assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000764595.1_ASM76459v1	NZ_CP004385	Burkholderia thailandensis MSMB59 chromosome 1, complete sequence	1	414283-414406	1	CRISPRCasFinder	no		WYL,cas3,RT,PrimPol,DEDDh,csa3,DinG,PD-DExK	Orphan	TTAGCGCTTACTCCGATCCCATGCCGTGGTTG	32	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,RT,PrimPol,DEDDh,csa3,DinG,PD-DExK	NA|65aa|up_2|NZ_CP004385.1_411641_411836_-,NA	NA|514aa|up_9|NZ_CP004385.1_399082_400624_+	cd17631, FACL_FadD13-like, fatty acyl-CoA synthetase, including FadD13	NA|380aa|up_8|NZ_CP004385.1_400823_401963_-	cd06342, PBP1_ABC_LIVBP-like, type 1 periplasmic ligand-binding domain of ABC (Atpase Binding Cassette)-type active transport systems involved in the transport of all three branched chain aliphatic amino acids (leucine, isoleucine and valine)	NA|1310aa|up_7|NZ_CP004385.1_402047_405977_-	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|57aa|up_6|NZ_CP004385.1_406260_406431_+	cd05928, MACS_euk, Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM)	NA|756aa|up_5|NZ_CP004385.1_406441_408709_-	PRK05580, PRK05580, primosome assembly protein PriA; Validated	NA|365aa|up_4|NZ_CP004385.1_409149_410244_-	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|265aa|up_3|NZ_CP004385.1_410392_411187_+	cd01069, PBP2_PheC, Cyclohexadienyl dehydratase, a member of the type 2 periplasmic binding fold protein superfamily	NA|65aa|up_2|NZ_CP004385.1_411641_411836_-	NA	NA|577aa|up_1|NZ_CP004385.1_411877_413608_-	PRK08315, PRK08315, AMP-binding domain protein; Validated	NA|142aa|up_0|NZ_CP004385.1_413827_414253_-	PRK00571, atpC, F0F1 ATP synthase subunit epsilon; Validated	NA|465aa|down_0|NZ_CP004385.1_414545_415940_-	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated	NA|292aa|down_1|NZ_CP004385.1_416019_416895_-	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated	NA|514aa|down_2|NZ_CP004385.1_416966_418508_-	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated	NA|180aa|down_3|NZ_CP004385.1_418554_419094_-	PRK05758, PRK05758, F0F1 ATP synthase subunit delta; Validated	NA|157aa|down_4|NZ_CP004385.1_419096_419567_-	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated	NA|90aa|down_5|NZ_CP004385.1_419694_419964_-	PRK06876, PRK06876, F0F1 ATP synthase subunit C; Validated	NA|284aa|down_6|NZ_CP004385.1_420040_420892_-	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated	NA|177aa|down_7|NZ_CP004385.1_421004_421535_-	pfam03899, ATP-synt_I, ATP synthase I chain	NA|378aa|down_8|NZ_CP004385.1_421805_422939_-	cd01117, YbiR_permease, Putative anion permease YbiR	NA|296aa|down_9|NZ_CP004385.1_422945_423833_-	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein
GCF_000764595.1_ASM76459v1	NZ_CP004385	Burkholderia thailandensis MSMB59 chromosome 1, complete sequence	2	2079843-2079942	2	CRISPRCasFinder	no		WYL,cas3,RT,PrimPol,DEDDh,csa3,DinG,PD-DExK	Orphan	GCGAAGTGCGTGCGCGGCGGCGCGCATG	28	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,RT,PrimPol,DEDDh,csa3,DinG,PD-DExK	NA|113aa|up_2|NZ_CP004385.1_2077449_2077788_+,NA|214aa|down_2|NZ_CP004385.1_2082828_2083470_-,NA|163aa|down_5|NZ_CP004385.1_2084911_2085400_-	NA|232aa|up_9|NZ_CP004385.1_2070465_2071161_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|511aa|up_8|NZ_CP004385.1_2071274_2072807_+	cd11555, SLC-NCS1sbd_u1, uncharacterized nucleobase-cation-symport-1 (NCS1) transporter subfamily; solute-binding domain	NA|288aa|up_7|NZ_CP004385.1_2072817_2073681_+	COG4126, COG4126, Hydantoin racemase [Amino acid transport and metabolism]	NA|318aa|up_6|NZ_CP004385.1_2073826_2074780_+	TIGR03212, uraD_N-term-dom, putative urate catabolism protein	NA|175aa|up_5|NZ_CP004385.1_2074776_2075301_+	COG3195, COG3195, Uncharacterized protein conserved in bacteria [Function unknown]	NA|338aa|up_4|NZ_CP004385.1_2075540_2076554_+	PRK13257, PRK13257, allantoicase; Provisional	NA|171aa|up_3|NZ_CP004385.1_2076550_2077063_+	PRK03606, PRK03606, ureidoglycolate lyase	NA|113aa|up_2|NZ_CP004385.1_2077449_2077788_+	NA	NA|401aa|up_1|NZ_CP004385.1_2078003_2079206_-	pfam06181, Urate_ox_N, Urate oxidase N-terminal	NA|120aa|up_0|NZ_CP004385.1_2079255_2079615_-	COG2351, COG2351, Transthyretin-like protein [General function prediction only]	NA|471aa|down_0|NZ_CP004385.1_2080241_2081654_+	PRK08203, PRK08203, hydroxydechloroatrazine ethylaminohydrolase; Reviewed	NA|310aa|down_1|NZ_CP004385.1_2081843_2082773_-	cd08463, PBP2_DntR_like_4, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator similar to DntR, which is involved in the catabolism of dinitrotoluene; contains the type 2 periplasmic binding fold	NA|214aa|down_2|NZ_CP004385.1_2082828_2083470_-	NA	NA|70aa|down_3|NZ_CP004385.1_2083524_2083734_-	pfam07311, Dodecin, Dodecin	NA|296aa|down_4|NZ_CP004385.1_2083873_2084761_+	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]	NA|163aa|down_5|NZ_CP004385.1_2084911_2085400_-	NA	NA|144aa|down_6|NZ_CP004385.1_2085725_2086157_-	PRK13952, mscL, large conductance mechanosensitive channel protein MscL	NA|402aa|down_7|NZ_CP004385.1_2086340_2087546_-	sd00006, TPR, Tetratricopeptide repeat	NA|227aa|down_8|NZ_CP004385.1_2087659_2088340_-	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]	NA|853aa|down_9|NZ_CP004385.1_2088820_2091379_+	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane]
GCF_000764595.1_ASM76459v1	NZ_CP004386	Burkholderia thailandensis MSMB59 chromosome 2, complete sequence	1	612228-612319	1	CRISPRCasFinder	no	csa3	DinG,csa3,cas3	Type I-A	GCGACGCGCGCAAGGCCGAAGCG	23	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,RT,PrimPol,DEDDh,csa3,DinG,PD-DExK	NA|114aa|up_6|NZ_CP004386.1_605606_605948_+,NA|94aa|up_5|NZ_CP004386.1_605972_606254_+,NA|214aa|up_3|NZ_CP004386.1_607938_608580_+,NA|118aa|up_2|NZ_CP004386.1_608667_609021_-,NA|91aa|down_7|NZ_CP004386.1_623726_623999_+	NA|312aa|up_9|NZ_CP004386.1_600663_601599_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|677aa|up_8|NZ_CP004386.1_601938_603969_+	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter	NA|397aa|up_7|NZ_CP004386.1_604242_605433_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|114aa|up_6|NZ_CP004386.1_605606_605948_+	NA	NA|94aa|up_5|NZ_CP004386.1_605972_606254_+	NA	NA|483aa|up_4|NZ_CP004386.1_606312_607761_+	cd16013, AcpA, acid phosphatase A	NA|214aa|up_3|NZ_CP004386.1_607938_608580_+	NA	NA|118aa|up_2|NZ_CP004386.1_608667_609021_-	NA	NA|339aa|up_1|NZ_CP004386.1_609674_610691_-	PRK12390, PRK12390, 1-aminocyclopropane-1-carboxylate deaminase; Provisional	NA|170aa|up_0|NZ_CP004386.1_610883_611393_+	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|207aa|down_0|NZ_CP004386.1_613605_614226_-	cd04303, HAD_PGPase, phosphoglycolate phosphatase, similar to Synechococcus elongates phosphoglycolate