:1022950	1107493:1107511
1022932:1022950	attL	AGCGCTTTAAATGCAATAG	NA	NA	NA	NA
WP_011968193.1|1031676_1032744_-|coat	CotS family spore coat protein	coat	NA	NA	NA	NA
WP_011968194.1|1033073_1034099_+	deoxyguanosinetriphosphate triphosphohydrolase	NA	NA	NA	NA	NA
WP_011968195.1|1034375_1036166_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	34.3	5.8e-57
WP_011968196.1|1036171_1037302_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	37.6	7.1e-37
WP_011968197.1|1037532_1038225_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_011968198.1|1038236_1039028_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_011968199.1|1039184_1039490_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968200.1|1040264_1042115_+	S8 family peptidase	NA	NA	NA	NA	NA
WP_011968201.1|1042111_1043830_+	S8 family peptidase	NA	NA	NA	NA	NA
WP_011968202.1|1043971_1044724_-	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA	NA
WP_011968203.1|1045161_1045929_+	transglutaminase domain-containing protein	NA	NA	NA	NA	NA
WP_011968204.1|1046199_1047309_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	Q6GZ03	Mycoplasma_phage	37.6	4.7e-25
WP_011968205.1|1047339_1048284_+	PucR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011968206.1|1048694_1049711_+	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	28.0	4.3e-25
WP_038457188.1|1049804_1051292_+	4-alpha-glucanotransferase	NA	NA	NA	NA	NA
WP_011968208.1|1051294_1053655_+	glycogen/starch/alpha-glucan phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	50.6	2.6e-17
WP_011968209.1|1053973_1054933_+	D-2-hydroxyacid dehydrogenase	NA	M1NSB9	Streptococcus_phage	30.0	3.4e-24
WP_011968210.1|1054999_1055884_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968211.1|1056194_1058363_+	type IA DNA topoisomerase	NA	A0A1V0SB35	Catovirus	22.7	3.2e-17
WP_011968212.1|1058426_1059317_-	SDR family oxidoreductase	NA	A0A2N9QUX2	Trichoplusia_ni_ascovirus	41.6	1.2e-55
WP_011968213.1|1059609_1060476_+	DUF4261 domain-containing protein	NA	NA	NA	NA	NA
WP_011968214.1|1060902_1062135_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	34.4	7.5e-40
WP_011968215.1|1062608_1064609_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	2.8e-12
WP_011968216.1|1064867_1065773_+	metallophosphoesterase family protein	NA	NA	NA	NA	NA
WP_011968217.1|1066487_1067222_+	acyltransferase	NA	NA	NA	NA	NA
WP_011968218.1|1067257_1069366_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_011968219.1|1069473_1070949_-	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_011968220.1|1071278_1071869_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011968221.1|1071843_1073457_-	recombinase family protein	NA	A0A1L2BY67	Clostridium_phage	90.9	2.7e-279
WP_011968222.1|1073558_1074056_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A1L2BY64	Clostridium_phage	79.4	1.1e-74
WP_011968223.1|1074330_1075446_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_011968224.1|1075436_1076216_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968225.1|1076250_1076931_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_011968226.1|1076937_1077351_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139356771.1|1077277_1077601_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968227.1|1077806_1078640_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011968228.1|1078724_1080272_-	DUF4041 domain-containing protein	NA	A0A142LP25	Marinitoga_camini_virus	63.6	2.2e-81
WP_011968229.1|1080354_1080696_-	helix-turn-helix transcriptional regulator	NA	A0A1L2BY72	Clostridium_phage	60.2	1.9e-30
WP_011968230.1|1080854_1081055_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011968231.1|1081107_1081539_+	helix-turn-helix transcriptional regulator	NA	A0A1L2BY71	Clostridium_phage	89.5	5.6e-67
WP_011968233.1|1081795_1082095_+	hypothetical protein	NA	A0A1L2BY79	Clostridium_phage	79.4	5.9e-23
