assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000761155.1_ASM76115v1	NZ_CP009533	Pseudomonas rhizosphaerae strain DSM 16299 chromosome, complete genome	1	384570-384682	1	CRISPRCasFinder	no		DinG,DEDDh,csa3,cas3	Orphan	CCCTGTGGGAGCGGGTTCTACCCGCGAAAACGCCAGCCCC	40	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,csa3,cas3	NA|30aa|up_5|NZ_CP009533.1_376687_376777_+,NA|93aa|down_0|NZ_CP009533.1_384895_385174_+,NA|77aa|down_5|NZ_CP009533.1_389981_390212_-,NA|103aa|down_9|NZ_CP009533.1_393499_393808_+	NA|102aa|up_9|NZ_CP009533.1_369997_370303_+	pfam18629, DUF5629, Family of unknown function (DUF5629)	NA|386aa|up_8|NZ_CP009533.1_370407_371565_+	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller	NA|1211aa|up_7|NZ_CP009533.1_371619_375252_-	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|414aa|up_6|NZ_CP009533.1_375248_376490_-	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|30aa|up_5|NZ_CP009533.1_376687_376777_+	NA	NA|565aa|up_4|NZ_CP009533.1_376783_378478_+	PRK05482, PRK05482, potassium-transporting ATPase subunit A; Provisional	NA|685aa|up_3|NZ_CP009533.1_378488_380543_+	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB	NA|187aa|up_2|NZ_CP009533.1_380559_381120_+	pfam02669, KdpC, K+-transporting ATPase, c chain	NA|879aa|up_1|NZ_CP009533.1_381148_383785_+	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]	NA|241aa|up_0|NZ_CP009533.1_383787_384510_+	PRK10529, PRK10529, DNA-binding transcriptional activator KdpE; Provisional	NA|93aa|down_0|NZ_CP009533.1_384895_385174_+	NA	NA|306aa|down_1|NZ_CP009533.1_385254_386172_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|328aa|down_2|NZ_CP009533.1_386141_387125_+	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|662aa|down_3|NZ_CP009533.1_387121_389107_+	pfam11992, DUF3488, Domain of unknown function (DUF3488)	NA|265aa|down_4|NZ_CP009533.1_389218_390013_+	pfam13622, 4HBT_3, Thioesterase-like superfamily	NA|77aa|down_5|NZ_CP009533.1_389981_390212_-	NA	NA|282aa|down_6|NZ_CP009533.1_390367_391213_-	PRK10425, PRK10425, 3'-5' ssDNA/RNA exonuclease TatD	NA|474aa|down_7|NZ_CP009533.1_391334_392756_+	COG4623, COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein [Cell envelope biogenesis, outer membrane]	NA|159aa|down_8|NZ_CP009533.1_392826_393303_+	PRK01885, greB, transcription elongation factor GreB; Reviewed	NA|103aa|down_9|NZ_CP009533.1_393499_393808_+	NA
GCF_000761155.1_ASM76115v1	NZ_CP009533	Pseudomonas rhizosphaerae strain DSM 16299 chromosome, complete genome	2	802698-802809	2	CRISPRCasFinder	no		DinG,DEDDh,csa3,cas3	Orphan	TAGCAGCGGCGCAAGCCGCGTCGGCGG	27	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,csa3,cas3	NA,NA	NA|337aa|up_9|NZ_CP009533.1_789280_790291_-	PRK10914, PRK10914, dipeptide ABC transporter permease DppB	NA|532aa|up_8|NZ_CP009533.1_790367_791963_-	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold	NA|460aa|up_7|NZ_CP009533.1_792035_793415_-	pfam03573, OprD, outer membrane porin, OprD family	NA|533aa|up_6|NZ_CP009533.1_793576_795175_-	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold	NA|534aa|up_5|NZ_CP009533.1_795382_796984_-	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold	NA|534aa|up_4|NZ_CP009533.1_797240_798842_-	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold	NA|237aa|up_3|NZ_CP009533.1_798939_799650_-	COG3471, COG3471, Predicted periplasmic/secreted protein [Function unknown]	NA|420aa|up_2|NZ_CP009533.1_799850_801110_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|187aa|up_1|NZ_CP009533.1_801106_801667_+	COG4567, COG4567, Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription]	NA|250aa|up_0|NZ_CP009533.1_801821_802571_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|304aa|down_0|NZ_CP009533.1_802964_803876_+	PRK03620, PRK03620, 5-dehydro-4-deoxyglucarate dehydratase; Provisional	NA|314aa|down_1|NZ_CP009533.1_804086_805028_+	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|451aa|down_2|NZ_CP009533.1_805073_806426_+	PRK10238, PRK10238, aromatic amino acid transporter AroP	NA|342aa|down_3|NZ_CP009533.1_806433_807459_-	TIGR00367, Uncharacterized_membrane_protein_MJ0091, K+-dependent Na+/Ca+ exchanger related-protein	NA|166aa|down_4|NZ_CP009533.1_807516_808014_-	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane]	NA|482aa|down_5|NZ_CP009533.1_808013_809459_-	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA|484aa|down_6|NZ_CP009533.1_809470_810922_-	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|96aa|down_7|NZ_CP009533.1_810939_811227_-	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|346aa|down_8|NZ_CP009533.1_811432_812470_+	PRK13927, PRK13927, rod shape-determining protein MreB; Provisional	NA|354aa|down_9|NZ_CP009533.1_812606_813668_+	PRK13922, PRK13922, rod shape-determining protein MreC; Provisional
