assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000764045.2_ASM76404v2	NZ_CP016829	Corynebacterium pseudotuberculosis strain MB20 chromosome, complete genome	1	22364-22577	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,csa3,DinG,cas4	Type I-E	ACGGGAACTACCTCCGCATACGCGGAGAAAAGT,GGAACTACCTCCGCATACGCGGAGAAAAG,GGAACTACCTCCGCATACGCGGAGAAAAGT	33,29,30	0	0	NA	NA	I-C,I-E,II-B:I-C,I-E,II-B:I-C,I-E,II-B	2,3,3	3	TypeI-E	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,csa3,DinG,cas4	NA|71aa|up_9|NZ_CP016829.1_8704_8917_-,NA|101aa|up_0|NZ_CP016829.1_21730_22033_-,NA	NA|71aa|up_9|NZ_CP016829.1_8704_8917_-	NA	NA|115aa|up_8|NZ_CP016829.1_11647_11992_+	pfam12089, DUF3566, Transmembrane domain of unknown function (DUF3566)	NA|260aa|up_7|NZ_CP016829.1_12430_13210_+	pfam14256, YwiC, YwiC-like protein	NA|172aa|up_6|NZ_CP016829.1_13537_14053_+	smart00112, CA, Cadherin repeats	NA|334aa|up_5|NZ_CP016829.1_14684_15686_+	cd06312, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems	NA|364aa|up_4|NZ_CP016829.1_15682_16774_+	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|258aa|up_3|NZ_CP016829.1_16775_17549_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|179aa|up_2|NZ_CP016829.1_18400_18937_+	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]	NA|257aa|up_1|NZ_CP016829.1_18998_19769_+	pfam01694, Rhomboid, Rhomboid family	NA|101aa|up_0|NZ_CP016829.1_21730_22033_-	NA	cas2|124aa|down_0|NZ_CP016829.1_22594_22966_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|318aa|down_1|NZ_CP016829.1_22966_23920_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas3|896aa|down_2|NZ_CP016829.1_23922_26610_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas6e|237aa|down_3|NZ_CP016829.1_26630_27341_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas8e|538aa|down_4|NZ_CP016829.1_27551_29165_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cse2gr11|198aa|down_5|NZ_CP016829.1_29161_29755_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|356aa|down_6|NZ_CP016829.1_29754_30822_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|231aa|down_7|NZ_CP016829.1_30833_31526_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	NA|347aa|down_8|NZ_CP016829.1_31600_32641_-	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|308aa|down_9|NZ_CP016829.1_33048_33972_+	cd08576, GDPD_like_SMaseD_PLD, Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins
GCF_000764045.2_ASM76404v2	NZ_CP016829	Corynebacterium pseudotuberculosis strain MB20 chromosome, complete genome	2	27392-27463	2	CRISPRCasFinder	no	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,csa3,DinG,cas4	Type I-E	TTCCTCGCGTCCTGCGGGGGTAG	23	0	0	NA	NA	NA	1	1	TypeI-E	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,csa3,DinG,cas4	NA|101aa|up_4|NZ_CP016829.1_21730_22033_-,NA	NA|334aa|up_9|NZ_CP016829.1_14684_15686_+	cd06312, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems	NA|364aa|up_8|NZ_CP016829.1_15682_16774_+	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|258aa|up_7|NZ_CP016829.1_16775_17549_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|179aa|up_6|NZ_CP016829.1_18400_18937_+	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]	NA|257aa|up_5|NZ_CP016829.1_18998_19769_+	pfam01694, Rhomboid, Rhomboid family	NA|101aa|up_4|NZ_CP016829.1_21730_22033_-	NA	