WP_011968234.1|1082184_1082367_+	hypothetical protein	NA	A0A1L2BY78	Clostridium_phage	86.4	3.3e-21
WP_011968235.1|1082414_1083248_+	helix-turn-helix domain-containing protein	NA	A0A1L2BY83	Clostridium_phage	55.9	7.5e-68
WP_011968236.1|1083240_1084020_+	hypothetical protein	NA	A0A1L2BY85	Clostridium_phage	57.3	1.8e-71
WP_011968237.1|1084293_1084617_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011968239.1|1085033_1085351_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011968240.1|1085394_1085706_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011968241.1|1086083_1086383_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968242.1|1086741_1087134_+	hypothetical protein	NA	A0A1L2BY86	Clostridium_phage	89.2	1.2e-55
WP_038457195.1|1087371_1087554_+	hypothetical protein	NA	A0A1L2BY88	Clostridium_phage	65.6	5.0e-17
WP_011968243.1|1087569_1088175_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1L2BY87	Clostridium_phage	92.5	5.8e-102
WP_011968244.1|1088381_1088561_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968245.1|1088635_1089316_+	DUF4145 domain-containing protein	NA	A0A1L2JZ52	Aeribacillus_phage	35.8	7.6e-34
WP_011968246.1|1089441_1089747_+	hypothetical protein	NA	R9TNN2	Paenibacillus_phage	59.4	2.0e-26
WP_011968247.1|1089739_1089922_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038457197.1|1090021_1090390_+	hypothetical protein	NA	A0A1L2BY96	Clostridium_phage	82.8	9.1e-50
WP_011968249.1|1090389_1092054_+|terminase	terminase large subunit	terminase	A0A1L2BY93	Clostridium_phage	90.1	8.0e-311
WP_011968250.1|1092071_1093295_+|portal	phage portal protein	portal	A0A0A8WJ25	Clostridium_phage	59.9	1.6e-130
WP_011968251.1|1093245_1093839_+|head,protease	HK97 family phage prohead protease	head,protease	Q8SBP9	Clostridium_phage	52.9	1.7e-50
WP_011968252.1|1093858_1095061_+|capsid	phage major capsid protein	capsid	NA	NA	NA	NA
WP_011968253.1|1095160_1095445_+	DNA-packaging protein	NA	A0A1L2BY95	Clostridium_phage	85.6	4.1e-34
WP_011968254.1|1095441_1095780_+|head	phage head closure protein	head	NA	NA	NA	NA
WP_011968255.1|1095784_1096240_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968256.1|1096241_1096733_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968257.1|1096743_1097835_+	hypothetical protein	NA	A0A0A8WJR2	Clostridium_phage	34.9	2.7e-49
1107493:1107511	attR	AGCGCTTTAAATGCAATAG	NA	NA	NA	NA
>prophage 3
NZ_CP006777	Clostridium beijerinckii ATCC 35702 strain SA-1 chromosome, complete genome	5999050	1103552	1112931	5999050	plate	Clostridium_phage(75.0%)	11	NA	NA
WP_011968266.1|1103552_1104620_+|plate	baseplate J/gp47 family protein	plate	A0A0A7RUN3	Clostridium_phage	45.5	5.3e-74
WP_011968267.1|1104621_1106445_+	hypothetical protein	NA	A0A0A7S1G0	Clostridium_phage	36.4	3.6e-54
WP_011968268.1|1106446_1107052_+	YmfQ family protein	NA	A0A0A7RTU9	Clostridium_phage	56.2	3.0e-58
WP_011968270.1|1108572_1108845_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968271.1|1108837_1109053_+	hypothetical protein	NA	S6B9W8	Thermus_phage	57.1	5.2e-05
WP_011968272.1|1109230_1109467_+	membrane protein	NA	A0A0A7S0T7	Clostridium_phage	53.9	3.8e-17
WP_011968273.1|1109482_1109878_+	hypothetical protein	NA	M9Q2G0	Clostridium_phage	53.3	3.2e-24
WP_011968274.1|1109948_1110737_+	glycoside hydrolase	NA	Q0SPG7	Clostridium_phage	44.1	2.5e-36
WP_049767631.1|1111202_1111625_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011968276.1|1111652_1112129_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011968277.1|1112163_1112931_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.3	3.2e-33
>prophage 4
NZ_CP006777	Clostridium beijerinckii ATCC 35702 strain SA-1 chromosome, complete genome	5999050	1260530	1270721	5999050		Cyanophage(28.57%)	7	NA	NA
WP_011968396.1|1260530_1264274_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	31.3	7.4e-30
WP_011968397.1|1264671_1265151_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.4	3.5e-25