phosphatase PGP/CbbZ	NA|421aa|down_1|NZ_CP004386.1_614581_615844_-	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|242aa|down_2|NZ_CP004386.1_616044_616770_+	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|436aa|down_3|NZ_CP004386.1_616819_618127_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|297aa|down_4|NZ_CP004386.1_618178_619069_+	COG3618, COG3618, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|493aa|down_5|NZ_CP004386.1_619287_620766_+	cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain	NA|544aa|down_6|NZ_CP004386.1_620762_622394_+	COG1858, MauG, Cytochrome c peroxidase [Inorganic ion transport and metabolism]	NA|91aa|down_7|NZ_CP004386.1_623726_623999_+	NA	NA|71aa|down_8|NZ_CP004386.1_624303_624516_+	pfam11278, DUF3079, Protein of unknown function (DUF3079)	NA|170aa|down_9|NZ_CP004386.1_624827_625337_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
GCF_000764595.1_ASM76459v1	NZ_CP004386	Burkholderia thailandensis MSMB59 chromosome 2, complete sequence	2	1852360-1852594	1	CRT	no		DinG,csa3,cas3	Orphan	AGGTGAGGNTTTTCGGGA	18	0	0	NA	NA	NA	4	4	Orphan	WYL,cas3,RT,PrimPol,DEDDh,csa3,DinG,PD-DExK	NA|144aa|up_8|NZ_CP004386.1_1844367_1844799_+,NA	NA|216aa|up_9|NZ_CP004386.1_1843723_1844371_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|144aa|up_8|NZ_CP004386.1_1844367_1844799_+	NA	NA|183aa|up_7|NZ_CP004386.1_1844912_1845461_+	PRK05482, PRK05482, potassium-transporting ATPase subunit A; Provisional	NA|70aa|up_6|NZ_CP004386.1_1845349_1845559_+	PRK05482, PRK05482, potassium-transporting ATPase subunit A; Provisional	NA|344aa|up_5|NZ_CP004386.1_1845683_1846715_-	PRK05396, tdh, L-threonine 3-dehydrogenase; Validated	NA|400aa|up_4|NZ_CP004386.1_1846727_1847927_-	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional	NA|203aa|up_3|NZ_CP004386.1_1848094_1848703_+	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain	NA|127aa|up_2|NZ_CP004386.1_1848782_1849163_+	pfam10616, DUF2471, Protein of unknown function (DUF2471)	NA|348aa|up_1|NZ_CP004386.1_1849328_1850372_+	pfam00589, Phage_integrase, Phage integrase family	NA|396aa|up_0|NZ_CP004386.1_1850464_1851652_-	pfam11740, KfrA_N, Plasmid replication region DNA-binding N-term	NA|485aa|down_0|NZ_CP004386.1_1854608_1856063_+	pfam01051, Rep_3, Initiator Replication protein	NA|356aa|down_1|NZ_CP004386.1_1856156_1857224_-	TIGR00180, Probable_chromosome-partitioning_protein_ParB, ParB/RepB/Spo0J family partition protein	NA|221aa|down_2|NZ_CP004386.1_1857248_1857911_-	cd02042, ParAB_family, partition proteins ParAB family	NA|119aa|down_3|NZ_CP004386.1_1858495_1858852_+	cd03034, ArsC_ArsC, Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli	NA|66aa|down_4|NZ_CP004386.1_1859146_1859344_-	pfam13490, zf-HC2, Putative zinc-finger	NA|202aa|down_5|NZ_CP004386.1_1859324_1859930_-	PRK12545, PRK12545, RNA polymerase factor sigma-70	NA|186aa|down_6|NZ_CP004386.1_1860294_1860852_+	COG0431, COG0431, Predicted flavoprotein [General function prediction only]	NA|756aa|down_7|NZ_CP004386.1_1860981_1863249_-	PRK13557, PRK13557, histidine kinase; Provisional	NA|123aa|down_8|NZ_CP004386.1_1863754_1864123_+	cd17593, REC_CheC-like, phosphoacceptor receiver (REC) domain of uncharacterized response regulators containing a CheC domain	NA|208aa|down_9|NZ_CP004386.1_1864115_1864739_+	cd17910, CheC_ClassII, chemotaxis protein CheC, Class II
