The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP009472	Lactococcus lactis strain AI06 chromosome, complete genome	2398091	285463	295334	2398091	integrase	Lactococcus_phage(100.0%)	15	282272:282288	286692:286708
282272:282288	attL	CATGTTCTCAATTTTGC	NA	NA	NA	NA
WP_038598922.1|285463_286660_-|integrase	site-specific integrase	integrase	Q9AZI0	Lactococcus_phage	57.9	4.2e-128
WP_038598925.1|286742_287450_-	helix-turn-helix transcriptional regulator	NA	Q9AZH9	Lactococcus_phage	79.1	5.9e-98
286692:286708	attR	GCAAAATTGAGAACATG	NA	NA	NA	NA
WP_038598928.1|287887_288580_+	Rha family transcriptional regulator	NA	R9QNB1	Lactococcus_phage	89.5	8.4e-105
WP_010906219.1|288644_288815_+	DUF1655 domain-containing protein	NA	Q9AZH6	Lactococcus_phage	100.0	4.6e-25
WP_038598935.1|288816_289071_+	hypothetical protein	NA	Q9AZH5	Lactococcus_phage	97.8	2.4e-17
WP_038598940.1|289216_289486_+	hypothetical protein	NA	Q9AZH3	Lactococcus_phage	65.2	2.4e-23
WP_038598943.1|289497_291195_+	hypothetical protein	NA	Q9AZH2	Lactococcus_phage	97.9	2.0e-245
WP_038598946.1|291556_291889_+	DUF771 domain-containing protein	NA	A0A1B1IMW0	Lactococcus_phage	84.5	9.7e-51
WP_011675329.1|291992_292199_+	hypothetical protein	NA	Q9AZG9	Lactococcus_phage	98.5	2.8e-32
WP_038598953.1|292356_292713_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038598956.1|292709_292958_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038598959.1|293241_293412_+	hypothetical protein	NA	Q9AZG5	Lactococcus_phage	95.7	3.1e-05
WP_038598962.1|293555_293906_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038598965.1|294197_294830_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038598968.1|295103_295334_+	hypothetical protein	NA	A0A1P8BME4	Lactococcus_phage	94.7	2.1e-36
>prophage 2
NZ_CP009472	Lactococcus lactis strain AI06 chromosome, complete genome	2398091	414483	426613	2398091	tRNA	Streptococcus_phage(40.0%)	14	NA	NA
WP_038599179.1|414483_414801_+	thioredoxin family protein	NA	A0A0K2FIM3	Achromobacter_phage	30.4	4.5e-05
WP_038599182.1|414886_415513_+|tRNA	DUF4479 and tRNA-binding domain-containing protein	tRNA	NA	NA	NA	NA
WP_038599184.1|415675_417016_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_038599186.1|417105_417495_+	single-stranded DNA-binding protein	NA	A0A0K0MWE1	Streptococcus_phage	45.0	1.8e-24
WP_038599188.1|417614_417899_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	43.0	3.1e-13
WP_003131585.1|417985_419614_+	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	56.8	4.9e-156
WP_038599190.1|419658_420471_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	38.1	4.1e-34
WP_052053826.1|420641_422084_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	32.6	3.0e-32
WP_038599193.1|422076_422778_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.7	9.2e-43
WP_038599196.1|422956_423592_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	62.9	5.2e-61
WP_038599199.1|423724_424585_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	45.5	1.1e-66
WP_038599202.1|424636_425419_+	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_003131570.1|425411_425738_+	DNA replication initiation control protein YabA	NA	NA	NA	NA	NA
WP_038599205.1|425737_426613_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	65.0	2.5e-98
>prophage 3
NZ_CP009472	Lactococcus lactis strain AI06 chromosome, complete genome	2398091	1039685	1090051	2398091	holin,capsid,integrase,head,tail,protease,portal,terminase	Lactococcus_phage(78.0%)	65	1040116:1040133	1098604:1098621
WP_038600356.1|1039685_1041239_-	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	38.6	1.1e-32
1040116:1040133	attL	ATTTTCTTTTTATCAATT	NA	NA	NA	NA
WP_038600359.1|1041228_1041939_-	response regulator transcription factor	NA	A0A1V0SGR9	Hokovirus	29.1	1.6e-05
WP_038600362.1|1042123_1042459_+	putative DNA-binding protein	NA	NA	NA	NA	NA
WP_038600368.1|1043167_1044250_-|integrase	site-specific integrase	integrase	A0A172LN96	Lactococcus_phage	85.0	1.2e-179
WP_038600371.1|1044370_1045183_-	Ltp family lipoprotein	NA	A0A2H4J5B8	uncultured_Caudovirales_phage	73.2	6.5e-08
WP_038600374.1|1045276_1046332_-	type I restriction enzyme HsdR N-terminal domain-containing protein	NA	A0A1S5SAB0	Streptococcus_phage	61.7	8.8e-122
WP_052053843.1|1046594_1047785_-	3'-5' exoribonuclease	NA	A0A0K2SUJ2	Clostridium_phage	39.0	2.2e-28
WP_038600379.1|1047893_1048175_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038600382.1|1048210_1048798_-	hypothetical protein	NA	Q9AZW4	Lactococcus_phage	85.0	2.4e-92
WP_038600386.1|1048808_1049285_-	helix-turn-helix domain-containing protein	NA	Q9AZQ8	Lactococcus_phage	88.1	6.7e-45
WP_038600389.1|1049615_1050110_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017865020.1|1050266_1050470_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017865019.1|1050466_1050721_-	DUF2513 domain-containing protein	NA	NA	NA	NA	NA
WP_038600397.1|1050851_1051094_+	hypothetical protein	NA	Q77JL3	Lactococcus_phage	98.8	8.9e-38
WP_038600400.1|1051105_1051897_+	phage antirepressor KilAC domain-containing protein	NA	Q38330	Lactococcus_phage	77.9	1.2e-107
WP_038600402.1|1051909_1052200_+	hypothetical protein	NA	Q9AZW0	Lactococcus_phage	97.9	1.8e-48
WP_038600404.1|1052398_1052698_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038600407.1|1052748_1052934_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015426821.1|1053034_1053430_+	hypothetical protein	NA	A0A1P8BL23	Lactococcus_phage	99.2	4.2e-69
WP_038600413.1|1053438_1054197_+	hypothetical protein	NA	Q0ILF6	Lactococcus_phage	94.4	3.9e-140
WP_038600416.1|1054189_1054615_+	single-stranded DNA-binding protein	NA	Q9AZV6	Lactococcus_phage	93.6	6.3e-71
WP_038600418.1|1054738_1055557_+	DnaD domain protein	NA	Q9AYU4	Lactococcus_phage	98.5	3.9e-125
WP_038600422.1|1055537_1055768_+	hypothetical protein	NA	Q94M91	Lactococcus_phage	95.9	7.4e-34
WP_038600425.1|1055748_1056123_+	DUF1064 domain-containing protein	NA	A0A1P8BMB7	Lactococcus_phage	98.3	8.3e-59
WP_144242772.1|1056134_1056524_+	hypothetical protein	NA	A0A1P8BKY9	Lactococcus_phage	38.6	7.7e-07
WP_158423272.1|1056575_1056740_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038600430.1|1056786_1057002_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038600432.1|1056985_1057180_+	DUF1660 domain-containing protein	NA	A0A1P8BLJ5	Lactococcus_phage	96.9	1.1e-33
WP_038600435.1|1057231_1057441_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038600438.1|1057767_1058037_-	DUF3892 domain-containing protein	NA	NA	NA	NA	NA
WP_038600440.1|1058155_1058578_+	DUF722 domain-containing protein	NA	A0A182BQA1	Lactococcus_phage	83.6	2.1e-58
WP_038600442.1|1058766_1059360_+	hypothetical protein	NA	D2IYV7	Enterococcus_phage	29.2	3.4e-14
WP_038600444.1|1059546_1060059_+|terminase	terminase small subunit	terminase	A0A059NT97	Lactococcus_phage	94.1	8.4e-78
WP_038600446.1|1060048_1061284_+|terminase	PBSX family phage terminase large subunit	terminase	A0A059NT69	Lactococcus_phage	97.8	2.1e-239
WP_038600448.1|1061293_1062802_+|portal	phage portal protein	portal	A0A059NT52	Lactococcus_phage	94.6	7.1e-250
WP_173402258.1|1062758_1062929_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038600451.1|1062925_1063213_+|protease	ribosomal-processing cysteine protease Prp	protease	A0A182BQ95	Lactococcus_phage	96.8	7.3e-47
WP_038600454.1|1063218_1064325_+|capsid	minor capsid protein	capsid	A0A059NT80	Lactococcus_phage	94.5	7.6e-193
WP_038602801.1|1064489_1065137_+	DUF4355 domain-containing protein	NA	A0A059NT87	Lactococcus_phage	85.0	1.3e-51
WP_038600457.1|1065153_1066191_+	hypothetical protein	NA	D2J006	Enterococcus_phage	84.9	2.0e-166
WP_038600460.1|1066204_1066540_+|head,tail	phage head-tail connector protein	head,tail	A0A059NT99	Lactococcus_phage	93.6	1.2e-51
WP_038600463.1|1066520_1066874_+	hypothetical protein	NA	A0A059NT74	Lactococcus_phage	92.3	1.8e-55
WP_038600467.1|1066857_1067406_+	hypothetical protein	NA	A0A059NT55	Lactococcus_phage	97.3	1.6e-95
WP_038600470.1|1067405_1067768_+	hypothetical protein	NA	A0A182BQ88	Lactococcus_phage	95.8	3.3e-60
WP_038600473.1|1067780_1068212_+|tail	major tail protein	tail	A0A182BQ87	Lactococcus_phage	90.0	3.1e-65
WP_038600476.1|1068284_1068695_+	hypothetical protein	NA	A0A182BQ86	Lactococcus_phage	75.0	3.5e-50
WP_038600479.1|1068718_1069090_+	hypothetical protein	NA	A0A059NT78	Lactococcus_phage	93.1	2.6e-44
WP_038600481.1|1069121_1073804_+|tail	tail protein	tail	A0A059NT57	Lactococcus_phage	89.6	0.0e+00
WP_038600483.1|1073815_1074181_+	hypothetical protein	NA	A0A059NT91	Lactococcus_phage	99.2	2.4e-63
WP_038600488.1|1074192_1076730_+	hypothetical protein	NA	A0A059NT86	Lactococcus_phage	93.5	0.0e+00
WP_011676905.1|1076726_1076864_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017864624.1|1078056_1078281_+	hemolysin XhlA family protein	NA	Q9AZR4	Lactococcus_phage	98.6	1.4e-32
WP_038600491.1|1078294_1078582_+|holin	phage holin	holin	Q9AZL0	Lactococcus_phage	97.9	2.1e-46
WP_038600494.1|1078581_1079361_+	C40 family peptidase	NA	A0A1P8BLX0	Lactococcus_phage	98.1	1.1e-126
WP_038600497.1|1079586_1079991_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	48.8	1.4e-27
WP_038600499.1|1080510_1081194_+	NYN domain-containing protein	NA	A4JWQ6	Burkholderia_virus	41.9	3.5e-39
WP_038602807.1|1082325_1084266_+	hypothetical protein	NA	A0A059NT86	Lactococcus_phage	69.4	2.3e-232
WP_173402259.1|1084262_1084400_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038600502.1|1085289_1085661_+	hypothetical protein	NA	A0A1P8BKU2	Lactococcus_phage	96.4	1.8e-21
WP_017864623.1|1085673_1085961_+|holin	phage holin	holin	A0A1P8BKR5	Lactococcus_phage	97.9	2.8e-46
WP_038600505.1|1085962_1086181_+	hypothetical protein	NA	A0A0K2CZA1	Paenibacillus_phage	56.5	3.4e-12
WP_038600508.1|1086180_1086960_+	C40 family peptidase	NA	Q38323	Lactococcus_phage	94.2	5.1e-119
WP_080739849.1|1087122_1088013_+	C40 family peptidase	NA	A0A0A8WIF2	Clostridium_phage	45.6	7.6e-18
WP_038600511.1|1088174_1089101_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_038600517.1|1089544_1090051_+	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	83.3	5.6e-74
1098604:1098621	attR	ATTTTCTTTTTATCAATT	NA	NA	NA	NA
>prophage 4
NZ_CP009472	Lactococcus lactis strain AI06 chromosome, complete genome	2398091	1449188	1457456	2398091		Staphylococcus_phage(50.0%)	9	NA	NA
WP_038601286.1|1449188_1450145_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	37.8	1.8e-49
WP_052053851.1|1450147_1451770_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003130996.1|1451909_1452353_-	divergent PAP2 family protein	NA	NA	NA	NA	NA
WP_038601288.1|1452498_1453404_-	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	28.2	5.4e-11
WP_012897620.1|1453465_1453918_-	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_038601290.1|1454020_1454485_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	54.4	8.2e-40
WP_038601292.1|1454512_1455709_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	51.8	5.0e-113
WP_038601294.1|1455717_1456368_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	43.9	2.7e-41
WP_038601295.1|1456367_1457456_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	38.5	3.2e-50
>prophage 5
NZ_CP009472	Lactococcus lactis strain AI06 chromosome, complete genome	2398091	1464267	1475003	2398091		Bacillus_virus(33.33%)	9	NA	NA
WP_038601303.1|1464267_1466742_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	32.2	1.6e-97
WP_003130977.1|1467017_1467467_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_038601305.1|1467463_1468297_-	3'-5' exonuclease	NA	A0A0K2SUJ2	Clostridium_phage	40.0	1.1e-21
WP_038602869.1|1468289_1468829_-	cysteine hydrolase family protein	NA	NA	NA	NA	NA
WP_038601307.1|1469033_1470968_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	43.5	1.4e-125
WP_038601309.1|1471244_1471883_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_012897612.1|1472056_1472275_+	redoxin NrdH	NA	C3U2K9	Lactococcus_phage	47.6	7.6e-12
WP_029343796.1|1472276_1472699_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A142F1R4	Bacillus_phage	38.1	1.7e-12
WP_038601312.1|1472834_1475003_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	61.0	1.1e-256
>prophage 6
NZ_CP009472	Lactococcus lactis strain AI06 chromosome, complete genome	2398091	1830807	1840665	2398091	tRNA	Prochlorococcus_phage(33.33%)	9	NA	NA
WP_003130886.1|1830807_1831569_-	phosphate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.0	1.5e-17
WP_003130885.1|1831734_1832544_-	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.5	7.0e-10
WP_003130884.1|1832577_1833471_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_038601722.1|1833470_1834394_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_029344245.1|1834514_1835366_-	phosphate ABC transporter substrate-binding protein	NA	E3SNT9	Prochlorococcus_phage	27.3	4.2e-05
WP_003130880.1|1835712_1836609_-	phosphate ABC transporter substrate-binding protein	NA	E3SM63	Prochlorococcus_phage	32.4	7.2e-08
WP_003130878.1|1836886_1837354_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	56.6	2.7e-43
WP_038601724.1|1837385_1837943_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_038601726.1|1838046_1840665_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	33.3	5.5e-64