WP_011968398.1|1265150_1265858_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4SM18	Cyanophage	43.8	2.4e-46
WP_011968399.1|1266113_1267529_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.1	1.3e-56
WP_011968400.1|1267598_1268600_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SQF5	Cyanophage	44.5	2.2e-66
WP_011968401.1|1268587_1269199_+	phosphoribosylglycinamide formyltransferase	NA	R9S626	Prochlorococcus_phage	36.2	1.7e-21
WP_011968402.1|1269212_1270721_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	44.9	5.2e-35
>prophage 5
NZ_CP006777	Clostridium beijerinckii ATCC 35702 strain SA-1 chromosome, complete genome	5999050	1564516	1616656	5999050	portal,protease,integrase,tail	Bacillus_virus(22.22%)	52	1575751:1575768	1618539:1618556
WP_011968662.1|1564516_1565806_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.9	1.9e-142
WP_011968663.1|1566052_1567729_+|protease	ATP-dependent protease LonB	protease	M1PNB1	Moumouvirus	35.4	6.5e-18
WP_011968664.1|1568036_1570367_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	41.6	2.6e-166
WP_011968665.1|1570356_1570953_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_011968666.1|1571174_1571660_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968667.1|1571691_1571946_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968668.1|1572060_1572585_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968669.1|1572874_1573798_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011968670.1|1573935_1574343_-	transcriptional repressor	NA	NA	NA	NA	NA
WP_011968671.1|1574756_1575083_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038458264.1|1575237_1575462_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968672.1|1575604_1577089_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	50.3	1.1e-130
1575751:1575768	attL	AAAAATCTTTTATTTCTA	NA	NA	NA	NA
WP_011968673.1|1577388_1579404_+	ATP-dependent helicase	NA	Q331U3	Clostridium_botulinum_C_phage	31.5	3.5e-50
WP_038457287.1|1579488_1580457_+|integrase	tyrosine-type recombinase/integrase	integrase	A7XX23	Thermus_virus	24.7	1.3e-10
WP_158380888.1|1580559_1581294_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_038457292.1|1581534_1581714_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968676.1|1581767_1583213_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139355891.1|1583459_1583636_+	YegP family protein	NA	NA	NA	NA	NA
WP_011968678.1|1583733_1584459_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968679.1|1584490_1584790_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077836901.1|1585271_1585685_+	SHOCT domain-containing protein	NA	NA	NA	NA	NA
WP_011968681.1|1585988_1586189_-	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011968682.1|1586341_1586995_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038457294.1|1587019_1587217_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158380889.1|1587306_1587468_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968683.1|1587492_1587846_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968684.1|1587934_1588891_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968685.1|1589371_1589785_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038457297.1|1589893_1590091_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968686.1|1590093_1591941_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968687.1|1592450_1595918_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038457299.1|1596121_1596301_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011968688.1|1596630_1597266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968689.1|1597839_1598394_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968690.1|1598404_1598710_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968691.1|1598780_1599620_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139355892.1|1599758_1600010_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011968693.1|1600021_1600438_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968694.1|1600430_1601996_+	hypothetical protein	NA	E5E4F6	Acinetobacter_phage	23.6	1.8e-25
WP_011968695.1|1602028_1602256_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968696.1|1602369_1602942_+	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_011968697.1|1603055_1603211_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968698.1|1603232_1603496_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968699.1|1603566_1604835_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968700.1|1604860_1605517_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968701.1|1605520_1606102_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968702.1|1606179_1611849_+|tail	phage tail tape measure protein	tail	A0A1W6JKB3	Lactococcus_phage	25.5	4.4e-26
WP_011968703.1|1611915_1612212_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968704.1|1612311_1613700_+|portal	phage portal protein	portal	NA	NA	NA	NA
WP_011968705.1|1614524_1615352_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968706.1|1615383_1615917_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968707.1|1616068_1616656_+|integrase	tyrosine-type recombinase/integrase	integrase	A3F636	Streptococcus_phage	25.1	1.4e-07
1618539:1618556	attR	AAAAATCTTTTATTTCTA	NA	NA	NA	NA
>prophage 6
NZ_CP006777	Clostridium beijerinckii ATCC 35702 strain SA-1 chromosome, complete genome	5999050	1901496	1945448	5999050	terminase,plate,tail,portal	Clostridium_phage(50.0%)	53	NA	NA
WP_011968941.1|1901496_1901868_-	helix-turn-helix transcriptional regulator	NA	A0A0K2CZS1	Paenibacillus_phage	35.8	2.1e-09
WP_139355887.1|1902013_1902232_+	DUF739 family protein	NA	NA	NA	NA	NA
WP_011968943.1|1902384_1902894_+	helix-turn-helix domain-containing protein	NA	A0A2K9V3J3	Faecalibacterium_phage	51.4	1.7e-30
WP_158380891.1|1902893_1903052_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968944.1|1903066_1903408_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968945.1|1903388_1905380_+	hypothetical protein	NA	A0A1L2K2K3	Aeribacillus_phage	33.7	3.9e-86
WP_011968946.1|1905433_1905850_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968947.1|1905849_1906770_+	recombinase RecT	NA	A0A1L2JY28	Aeribacillus_phage	43.6	2.3e-57
WP_011968948.1|1906769_1907477_+	MBL fold metallo-hydrolase	NA	A8ATK9	Listeria_phage	46.6	3.1e-54
WP_011968949.1|1907504_1908365_+	DUF4373 domain-containing protein	NA	A0A0P0HRQ2	Lactobacillus_phage	32.3	1.9e-21
WP_011968950.1|1908357_1909125_+	hypothetical protein	NA	A0A1L2BY85	Clostridium_phage	52.8	2.1e-64
WP_139355885.1|1909145_1909283_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_011968951.1|1909282_1909495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968952.1|1909510_1909939_+	DUF1064 domain-containing protein	NA	A0A0A7RTV9	Clostridium_phage	50.7	3.9e-36
WP_011968953.1|1909942_1910587_+	hypothetical protein	NA	A0A0A7RW43	Clostridium_phage	38.0	1.3e-30
WP_011968955.1|1910945_1911467_+	hypothetical protein	NA	A0A0A7RVS1	Clostridium_phage	41.4	4.3e-21
WP_011968956.1|1911546_1912731_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968957.1|1912905_1913598_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038457357.1|1913677_1913863_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968958.1|1913866_1915099_+	ParB N-terminal domain-containing protein	NA	Q708N6	Streptococcus_phage	47.4	3.2e-99
WP_011968959.1|1915179_1915491_+	hypothetical protein	NA	A0A2K5B282	Erysipelothrix_phage	52.9	1.4e-22
WP_011968960.1|1915551_1915935_+	hypothetical protein	NA	A0A2I7RSP5	Vibrio_phage	42.6	1.4e-16
WP_011968961.1|1915957_1916740_+|terminase	terminase	terminase	A0A0A8WJN3	Clostridium_phage	51.0	1.3e-58
WP_011968962.1|1916732_1918145_+	DEAD/DEAH box helicase family protein	NA	B6SBS6	Clostridium_virus	78.5	1.1e-220
WP_011968963.1|1918135_1919635_+|portal	phage portal protein	portal	A0A0A8WI73	Clostridium_phage	74.5	3.2e-218
WP_011968964.1|1919627_1920638_+	hypothetical protein	NA	A0A1J1GF13	Clostridium_phage	54.2	1.6e-104
WP_011968965.1|1920763_1922158_+	hypothetical protein	NA	A0A0A8WFF1	Clostridium_phage	59.1	8.3e-144
WP_011968966.1|1922176_1922554_+	DUF2190 family protein	NA	A0A0A8WJN5	Clostridium_phage	60.3	1.2e-33
WP_011968967.1|1922579_1923617_+	hypothetical protein	NA	A0A0A8WEW9	Clostridium_phage	54.8	2.9e-109
WP_011968968.1|1923644_1923977_+	hypothetical protein	NA	A0A0A8WI74	Clostridium_phage	61.6	6.3e-34
WP_038457360.1|1923973_1924351_+	hypothetical protein	NA	A0A0A8WIZ3	Clostridium_phage	46.0	8.8e-24
WP_011968970.1|1924364_1924769_+	hypothetical protein	NA	A0A2H4J736	uncultured_Caudovirales_phage	64.9	1.3e-46
WP_011968971.1|1924776_1925607_+	hypothetical protein	NA	A0A2H4J4Q0	uncultured_Caudovirales_phage	63.7	4.1e-98
WP_038458297.1|1925747_1925936_+	hypothetical protein	NA	A0A0A8WEX5	Clostridium_phage	73.9	1.4e-11
WP_011968973.1|1925935_1927378_+|portal	phage portal protein	portal	A0A2H4J1N7	uncultured_Caudovirales_phage	57.7	2.2e-152
WP_011968974.1|1927397_1927814_+|tail	phage tail tube protein	tail	A0A2H4J032	uncultured_Caudovirales_phage	54.5	1.4e-38
WP_011968975.1|1927885_1928317_+	hypothetical protein	NA	A0A2H4J883	uncultured_Caudovirales_phage	52.1	4.2e-30
WP_038458300.1|1928498_1932215_+|tail	phage tail tape measure protein	tail	A0A2H4J055	uncultured_Caudovirales_phage	38.3	4.5e-120
WP_158380892.1|1932436_1932613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968978.1|1933550_1934237_+	SH3 domain-containing protein	NA	A0A2H4J045	uncultured_Caudovirales_phage	47.8	3.6e-52
WP_011968979.1|1934241_1935258_+	hypothetical protein	NA	A0A2H4J063	uncultured_Caudovirales_phage	49.4	1.3e-82
WP_038458305.1|1935295_1935598_+	hypothetical protein	NA	A0A2H4J746	uncultured_Caudovirales_phage	50.0	1.2e-20
WP_011968981.1|1935590_1936031_+	DUF2634 domain-containing protein	NA	A0A2H4J4Q8	uncultured_Caudovirales_phage	42.1	3.0e-23
WP_011968982.1|1936035_1937139_+|plate	baseplate J/gp47 family protein	plate	A0A0A7RUN3	Clostridium_phage	38.4	2.2e-54
WP_011968983.1|1937139_1938999_+	hypothetical protein	NA	A0A0A7S1G0	Clostridium_phage	35.3	5.8e-52
WP_011968984.1|1939000_1939615_+	YmfQ family protein	NA	A0A0A7RTU9	Clostridium_phage	51.7	9.2e-55
WP_011968986.1|1940801_1941074_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011968987.1|1941066_1941282_+	hypothetical protein	NA	S6B9W8	Thermus_phage	57.1	5.2e-05
WP_011968988.1|1941541_1942714_+	DUF11 domain-containing protein	NA	A0A1L2BYA9	Clostridium_phage	45.8	4.2e-56
WP_011968989.1|1942755_1943826_+	Ig domain-containing protein	NA	A0A1L2BYA9	Clostridium_phage	33.7	9.5e-15
WP_011968990.1|1943906_1944143_+	membrane protein	NA	A0A0A7S0T7	Clostridium_phage	53.9	1.1e-13
WP_011968991.1|1944158_1944599_+	hypothetical protein	NA	M9Q2G0	Clostridium_phage	61.0	3.4e-35
WP_011968992.1|1944662_1945448_+	glycoside hydrolase	NA	Q0SPG7	Clostridium_phage	44.4	3.2e-36
>prophage 7
NZ_CP006777	Clostridium beijerinckii ATCC 35702 strain SA-1 chromosome, complete genome	5999050	2580442	2586966	5999050	protease	Escherichia_phage(16.67%)	7	NA	NA
WP_012058438.1|2580442_2581267_-	TerC/Alx family metal homeostasis membrane protein	NA	A0A291LBC5	Escherichia_phage	36.9	3.3e-31
WP_012058439.1|2581754_2582609_+|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
WP_012058440.1|2583179_2583539_-	helix-turn-helix transcriptional regulator	NA	B6SBW8	Clostridium_virus	40.4	1.0e-13
WP_012058441.1|2583857_2584055_+	DUF739 family protein	NA	A0A0A7RTP5	Clostridium_phage	53.3	1.2e-08
WP_012058442.1|2584542_2585814_+	phage replisome organizer	NA	A8ASN4	Listeria_phage	51.7	5.2e-28
WP_012058443.1|2585863_2586490_+	ATP-binding protein	NA	A0A0K2CPA5	Brevibacillus_phage	39.5	1.6e-30
WP_012058444.1|2586723_2586966_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	A0A2I7SC16	Paenibacillus_phage	48.6	2.7e-10
>prophage 8
NZ_CP006777	Clostridium beijerinckii ATCC 35702 strain SA-1 chromosome, complete genome	5999050	2629158	2635879	5999050		Clostridium_phage(28.57%)	11	NA	NA
WP_012058485.1|2629158_2629518_-	helix-turn-helix transcriptional regulator	NA	B6SBW8	Clostridium_virus	40.4	2.3e-13
WP_012058486.1|2629976_2630174_+	helix-turn-helix transcriptional regulator	NA	A0A0A7RTP5	Clostridium_phage	51.7	2.7e-08
WP_012058487.1|2630292_2630553_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012058488.1|2630780_2632130_+	phage replisome organizer	NA	Q7Y4K5	Streptococcus_phage	51.8	8.8e-26
WP_012058489.1|2632179_2632806_+	ATP-binding protein	NA	Q0H276	Geobacillus_phage	41.9	1.4e-29
WP_009168788.1|2632920_2633163_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	A0A2I7SC16	Paenibacillus_phage	52.7	5.8e-13
WP_012058490.1|2633164_2633557_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012058491.1|2633635_2634391_+	phage antirepressor Ant	NA	A0A2R2ZGJ4	Clostridioides_phage	39.4	7.9e-40
WP_009168791.1|2634469_2634688_-	DUF2922 domain-containing protein	NA	NA	NA	NA	NA
WP_012058448.1|2634803_2635028_-	DUF1659 domain-containing protein	NA	NA	NA	NA	NA
WP_012058492.1|2635162_2635879_+	hypothetical protein	NA	A0A1L2BY85	Clostridium_phage	54.1	2.2e-60
>prophage 9
NZ_CP006777	Clostridium beijerinckii ATCC 35702 strain SA-1 chromosome, complete genome	5999050	3729937	3740965	5999050		Plutella_xylostella_granulovirus(16.67%)	7	NA	NA
WP_012059378.1|3729937_3731152_-	glycosyl transferase	NA	A0A142DWW1	Plutella_xylostella_granulovirus	19.8	2.2e-07
WP_012059379.1|3731545_3732298_-	phage antirepressor Ant	NA	A0A0C5AEJ9	Bacteriophage	40.2	5.8e-35
WP_012059380.1|3732323_3732566_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	A0A2I7SC16	Paenibacillus_phage	50.0	4.5e-13
WP_012059381.1|3733264_3733978_-	ATP-binding protein	NA	Q0H276	Geobacillus_phage	40.5	3.6e-34
WP_012059382.1|3733940_3734927_-	DnaD domain protein	NA	V5UQV4	Oenococcus_phage	56.4	2.4e-36
WP_012059383.1|3735495_3735879_+	DUF4440 domain-containing protein	NA	NA	NA	NA	NA
WP_012059384.1|3736624_3740965_-	DNA polymerase III subunit alpha	NA	A0A0A7RWA3	Clostridium_phage	35.0	8.0e-28
>prophage 10
NZ_CP006777	Clostridium beijerinckii ATCC 35702 strain SA-1 chromosome, complete genome	5999050	3930438	3989488	5999050	terminase,plate,transposase,tRNA,holin,tail	Clostridium_phage(72.22%)	60	NA	NA
WP_012059556.1|3930438_3930933_-|tRNA	prolyl-tRNA synthetase associated domain-containing protein	tRNA	NA	NA	NA	NA
WP_012059557.1|3931260_3931923_-	cell wall-binding repeat-containing protein	NA	NA	NA	NA	NA
WP_012059558.1|3932330_3932717_-	hypothetical protein	NA	I2E8W8	Clostridium_phage	43.7	2.7e-20
WP_012059559.1|3932732_3932966_-	membrane protein	NA	A0A0A7S0T7	Clostridium_phage	51.9	1.2e-15
WP_012059560.1|3933218_3934646_-	DUF11 domain-containing protein	NA	A0A1L2BYA9	Clostridium_phage	52.2	1.8e-48
WP_012059561.1|3934863_3935037_-	XkdX family protein	NA	NA	NA	NA	NA
WP_012059562.1|3935038_3935323_-	hypothetical protein	NA	B6SBV4	Clostridium_virus	30.3	8.1e-06
WP_012059564.1|3937170_3937953_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012059565.1|3938123_3938777_-|tail	phage tail protein	tail	A0A0A7RTP0	Clostridium_phage	58.2	1.9e-50
WP_012059566.1|3938778_3939483_-	YmfQ family protein	NA	A0A0A7RTT8	Clostridium_phage	45.1	3.9e-41
WP_038457724.1|3939475_3940582_-|plate	baseplate J/gp47 family protein	plate	A0A0A7RUN3	Clostridium_phage	35.7	3.6e-49
WP_012059568.1|3940574_3941015_-	DUF2634 domain-containing protein	NA	A0A0A7S0E2	Clostridium_phage	44.3	1.5e-22
WP_012059569.1|3941007_3941331_-	DUF2577 domain-containing protein	NA	NA	NA	NA	NA
WP_012059570.1|3941330_3942335_-	hypothetical protein	NA	A0A0A7RTP6	Clostridium_phage	37.1	5.0e-58