GCF_000761155.1_ASM76115v1	NZ_CP009533	Pseudomonas rhizosphaerae strain DSM 16299 chromosome, complete genome	3	1210573-1210729	3	CRISPRCasFinder	no	cas3	DinG,DEDDh,csa3,cas3	Unclear	GGAGCGGTCATCGGCCGCGAAGGGCGCACCGCGTAGTGCCTGGCACACCGC	51	0	0	NA	NA	NA	1	1	Unclear	DinG,DEDDh,csa3,cas3	NA|94aa|up_1|NZ_CP009533.1_1208038_1208320_+,NA|131aa|down_3|NZ_CP009533.1_1214454_1214847_+	NA|108aa|up_9|NZ_CP009533.1_1197633_1197957_-	TIGR02684, conserved_hypothetical_protein, probable addiction module antidote protein	NA|102aa|up_8|NZ_CP009533.1_1197953_1198259_-	TIGR02683, Uncharacterized_protein_HI_1419, putative addiction module killer protein	NA|396aa|up_7|NZ_CP009533.1_1198560_1199748_+	PRK03545, PRK03545, putative arabinose transporter; Provisional	NA|171aa|up_6|NZ_CP009533.1_1199907_1200420_+	PRK09651, PRK09651, RNA polymerase sigma factor FecI; Provisional	NA|317aa|up_5|NZ_CP009533.1_1200413_1201364_+	PRK09774, PRK09774, fec operon regulator FecR; Reviewed	NA|811aa|up_4|NZ_CP009533.1_1201429_1203862_+	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|648aa|up_3|NZ_CP009533.1_1204002_1205946_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|143aa|up_2|NZ_CP009533.1_1207332_1207761_+	pfam14534, DUF4440, Domain of unknown function (DUF4440)	NA|94aa|up_1|NZ_CP009533.1_1208038_1208320_+	NA	NA|627aa|up_0|NZ_CP009533.1_1208403_1210284_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|91aa|down_0|NZ_CP009533.1_1211043_1211316_+	pfam11275, DUF3077, Protein of unknown function (DUF3077)	NA|422aa|down_1|NZ_CP009533.1_1211520_1212786_-	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	cas3|448aa|down_2|NZ_CP009533.1_1212970_1214314_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|131aa|down_3|NZ_CP009533.1_1214454_1214847_+	NA	NA|309aa|down_4|NZ_CP009533.1_1215023_1215950_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|513aa|down_5|NZ_CP009533.1_1216301_1217840_-	PRK12266, glpD, glycerol-3-phosphate dehydrogenase; Reviewed	NA|252aa|down_6|NZ_CP009533.1_1218152_1218908_-	PRK10906, PRK10906, DeoR/GlpR family transcriptional regulator	NA|501aa|down_7|NZ_CP009533.1_1219045_1220548_-	PRK00047, glpK, glycerol kinase GlpK	NA|280aa|down_8|NZ_CP009533.1_1220601_1221441_-	cd00333, MIP, Major intrinsic protein (MIP) superfamily	NA|157aa|down_9|NZ_CP009533.1_1221737_1222208_+	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins
GCF_000761155.1_ASM76115v1	NZ_CP009533	Pseudomonas rhizosphaerae strain DSM 16299 chromosome, complete genome	4	1977382-1977492	4	CRISPRCasFinder	no		DinG,DEDDh,csa3,cas3	Orphan	CCCCTGTAGCAGCGGCGCAAGCCGCGTCC	29	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,csa3,cas3	NA|69aa|up_8|NZ_CP009533.1_1967582_1967789_+,NA|111aa|up_7|NZ_CP009533.1_1967906_1968239_-,NA|116aa|up_6|NZ_CP009533.1_1968421_1968769_+,NA|73aa|up_5|NZ_CP009533.1_1968881_1969100_+,NA	NA|475aa|up_9|NZ_CP009533.1_1965981_1967406_-	PRK10655, potE, putrescine transporter; Provisional	NA|69aa|up_8|NZ_CP009533.1_1967582_1967789_+	NA	NA|111aa|up_7|NZ_CP009533.1_1967906_1968239_-	NA	NA|116aa|up_6|NZ_CP009533.1_1968421_1968769_+	NA	NA|73aa|up_5|NZ_CP009533.1_1968881_1969100_+	NA	NA|944aa|up_4|NZ_CP009533.1_1969102_1971934_-	cd01344, PL2_Passenger_AT, Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 2, of autotransporter proteins of the type V secretion system of Gram-negative bacteria	NA|293aa|up_3|NZ_CP009533.1_1972161_1973040_-	cd00789, KU_like, Ku-core domain, Ku-like subfamily; composed of prokaryotic homologs of the eukaryotic DNA binding protein Ku	NA|86aa|up_2|NZ_CP009533.1_1973292_1973550_+	pfam07865, DUF1652, Protein of unknown function (DUF1652)	NA|92aa|up_1|NZ_CP009533.1_1973670_1973946_-	PRK15441, PRK15441, peptidyl-prolyl cis-trans isomerase C; Provisional	NA|714aa|up_0|NZ_CP009533.1_1973988_1976130_-	PRK13557, PRK13557, histidine kinase; Provisional	NA|244aa|down_0|NZ_CP009533.1_1977551_1978283_-	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|257aa|down_1|NZ_CP009533.1_1978416_1979187_-	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs	NA|526aa|down_2|NZ_CP009533.1_1979226_1980804_-	COG4172, COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]	NA|341aa|down_3|NZ_CP009533.1_1980932_1981955_-	COG4239, COG4239, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|354aa|down_4|NZ_CP009533.1_1981951_1983013_-	COG4174, COG4174, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|616aa|down_5|NZ_CP009533.1_1983012_1984860_-	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|94aa|down_6|NZ_CP009533.1_1984977_1985259_-	PRK15441, PRK15441, peptidyl-prolyl cis-trans isomerase C; Provisional	NA|436aa|down_7|NZ_CP009533.1_1985347_1986655_-	PRK09228, PRK09228, guanine deaminase; Provisional	NA|289aa|down_8|NZ_CP009533.1_1986651_1987518_-	TIGR02964, conserved_hypothetical_protein, xanthine dehydrogenase accessory protein XdhC	NA|792aa|down_9|NZ_CP009533.1_1987510_1989886_-	TIGR02965, xanthine_dehydrogenase, xanthine dehydrogenase, molybdopterin binding subunit
