assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000761115.1_ASM76111v1	NZ_CP009472	Lactococcus lactis strain AI06 chromosome, complete genome	1	778363-778457	1	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG	Orphan	AGCTGATAATTCTGTCAGTAGCGATTG	27	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG	NA|46aa|up_9|NZ_CP009472.1_767182_767320_-,NA|115aa|down_1|NZ_CP009472.1_781168_781513_+	NA|46aa|up_9|NZ_CP009472.1_767182_767320_-	NA	NA|371aa|up_8|NZ_CP009472.1_767513_768626_-	TIGR01928, o-succinylbenzoate_synthase, o-succinylbenzoate synthase	NA|452aa|up_7|NZ_CP009472.1_768622_769978_-	TIGR01923, 2-succinylbenzoate--CoA_ligase, O-succinylbenzoate-CoA ligase	NA|281aa|up_6|NZ_CP009472.1_770104_770947_-	PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated	NA|270aa|up_5|NZ_CP009472.1_771478_772288_-	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	NA|561aa|up_4|NZ_CP009472.1_772284_773967_-	COG1165, MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism]	NA|405aa|up_3|NZ_CP009472.1_774020_775235_-	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|194aa|up_2|NZ_CP009472.1_775446_776028_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|427aa|up_1|NZ_CP009472.1_776034_777315_+	COG4109, COG4109, Predicted transcriptional regulator containing CBS domains [Transcription]	NA|308aa|up_0|NZ_CP009472.1_777334_778258_+	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|323aa|down_0|NZ_CP009472.1_778531_779500_-	cd08964, L-asparaginase_II, Type II (periplasmic) bacterial L-asparaginase	NA|115aa|down_1|NZ_CP009472.1_781168_781513_+	NA	NA|504aa|down_2|NZ_CP009472.1_781573_783085_+	COG2268, COG2268, Uncharacterized protein conserved in bacteria [Function unknown]	NA|451aa|down_3|NZ_CP009472.1_783121_784474_-	PRK09034, PRK09034, aspartate kinase; Reviewed	NA|223aa|down_4|NZ_CP009472.1_784783_785452_+	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]	NA|655aa|down_5|NZ_CP009472.1_785545_787510_+	COG3887, COG3887, Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]	NA|151aa|down_6|NZ_CP009472.1_787506_787959_+	PRK00137, rplI, 50S ribosomal protein L9; Reviewed	NA|456aa|down_7|NZ_CP009472.1_787964_789332_+	PRK05748, PRK05748, replicative DNA helicase; Provisional	NA|86aa|down_8|NZ_CP009472.1_789525_789783_+	COG4466, Veg, Uncharacterized protein conserved in bacteria [Function unknown]	NA|258aa|down_9|NZ_CP009472.1_789851_790625_+	COG0510, ycfN, Thiamine kinase and related kinases [Coenzyme transport and metabolism]
GCF_000761115.1_ASM76111v1	NZ_CP009472	Lactococcus lactis strain AI06 chromosome, complete genome	2	1126372-1126464	2	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG	Orphan	AATGCGATTAACATGAGCATTTTAT	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG	NA|185aa|up_3|NZ_CP009472.1_1121835_1122390_+,NA	NA|404aa|up_9|NZ_CP009472.1_1115241_1116453_-	COG4260, COG4260, Membrane protease subunit, stomatin/prohibitin family [Amino acid    transport and metabolism]	NA|313aa|up_8|NZ_CP009472.1_1116619_1117558_-	pfam05448, AXE1, Acetyl xylan esterase (AXE1)	NA|309aa|up_7|NZ_CP009472.1_1117656_1118583_+	cd19606, GH113-like, Glycoside hydrolase family 113 beta-mannosidase and similar proteins	NA|440aa|up_6|NZ_CP009472.1_1118698_1120018_+	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|300aa|up_5|NZ_CP009472.1_1120103_1121003_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|280aa|up_4|NZ_CP009472.1_1120999_1121839_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|185aa|up_3|NZ_CP009472.1_1121835_1122390_+	NA	NA|481aa|up_2|NZ_CP009472.1_1122382_1123825_+	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|239aa|up_1|NZ_CP009472.1_1123881_1124598_+	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|455aa|up_0|NZ_CP009472.1_1124760_1126125_+	cd17503, MFS_LmrB_MDR_like, Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|263aa|down_0|NZ_CP009472.1_1126525_1127314_+	cd06218, DHOD_e_trans, FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase	NA|312aa|down_1|NZ_CP009472.1_1127384_1128320_+	PRK07259, PRK07259, dihydroorotate dehydrogenase	NA|238aa|down_2|NZ_CP009472.1_1128457_1129171_+	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase	NA|157aa|down_3|NZ_CP009472.1_1129172_1129643_+	COG3071, HemY, Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism]	NA|239aa|down_4|NZ_CP009472.1_1129652_1130369_-	COG0357, GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane]	NA|320aa|down_5|NZ_CP009472.1_1130365_1131325_-	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|177aa|down_6|NZ_CP009472.1_1131315_1131846_-	COG4769, COG4769, Predicted membrane protein [Function unknown]	NA|136aa|down_7|NZ_CP009472.1_1131842_1132250_-	COG5341, COG5341, Uncharacterized protein conserved in bacteria [Function unknown]	NA|314aa|down_8|NZ_CP009472.1_1132320_1133262_-	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|342aa|down_9|NZ_CP009472.1_1133304_1134330_-	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
GCF_000761115.1_ASM76111v1	NZ_CP009472	Lactococcus lactis strain AI06 chromosome, complete genome	3	1786948-1787043	3	CRISPRCasFinder	no	csa3	cas3,DEDDh,csa3,DinG	Type I-A	TGATTTGCTGACAGTTCTGTCAGT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG	NA,NA|340aa|down_8|NZ_CP009472.1_1798880_1799900_-,NA|82aa|down_9|NZ_CP009472.1_1800235_1800481_-	NA|278aa|up_9|NZ_CP009472.1_1772277_1773111_-	TIGR01716, HTH-type_transcriptional_regulator_rgg, transcriptional activator, Rgg/GadR/MutR family, C-terminal domain	NA|247aa|up_8|NZ_CP009472.1_1773148_1773889_-	pfam01209, Ubie_methyltran, ubiE/COQ5 methyltransferase family	NA|902aa|up_7|NZ_CP009472.1_1773986_1776692_-	COG1511, COG1511, Predicted membrane protein [Function unknown]	NA|478aa|up_6|NZ_CP009472.1_1776950_1778384_-	PRK09593, arb, 6-phospho-beta-glucosidase; Reviewed	NA|89aa|up_5|NZ_CP009472.1_1778504_1778771_-	COG0759, COG0759, Uncharacterized conserved protein [Function unknown]	NA|581aa|up_4|NZ_CP009472.1_1778887_1780630_-	PRK12315, PRK12315, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	NA|457aa|up_3|NZ_CP009472.1_1780776_1782147_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|226aa|up_2|NZ_CP009472.1_1782240_1782918_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|325aa|up_1|NZ_CP009472.1_1783085_1784060_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|752aa|up_0|NZ_CP009472.1_1784212_1786468_-	PRK13807, PRK13807, maltose phosphorylase; Provisional	NA|525aa|down_0|NZ_CP009472.1_1788242_1789817_-	cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)	NA|202aa|down_1|NZ_CP009472.1_1789806_1790412_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|532aa|down_2|NZ_CP009472.1_1790438_1792034_-	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins	NA|585aa|down_3|NZ_CP009472.1_1792270_1794025_-	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins	NA|409aa|down_4|NZ_CP009472.1_1794392_1795619_+	cd13655, PBP2_oligosaccharide_1, The periplasmic binding component of ABC tansport system specific for an unknown oligosaccharide; possess the type 2 periplasmic binidng fold	NA|448aa|down_5|NZ_CP009472.1_1795735_1797079_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|289aa|down_6|NZ_CP009472.1_1797084_1797951_+	COG3833, MalG, ABC-type maltose transport systems, permease component [Carbohydrate transport and metabolism]	NA|192aa|down_7|NZ_CP009472.1_1798079_1798655_-	pfam02517, Abi, CAAX protease self-immunity	NA|340aa|down_8|NZ_CP009472.1_1798880_1799900_-	NA	NA|82aa|down_9|NZ_CP009472.1_1800235_1800481_-	NA