WP_012059571.1|3942331_3942811_-	hypothetical protein	NA	A0A090DBR9	Clostridium_phage	32.0	3.1e-18
WP_012059572.1|3942824_3945245_-	hypothetical protein	NA	A0A2K9V3N5	Faecalibacterium_phage	34.3	1.7e-06
WP_012059573.1|3945420_3945825_-	hypothetical protein	NA	A0A0A7RTP2	Clostridium_phage	49.2	2.2e-28
WP_012059574.1|3946228_3946660_-|tail	phage tail tube protein	tail	A0A0A7RVT1	Clostridium_phage	58.1	3.8e-39
WP_012059575.1|3946672_3947794_-|terminase	terminase	terminase	A0A0A7S0D2	Clostridium_phage	46.8	7.7e-84
WP_012059576.1|3947806_3948241_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012059577.1|3948732_3949398_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012059578.1|3949472_3949979_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012059579.1|3950179_3950734_-	RNA 2'-phosphotransferase	NA	A0A0A8WJJ2	Clostridium_phage	61.5	2.1e-58
WP_012059580.1|3951307_3953554_+	hybrid sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	35.5	2.3e-42
WP_049767639.1|3953569_3954058_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077836852.1|3954041_3955262_+	hybrid sensor histidine kinase/response regulator	NA	W8CYM9	Bacillus_phage	39.8	4.4e-16
WP_012059583.1|3955838_3956411_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_012059584.1|3956658_3958623_-	cell wall binding repeat-containing protein	NA	NA	NA	NA	NA
WP_038457728.1|3959641_3959833_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012059585.1|3960290_3960836_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012059587.1|3961511_3962405_-	EamA family transporter	NA	NA	NA	NA	NA
WP_038457734.1|3962691_3963594_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_012059589.1|3963741_3964308_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012059590.1|3964843_3965620_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_012059591.1|3965625_3966222_-	LysE family transporter	NA	NA	NA	NA	NA
WP_012059592.1|3966391_3966811_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_012059593.1|3967347_3968091_-	DUF1963 domain-containing protein	NA	NA	NA	NA	NA
WP_012059594.1|3968228_3968528_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012059595.1|3968665_3969229_-	nitroreductase	NA	NA	NA	NA	NA
WP_012059596.1|3969296_3969824_-	flavodoxin	NA	NA	NA	NA	NA
WP_012059597.1|3970038_3970644_-	DUF1847 domain-containing protein	NA	NA	NA	NA	NA
WP_038458483.1|3971097_3971355_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_012059599.1|3971854_3972907_-	galactose ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_012059600.1|3973243_3974125_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_012059601.1|3974257_3974875_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_012059602.1|3974964_3975174_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012059603.1|3975390_3975783_-	hemerythrin family protein	NA	NA	NA	NA	NA
WP_012059604.1|3975883_3976381_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_012059606.1|3976811_3977177_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_012059608.1|3978727_3979444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012059609.1|3979458_3980289_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	33.8	6.9e-21
WP_012059610.1|3980794_3981217_-	cytidine deaminase	NA	NA	NA	NA	NA
WP_012059611.1|3981650_3982574_-	DMT family transporter	NA	NA	NA	NA	NA
WP_012059612.1|3982566_3983406_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_077310119.1|3983659_3983761_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_012059613.1|3984056_3984446_-	glyoxalase	NA	NA	NA	NA	NA
WP_012059614.1|3984508_3985123_-	sugar O-acetyltransferase	NA	NA	NA	NA	NA
WP_012059615.1|3985203_3986451_-	MFS transporter	NA	NA	NA	NA	NA
WP_012059616.1|3986720_3987614_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011968803.1|3988030_3989488_-|transposase	ISNCY family transposase	transposase	NA	NA	NA	NA