GCF_000761155.1_ASM76115v1	NZ_CP009533	Pseudomonas rhizosphaerae strain DSM 16299 chromosome, complete genome	5	1999603-1999714	5	CRISPRCasFinder	no		DinG,DEDDh,csa3,cas3	Orphan	CCGCCGACGCGGCTCGCGCCGCTGCTACA	29	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,csa3,cas3	NA,NA	NA|616aa|up_9|NZ_CP009533.1_1983012_1984860_-	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|94aa|up_8|NZ_CP009533.1_1984977_1985259_-	PRK15441, PRK15441, peptidyl-prolyl cis-trans isomerase C; Provisional	NA|436aa|up_7|NZ_CP009533.1_1985347_1986655_-	PRK09228, PRK09228, guanine deaminase; Provisional	NA|289aa|up_6|NZ_CP009533.1_1986651_1987518_-	TIGR02964, conserved_hypothetical_protein, xanthine dehydrogenase accessory protein XdhC	NA|792aa|up_5|NZ_CP009533.1_1987510_1989886_-	TIGR02965, xanthine_dehydrogenase, xanthine dehydrogenase, molybdopterin binding subunit	NA|485aa|up_4|NZ_CP009533.1_1989878_1991333_-	TIGR02963, Includes:_Xanthine_dehydrogenase, xanthine dehydrogenase, small subunit	NA|220aa|up_3|NZ_CP009533.1_1991588_1992248_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|1163aa|up_2|NZ_CP009533.1_1992250_1995739_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|308aa|up_1|NZ_CP009533.1_1995930_1996854_+	PRK00269, zipA, cell division protein ZipA; Reviewed	NA|781aa|up_0|NZ_CP009533.1_1997041_1999384_+	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|389aa|down_0|NZ_CP009533.1_1999939_2001106_+	pfam15887, Peptidase_Mx, Putative zinc-binding metallo-peptidase	NA|161aa|down_1|NZ_CP009533.1_2001385_2001868_-	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase	NA|320aa|down_2|NZ_CP009533.1_2003689_2004649_+	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated	NA|109aa|down_3|NZ_CP009533.1_2004723_2005050_+	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|345aa|down_4|NZ_CP009533.1_2005500_2006535_+	cd05288, PGDH, Prostaglandin dehydrogenases	NA|201aa|down_5|NZ_CP009533.1_2006600_2007203_+	PRK00076, recR, recombination protein RecR; Reviewed	NA|293aa|down_6|NZ_CP009533.1_2007491_2008370_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|110aa|down_7|NZ_CP009533.1_2008388_2008718_-	pfam07119, DUF1375, Protein of unknown function (DUF1375)	NA|357aa|down_8|NZ_CP009533.1_2009090_2010161_+	PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional	NA|299aa|down_9|NZ_CP009533.1_2010157_2011054_+	PRK09987, PRK09987, dTDP-4-dehydrorhamnose reductase; Provisional
GCF_000761155.1_ASM76115v1	NZ_CP009533	Pseudomonas rhizosphaerae strain DSM 16299 chromosome, complete genome	6	2001158-2001275	6	CRISPRCasFinder	no		DinG,DEDDh,csa3,cas3	Orphan	AGCGGGCTCTGCCCGCGAAGAGGCCCTCCCAGTCACC	37	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,csa3,cas3	NA,NA	NA|94aa|up_9|NZ_CP009533.1_1984977_1985259_-	PRK15441, PRK15441, peptidyl-prolyl cis-trans isomerase C; Provisional	NA|436aa|up_8|NZ_CP009533.1_1985347_1986655_-	PRK09228, PRK09228, guanine deaminase; Provisional	NA|289aa|up_7|NZ_CP009533.1_1986651_1987518_-	TIGR02964, conserved_hypothetical_protein, xanthine dehydrogenase accessory protein XdhC	NA|792aa|up_6|NZ_CP009533.1_1987510_1989886_-	TIGR02965, xanthine_dehydrogenase, xanthine dehydrogenase, molybdopterin binding subunit	NA|485aa|up_5|NZ_CP009533.1_1989878_1991333_-	TIGR02963, Includes:_Xanthine_dehydrogenase, xanthine dehydrogenase, small subunit	NA|220aa|up_4|NZ_CP009533.1_1991588_1992248_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|1163aa|up_3|NZ_CP009533.1_1992250_1995739_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|308aa|up_2|NZ_CP009533.1_1995930_1996854_+	PRK00269, zipA, cell division protein ZipA; Reviewed	NA|781aa|up_1|NZ_CP009533.1_1997041_1999384_+	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|389aa|up_0|NZ_CP009533.1_1999939_2001106_+	pfam15887, Peptidase_Mx, Putative zinc-binding metallo-peptidase	NA|161aa|down_0|NZ_CP009533.1_2001385_2001868_-	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase	NA|320aa|down_1|NZ_CP009533.1_2003689_2004649_+	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated	NA|109aa|down_2|NZ_CP009533.1_2004723_2005050_+	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|345aa|down_3|NZ_CP009533.1_2005500_2006535_+	cd05288, PGDH, Prostaglandin dehydrogenases	NA|201aa|down_4|NZ_CP009533.1_2006600_2007203_+	PRK00076, recR, recombination protein RecR; Reviewed	NA|293aa|down_5|NZ_CP009533.1_2007491_2008370_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|110aa|down_6|NZ_CP009533.1_2008388_2008718_-	pfam07119, DUF1375, Protein of unknown function (DUF1375)	NA|357aa|down_7|NZ_CP009533.1_2009090_2010161_+	PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional	NA|299aa|down_8|NZ_CP009533.1_2010157_2011054_+	PRK09987, PRK09987, dTDP-4-dehydrorhamnose reductase; Provisional	NA|482aa|down_9|NZ_CP009533.1_2011311_2012757_+	TIGR01479, Mannose-1-phosphate_guanylyltransferase, mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
GCF_000761155.1_ASM76115v1	NZ_CP009533	Pseudomonas rhizosphaerae strain DSM 16299 chromosome, complete genome	7	2003682-2003815	7	CRISPRCasFinder	no		DinG,DEDDh,csa3,cas3	Orphan	CCCCGCAGATCAAAAGACAGACCACCCCCACAGCCGGCCTCCAGCGGA	48	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,csa3,cas3	NA,NA	NA|436aa|up_9|NZ_CP009533.1_1985347_1986655_-	PRK09228, PRK09228, guanine deaminase; Provisional	NA|289aa|up_8|NZ_CP009533.1_1986651_1987518_-	TIGR02964, conserved_hypothetical_protein, xanthine dehydrogenase accessory protein XdhC	NA|792aa|up_7|NZ_CP009533.1_1987510_1989886_-	TIGR02965, xanthine_dehydrogenase, xanthine dehydrogenase, molybdopterin binding subunit	NA|485aa|up_6|NZ_CP009533.1_1989878_1991333_-	TIGR02963, Includes:_Xanthine_dehydrogenase, xanthine dehydrogenase, small subunit	NA|220aa|up_5|NZ_CP009533.1_1991588_1992248_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|1163aa|up_4|NZ_CP009533.1_1992250_1995739_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|308aa|up_3|NZ_CP009533.1_1995930_1996854_+	PRK00269, zipA, cell division protein ZipA; Reviewed	NA|781aa|up_2|NZ_CP009533.1_1997041_1999384_+	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|389aa|up_1|NZ_CP009533.1_1999939_2001106_+	pfam15887, Peptidase_Mx, Putative zinc-binding metallo-peptidase	NA|161aa|up_0|NZ_CP009533.1_2001385_2001868_-	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase	NA|109aa|down_0|NZ_CP009533.1_2004723_2005050_+	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|345aa|down_1|NZ_CP009533.1_2005500_2006535_+	cd05288, PGDH, Prostaglandin dehydrogenases	NA|201aa|down_2|NZ_CP009533.1_2006600_2007203_+	PRK00076, recR, recombination protein RecR; Reviewed	NA|293aa|down_3|NZ_CP009533.1_2007491_2008370_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|110aa|down_4|NZ_CP009533.1_2008388_2008718_-	pfam07119, DUF1375, Protein of unknown function (DUF1375)	NA|357aa|down_5|NZ_CP009533.1_2009090_2010161_+	PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional	NA|299aa|down_6|NZ_CP009533.1_2010157_2011054_+	PRK09987, PRK09987, dTDP-4-dehydrorhamnose reductase; Provisional	NA|482aa|down_7|NZ_CP009533.1_2011311_2012757_+	TIGR01479, Mannose-1-phosphate_guanylyltransferase, mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA|454aa|down_8|NZ_CP009533.1_2012898_2014260_+	PRK15414, PRK15414, phosphomannomutase	NA|265aa|down_9|NZ_CP009533.1_2014262_2015057_+	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
GCF_000761155.1_ASM76115v1	NZ_CP009533	Pseudomonas rhizosphaerae strain DSM 16299 chromosome, complete genome	8	2176369-2176520	8	CRISPRCasFinder	no		DinG,DEDDh,csa3,cas3	Orphan	GATCAGCGTGCATCCGTAGGAGCGGTCATCGGCCGCGAAGGGCATGGC	48	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,csa3,cas3	NA|102aa|up_3|NZ_CP009533.1_2171721_2172027_-,NA	NA|355aa|up_9|NZ_CP009533.1_2164327_2165392_-	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|355aa|up_8|NZ_CP009533.1_2165404_2166469_-	cd13589, PBP2_polyamine_RpCGA009, The periplasmic-binding component of an uncharacterized ABC transport system from Rhodopseudomonas palustris CGA009 and related proteins; contains the type 2 periplasmic-binding fold	NA|253aa|up_7|NZ_CP009533.1_2166733_2167492_-	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily	NA|458aa|up_6|NZ_CP009533.1_2167861_2169235_-	pfam11892, DUF3412, Domain of unknown function (DUF3412)	NA|240aa|up_5|NZ_CP009533.1_2169641_2170361_+	COG1183, PssA, Phosphatidylserine synthase [Lipid metabolism]	NA|377aa|up_4|NZ_CP009533.1_2170370_2171501_-	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller	NA|102aa|up_3|NZ_CP009533.1_2171721_2172027_-	NA	NA|358aa|up_2|NZ_CP009533.1_2172144_2173218_-	COG1289, COG1289, Predicted membrane protein [Function unknown]	NA|604aa|up_1|NZ_CP009533.1_2173336_2175148_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|303aa|up_0|NZ_CP009533.1_2175405_2176314_+	PRK00971, PRK00971, glutaminase; Provisional	NA|202aa|down_0|NZ_CP009533.1_2176624_2177230_+	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold	NA|165aa|down_1|NZ_CP009533.1_2177229_2177724_+	pfam04314, PCuAC, Copper chaperone PCu(A)C	NA|177aa|down_2|NZ_CP009533.1_2177771_2178302_-	cd01043, DPS, DPS protein, ferritin-like diiron-binding domain	NA|475aa|down_3|NZ_CP009533.1_2178396_2179821_-	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase	NA|225aa|down_4|NZ_CP009533.1_2179813_2180488_-	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator	NA|156aa|down_5|NZ_CP009533.1_2180622_2181090_+	pfam03928, Haem_degrading, Haem-degrading	NA|134aa|down_6|NZ_CP009533.1_2181104_2181506_+	TIGR02962, Probable_5-hydroxyisourate_hydrolase_R09H10	NA|323aa|down_7|NZ_CP009533.1_2181680_2182649_+	COG1975, XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family [Posttranslational modification, protein turnover, chaperones]	NA|756aa|down_8|NZ_CP009533.1_2182643_2184911_-	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|378aa|down_9|NZ_CP009533.1_2185215_2186349_+	pfam02595, Gly_kinase, Glycerate kinase family
GCF_000761155.1_ASM76115v1	NZ_CP009533	Pseudomonas rhizosphaerae strain DSM 16299 chromosome, complete genome	9	3417476-3417633	9	CRISPRCasFinder	no		DinG,DEDDh,csa3,cas3	Orphan	AATCGGGGCCAACCGTGGGAGCGGTCATCGGCCGCGAAGAATGCGCCGCGGTTTG	55	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,csa3,cas3	NA,NA|229aa|down_0|NZ_CP009533.1_3417739_3418426_+	NA|93aa|up_9|NZ_CP009533.1_3407443_3407722_+	pfam05015, HigB-like_toxin, RelE-like toxin of type II toxin-antitoxin system HigB	NA|97aa|up_8|NZ_CP009533.1_3407735_3408026_+	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family	NA|341aa|up_7|NZ_CP009533.1_3408037_3409060_-	COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism]	NA|209aa|up_6|NZ_CP009533.1_3409296_3409923_-	cd03189, GST_C_GTT1_like, C-terminal, alpha helical domain of GTT1-like Glutathione S-transferases	NA|351aa|up_5|NZ_CP009533.1_3410217_3411270_+	cd13589, PBP2_polyamine_RpCGA009, The periplasmic-binding component of an uncharacterized ABC transport system from Rhodopseudomonas palustris CGA009 and related proteins; contains the type 2 periplasmic-binding fold	NA|307aa|up_4|NZ_CP009533.1_3411373_3412294_+	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]	NA|266aa|up_3|NZ_CP009533.1_3412293_3413091_+	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]	NA|487aa|up_2|NZ_CP009533.1_3413227_3414688_+	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like	NA|363aa|up_1|NZ_CP009533.1_3414825_3415914_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|431aa|up_0|NZ_CP009533.1_3416122_3417415_+	COG0160, GabT, 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]	NA|229aa|down_0|NZ_CP009533.1_3417739_3418426_+	NA	NA|164aa|down_1|NZ_CP009533.1_3418464_3418956_+	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|237aa|down_2|NZ_CP009533.1_3419031_3419742_-	cd02227, cupin_TM1112-like, Thermotoga maritima TM1112 and related proteins, cupin domain	NA|428aa|down_3|NZ_CP009533.1_3419772_3421056_-	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|235aa|down_4|NZ_CP009533.1_3421102_3421807_-	cd02588, HAD_L2-DEX, L-2-haloacid dehalogenase	NA|316aa|down_5|NZ_CP009533.1_3421946_3422894_-	TIGR03418, chol_sulf_TF, putative choline sulfate-utilization transcription factor	NA|476aa|down_6|NZ_CP009533.1_3423090_3424518_+	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like	NA|558aa|down_7|NZ_CP009533.1_3424636_3426310_-	TIGR01810, Oxygen-dependent_choline_dehydrogenase, choline dehydrogenase	NA|346aa|down_8|NZ_CP009533.1_3426323_3427361_-	cd13589, PBP2_polyamine_RpCGA009, The periplasmic-binding component of an uncharacterized ABC transport system from Rhodopseudomonas palustris CGA009 and related proteins; contains the type 2 periplasmic-binding fold	NA|306aa|down_9|NZ_CP009533.1_3427661_3428579_-	cd08479, PBP2_CrgA_like_9, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold
GCF_000761155.1_ASM76115v1	NZ_CP009533	Pseudomonas rhizosphaerae strain DSM 16299 chromosome, complete genome	10	3728905-3728992	10	CRISPRCasFinder	no		DinG,DEDDh,csa3,cas3	Orphan	GACGCGGCTCGCGCCGCTGCTACA	24	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,csa3,cas3	NA|245aa|up_9|NZ_CP009533.1_3720464_3721199_-,NA	NA|245aa|up_9|NZ_CP009533.1_3720464_3721199_-	NA	NA|127aa|up_8|NZ_CP009533.1_3721258_3721639_-	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase	NA|704aa|up_7|NZ_CP009533.1_3721670_3723782_-	PRK11092, PRK11092, bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase	NA|88aa|up_6|NZ_CP009533.1_3723845_3724109_-	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed	NA|207aa|up_5|NZ_CP009533.1_3724206_3724827_-	PRK00300, gmk, guanylate kinase; Provisional	NA|288aa|up_4|NZ_CP009533.1_3724839_3725703_-	PRK11820, PRK11820, YicC family protein	NA|241aa|up_3|NZ_CP009533.1_3725868_3726591_+	PRK00173, rph, ribonuclease PH; Reviewed	NA|260aa|up_2|NZ_CP009533.1_3726748_3727528_-	cd10281, Nape_like_AP-endo, Neisseria meningitides Nape-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|214aa|up_1|NZ_CP009533.1_3727610_3728252_+	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated	NA|182aa|up_0|NZ_CP009533.1_3728310_3728856_+	PRK11448, hsdR, type I restriction enzyme EcoKI subunit R; Provisional	NA|302aa|down_0|NZ_CP009533.1_3729093_3729999_-	PRK00942, PRK00942, acetylglutamate kinase; Provisional	NA|840aa|down_1|NZ_CP009533.1_3730023_3732543_-	cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e	NA|152aa|down_2|NZ_CP009533.1_3732611_3733067_-	PRK00601, dut, dUTP diphosphatase	NA|403aa|down_3|NZ_CP009533.1_3733075_3734284_-	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|225aa|down_4|NZ_CP009533.1_3734418_3735093_+	PRK00024, PRK00024, DNA repair protein RadC	NA|530aa|down_5|NZ_CP009533.1_3735132_3736722_-	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold	NA|78aa|down_6|NZ_CP009533.1_3737095_3737329_+	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|52aa|down_7|NZ_CP009533.1_3737341_3737497_+	PRK00595, rpmG, 50S ribosomal protein L33; Validated	NA|121aa|down_8|NZ_CP009533.1_3737614_3737977_-	COG3450, COG3450, Predicted enzyme of the cupin superfamily [General function prediction only]	NA|498aa|down_9|NZ_CP009533.1_3738140_3739634_+	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like
GCF_000761155.1_ASM76115v1	NZ_CP009533	Pseudomonas rhizosphaerae strain DSM 16299 chromosome, complete genome	11	3831577-3831684	11	CRISPRCasFinder	no		DinG,DEDDh,csa3,cas3	Orphan	CCCTGTAGCAGCGGCGTGAGCCGCGTCCG	29	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,csa3,cas3	NA,NA	NA|277aa|up_9|NZ_CP009533.1_3821523_3822354_-	PRK10160, PRK10160, taurine ABC transporter permease TauC	NA|279aa|up_8|NZ_CP009533.1_3822350_3823187_-	PRK11248, tauB, taurine ABC transporter ATP-binding subunit	NA|327aa|up_7|NZ_CP009533.1_3823215_3824196_-	COG4521, TauA, ABC-type taurine transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|447aa|up_6|NZ_CP009533.1_3824611_3825952_+	pfam03573, OprD, outer membrane porin, OprD family	NA|213aa|up_5|NZ_CP009533.1_3826104_3826743_+	cd03016, PRX_1cys, Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine	NA|198aa|up_4|NZ_CP009533.1_3826987_3827581_+	PRK10569, PRK10569, NAD(P)H-dependent FMN reductase; Provisional	NA|322aa|up_3|NZ_CP009533.1_3827686_3828652_+	cd13557, PBP2_SsuA, Substrate binding domain of sulfonate binding protein, a member of the type 2 periplasmic binding fold superfamily	NA|383aa|up_2|NZ_CP009533.1_3828728_3829877_+	PRK00719, PRK00719, alkanesulfonate monooxygenase; Provisional	NA|263aa|up_1|NZ_CP009533.1_3829886_3830675_+	PRK11365, ssuC, aliphatic sulfonate ABC transporter permease SsuC	NA|271aa|up_0|NZ_CP009533.1_3830671_3831484_+	PRK11247, ssuB, aliphatic sulfonates transport ATP-binding subunit; Provisional	NA|459aa|down_0|NZ_CP009533.1_3831736_3833113_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|453aa|down_1|NZ_CP009533.1_3833682_3835041_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|455aa|down_2|NZ_CP009533.1_3835057_3836422_+	PRK07480, PRK07480, putative aminotransferase; Validated	NA|366aa|down_3|NZ_CP009533.1_3836635_3837733_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|365aa|down_4|NZ_CP009533.1_3837928_3839023_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|381aa|down_5|NZ_CP009533.1_3839079_3840222_+	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|294aa|down_6|NZ_CP009533.1_3840257_3841139_+	PRK10683, PRK10683, putrescine transporter subunit: membrane component of ABC superfamily; Provisional	NA|295aa|down_7|NZ_CP009533.1_3841135_3842020_+	PRK10592, PRK10592, putrescine transporter subunit: membrane component of ABC superfamily; Provisional	NA|308aa|down_8|NZ_CP009533.1_3842188_3843112_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|251aa|down_9|NZ_CP009533.1_3843177_3843930_-	pfam09832, DUF2059, Uncharacterized protein conserved in bacteria (DUF2059)
GCF_000761155.1_ASM76115v1	NZ_CP009533	Pseudomonas rhizosphaerae strain DSM 16299 chromosome, complete genome	12	4279992-4280072	12	CRISPRCasFinder	no		DinG,DEDDh,csa3,cas3	Orphan	GGAGCGGGCTCTGCCCGCGAAGATC	25	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,csa3,cas3	NA,NA|140aa|down_3|NZ_CP009533.1_4283132_4283552_-	NA|336aa|up_9|NZ_CP009533.1_4268283_4269291_-	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]	NA|443aa|up_8|NZ_CP009533.1_4269544_4270873_-	PRK14325, PRK14325, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional	NA|109aa|up_7|NZ_CP009533.1_4271006_4271333_+	pfam08850, DUF1820, Domain of unknown function (DUF1820)	NA|185aa|up_6|NZ_CP009533.1_4271357_4271912_-	sd00010, SLR, Sel1-like repeat	NA|428aa|up_5|NZ_CP009533.1_4272227_4273511_-	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase	NA|209aa|up_4|NZ_CP009533.1_4273528_4274155_-	PRK00043, thiE, thiamine phosphate synthase	NA|266aa|up_3|NZ_CP009533.1_4274189_4274987_-	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|809aa|up_2|NZ_CP009533.1_4275311_4277738_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|490aa|up_1|NZ_CP009533.1_4277818_4279288_+	PRK08292, PRK08292, AMP nucleosidase; Provisional	NA|189aa|up_0|NZ_CP009533.1_4279406_4279973_+	cd02566, PseudoU_synth_RluE, Pseudouridine synthase, Escherichia coli RluE	NA|160aa|down_0|NZ_CP009533.1_4280097_4280577_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|337aa|down_1|NZ_CP009533.1_4281051_4282062_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|290aa|down_2|NZ_CP009533.1_4282254_4283124_-	PRK09509, fieF, CDF family cation-efflux pump FieF	NA|140aa|down_3|NZ_CP009533.1_4283132_4283552_-	NA	NA|146aa|down_4|NZ_CP009533.1_4283835_4284273_+	COG1238, COG1238, Predicted membrane protein [Function unknown]	NA|841aa|down_5|NZ_CP009533.1_4284351_4286874_+	TIGR01970, ATP-dependent_RNA_helicase_HrpB, ATP-dependent helicase HrpB	NA|288aa|down_6|NZ_CP009533.1_4287042_4287906_+	TIGR03339, phn_lysR, aminoethylphosphonate catabolism associated LysR family transcriptional regulator	NA|359aa|down_7|NZ_CP009533.1_4288050_4289127_+	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein	NA|575aa|down_8|NZ_CP009533.1_4289126_4290851_+	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein	NA|276aa|down_9|NZ_CP009533.1_4290866_4291694_+	PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional
GCF_000761155.1_ASM76115v1	NZ_CP009533	Pseudomonas rhizosphaerae strain DSM 16299 chromosome, complete genome	13	4313722-4313914	1	PILER-CR	no	DEDDh	DinG,DEDDh,csa3,cas3	Unclear	CTGTGGGAGCGGGTCTCTGCCCGCGAAGAGGCCGGCACTGACACCCC	47	0	0	NA	NA	NA	2	2	Orphan	DinG,DEDDh,csa3,cas3	NA,NA	NA|505aa|up_9|NZ_CP009533.1_4304655_4306170_-	COG3845, COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only]	NA|364aa|up_8|NZ_CP009533.1_4306166_4307258_-	cd19963, PBP1_BMP-like, periplasmic binding component of a basic membrane lipoprotein (BMP) from Brucella abortus and its close homologs in other bacteria	NA|295aa|up_7|NZ_CP009533.1_4307470_4308355_-	TIGR03613, RutR, pyrimidine utilization regulatory protein R	NA|361aa|up_6|NZ_CP009533.1_4308472_4309555_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|247aa|up_5|NZ_CP009533.1_4309554_4310295_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|128aa|up_4|NZ_CP009533.1_4310305_4310689_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|261aa|up_3|NZ_CP009533.1_4310709_4311492_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|172aa|up_2|NZ_CP009533.1_4311488_4312004_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|218aa|up_1|NZ_CP009533.1_4312017_4312671_-	PRK02868, PRK02868, hypothetical protein; Provisional	NA|239aa|up_0|NZ_CP009533.1_4312892_4313609_+	pfam09849, DUF2076, Uncharacterized protein conserved in bacteria (DUF2076)	NA|160aa|down_0|NZ_CP009533.1_4313982_4314462_+	cd10911, PIN_LabA, PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins	DEDDh|204aa|down_1|NZ_CP009533.1_4314474_4315086_+	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	NA|296aa|down_2|NZ_CP009533.1_4315176_4316064_+	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional	NA|445aa|down_3|NZ_CP009533.1_4316115_4317450_+	PRK10590, PRK10590, ATP-dependent RNA helicase RhlE; Provisional	NA|409aa|down_4|NZ_CP009533.1_4317573_4318800_-	TIGR03862, flavo_PP4765, uncharacterized flavoprotein, PP_4765 family	NA|305aa|down_5|NZ_CP009533.1_4319138_4320053_-	pfam03956, Lys_export, Lysine exporter LysO	NA|580aa|down_6|NZ_CP009533.1_4320207_4321947_-	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]	NA|540aa|down_7|NZ_CP009533.1_4321943_4323563_-	smart00797, AHS2, Allophanate hydrolase subunit 2	NA|269aa|down_8|NZ_CP009533.1_4323572_4324379_-	PRK05463, PRK05463, putative hydro-lyase	NA|257aa|down_9|NZ_CP009533.1_4324375_4325146_-	PRK05406, PRK05406, 5-oxoprolinase subunit PxpA
GCF_000761155.1_ASM76115v1	NZ_CP009533	Pseudomonas rhizosphaerae strain DSM 16299 chromosome, complete genome	14	4367504-4367625	13	CRISPRCasFinder	no		DinG,DEDDh,csa3,cas3	Orphan	CCCTGTAGCAGCGGCGCAAGCCGCGTCGGCGGTCCC	36	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,csa3,cas3	NA,NA|113aa|down_7|NZ_CP009533.1_4380707_4381046_+	NA|375aa|up_9|NZ_CP009533.1_4356533_4357658_-	COG2813, RsmC, 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis]	NA|259aa|up_8|NZ_CP009533.1_4357893_4358670_+	cd06195, FNR1, Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin	NA|151aa|up_7|NZ_CP009533.1_4359084_4359537_-	PRK00567, mscL, large-conductance mechanosensitive channel protein MscL	NA|456aa|up_6|NZ_CP009533.1_4359748_4361116_+	PRK11823, PRK11823, DNA repair protein RadA; Provisional	NA|412aa|up_5|NZ_CP009533.1_4361267_4362503_+	PRK06133, PRK06133, glutamate carboxypeptidase; Reviewed	NA|231aa|up_4|NZ_CP009533.1_4362609_4363302_+	cd07529, HAD_AtGPP-like, subfamily of beta-phosphoglucomutase-like family, similar to Arabidopsis thaliana Gpp1 and Gpp2	NA|123aa|up_3|NZ_CP009533.1_4363479_4363848_-	pfam07238, PilZ, PilZ domain	NA|689aa|up_2|NZ_CP009533.1_4364020_4366087_+	PRK15015, PRK15015, carbon starvation protein CstA	NA|66aa|up_1|NZ_CP009533.1_4366105_4366303_+	COG2879, COG2879, Uncharacterized small protein [Function unknown]	NA|327aa|up_0|NZ_CP009533.1_4366428_4367409_+	PRK11537, PRK11537, putative GTP-binding protein YjiA; Provisional	NA|418aa|down_0|NZ_CP009533.1_4367697_4368951_-	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|1153aa|down_1|NZ_CP009533.1_4369179_4372638_-	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|555aa|down_2|NZ_CP009533.1_4373019_4374684_+	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|166aa|down_3|NZ_CP009533.1_4374747_4375245_-	PRK06342, PRK06342, transcription elongation factor GreA	NA|618aa|down_4|NZ_CP009533.1_4375471_4377325_-	pfam13387, DUF4105, Domain of unknown function (DUF4105)	NA|163aa|down_5|NZ_CP009533.1_4377392_4377881_-	pfam11220, DUF3015, Protein of unknown function (DUF3015)	NA|814aa|down_6|NZ_CP009533.1_4378106_4380548_+	pfam13654, AAA_32, AAA domain	NA|113aa|down_7|NZ_CP009533.1_4380707_4381046_+	NA	NA|163aa|down_8|NZ_CP009533.1_4381147_4381636_+	PRK05208, PRK05208, hypothetical protein; Provisional	NA|206aa|down_9|NZ_CP009533.1_4381777_4382395_+	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]
GCF_000761155.1_ASM76115v1	NZ_CP009533	Pseudomonas rhizosphaerae strain DSM 16299 chromosome, complete genome	15	4382469-4382556	14	CRISPRCasFinder	no		DinG,DEDDh,csa3,cas3	Orphan	CCTGTAGCAGCGGCGCAAGCCGCGTC	26	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,csa3,cas3	NA|113aa|up_2|NZ_CP009533.1_4380707_4381046_+,NA|81aa|down_0|NZ_CP009533.1_4382591_4382834_-	NA|418aa|up_9|NZ_CP009533.1_4367697_4368951_-	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|1153aa|up_8|NZ_CP009533.1_4369179_4372638_-	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|555aa|up_7|NZ_CP009533.1_4373019_4374684_+	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|166aa|up_6|NZ_CP009533.1_4374747_4375245_-	PRK06342, PRK06342, transcription elongation factor GreA	NA|618aa|up_5|NZ_CP009533.1_4375471_4377325_-	pfam13387, DUF4105, Domain of unknown function (DUF4105)	NA|163aa|up_4|NZ_CP009533.1_4377392_4377881_-	pfam11220, DUF3015, Protein of unknown function (DUF3015)	NA|814aa|up_3|NZ_CP009533.1_4378106_4380548_+	pfam13654, AAA_32, AAA domain	NA|113aa|up_2|NZ_CP009533.1_4380707_4381046_+	NA	NA|163aa|up_1|NZ_CP009533.1_4381147_4381636_+	PRK05208, PRK05208, hypothetical protein; Provisional	NA|206aa|up_0|NZ_CP009533.1_4381777_4382395_+	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]	NA|81aa|down_0|NZ_CP009533.1_4382591_4382834_-	NA	NA|114aa|down_1|NZ_CP009533.1_4382977_4383319_-	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism]	NA|323aa|down_2|NZ_CP009533.1_4383468_4384437_-	PRK10888, PRK10888, octaprenyl diphosphate synthase; Provisional	NA|105aa|down_3|NZ_CP009533.1_4384768_4385083_+	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|86aa|down_4|NZ_CP009533.1_4385117_4385375_+	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|407aa|down_5|NZ_CP009533.1_4385560_4386781_+	PRK12298, obgE, GTPase CgtA; Reviewed	NA|373aa|down_6|NZ_CP009533.1_4386974_4388093_+	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|154aa|down_7|NZ_CP009533.1_4388112_4388574_+	PRK10756, PRK10756, protein CreA	NA|93aa|down_8|NZ_CP009533.1_4388738_4389017_-	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|513aa|down_9|NZ_CP009533.1_4389269_4390808_+	COG0728, MviN, Uncharacterized membrane protein, putative virulence factor [General function prediction only]