cas2|124aa|up_3|NZ_CP016829.1_22594_22966_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|318aa|up_2|NZ_CP016829.1_22966_23920_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas3|896aa|up_1|NZ_CP016829.1_23922_26610_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas6e|237aa|up_0|NZ_CP016829.1_26630_27341_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas8e|538aa|down_0|NZ_CP016829.1_27551_29165_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cse2gr11|198aa|down_1|NZ_CP016829.1_29161_29755_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|356aa|down_2|NZ_CP016829.1_29754_30822_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|231aa|down_3|NZ_CP016829.1_30833_31526_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	NA|347aa|down_4|NZ_CP016829.1_31600_32641_-	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|308aa|down_5|NZ_CP016829.1_33048_33972_+	cd08576, GDPD_like_SMaseD_PLD, Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins	NA|289aa|down_6|NZ_CP016829.1_34024_34891_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|329aa|down_7|NZ_CP016829.1_34899_35886_-	PRK10440, PRK10440, iron-enterobactin ABC transporter permease	NA|356aa|down_8|NZ_CP016829.1_35885_36953_-	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease	NA|351aa|down_9|NZ_CP016829.1_36999_38052_+	cd01146, FhuD, Fe3+-siderophore binding domain FhuD
GCF_000764045.2_ASM76404v2	NZ_CP016829	Corynebacterium pseudotuberculosis strain MB20 chromosome, complete genome	3	685128-685217	3	CRISPRCasFinder	no	DinG	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,csa3,DinG,cas4	Type IV-A	GAACTACCTCCGCGTGCGCGGAGAAAAGG	29	0	0	NA	NA	I-C,I-E,II-B	1	1	Orphan	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,csa3,DinG,cas4	NA|75aa|up_9|NZ_CP016829.1_678381_678606_-,NA|26aa|up_6|NZ_CP016829.1_679240_679318_+,NA|280aa|up_4|NZ_CP016829.1_682202_683042_+,NA|77aa|up_3|NZ_CP016829.1_683831_684062_-,NA|64aa|up_1|NZ_CP016829.1_684428_684620_-,NA|90aa|up_0|NZ_CP016829.1_684812_685082_-,NA	NA|75aa|up_9|NZ_CP016829.1_678381_678606_-	NA	NA|79aa|up_8|NZ_CP016829.1_678755_678992_+	pfam04796, RepA_C, Plasmid encoded RepA protein	NA|53aa|up_7|NZ_CP016829.1_679067_679226_+	pfam04796, RepA_C, Plasmid encoded RepA protein	NA|26aa|up_6|NZ_CP016829.1_679240_679318_+	NA	NA|88aa|up_5|NZ_CP016829.1_681212_681476_+	cd02042, ParAB_family, partition proteins ParAB family	NA|280aa|up_4|NZ_CP016829.1_682202_683042_+	NA	NA|77aa|up_3|NZ_CP016829.1_683831_684062_-	NA	NA|80aa|up_2|NZ_CP016829.1_684119_684359_-	pfam02661, Fic, Fic/DOC family	NA|64aa|up_1|NZ_CP016829.1_684428_684620_-	NA	NA|90aa|up_0|NZ_CP016829.1_684812_685082_-	NA	NA|428aa|down_0|NZ_CP016829.1_685510_686794_+	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p	NA|166aa|down_1|NZ_CP016829.1_686790_687288_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	DinG|665aa|down_2|NZ_CP016829.1_687311_689306_-	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|453aa|down_3|NZ_CP016829.1_689358_690717_-	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated	NA|100aa|down_4|NZ_CP016829.1_690923_691223_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|179aa|down_5|NZ_CP016829.1_691317_691854_+	pfam09438, DUF2017, Domain of unknown function (DUF2017)	NA|273aa|down_6|NZ_CP016829.1_691940_692759_+	pfam01694, Rhomboid, Rhomboid family	NA|256aa|down_7|NZ_CP016829.1_693800_694568_+	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain	NA|245aa|down_8|NZ_CP016829.1_694606_695341_+	PRK00173, rph, ribonuclease PH; Reviewed	NA|208aa|down_9|NZ_CP016829.1_695337_695961_+	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed
