The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP009281	Paenibacillus sp. FSL R5-0345, complete genome	6787172	349299	356389	6787172		Paramecium_bursaria_Chlorella_virus(33.33%)	9	NA	NA
WP_042123526.1|349299_350328_+	agmatine deiminase family protein	NA	A7RCL2	Paramecium_bursaria_Chlorella_virus	38.2	2.1e-67
WP_042123528.1|350381_351257_+	N-carbamoylputrescine amidase	NA	M1GUG4	Paramecium_bursaria_Chlorella_virus	46.9	1.1e-72
WP_042123530.1|351504_352314_+	basic amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_042131777.1|352411_353059_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_042131778.1|353072_353795_+	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.2	6.4e-23
WP_042123532.1|353952_354399_+	tellurite resistance TerB family protein	NA	A0A1Y0T181	Sinorhizobium_phage	28.6	1.5e-06
WP_042123533.1|354525_355122_+	TerD family protein	NA	K4JRX3	Caulobacter_phage	34.2	1.8e-23
WP_042123535.1|355151_355727_+	TerD family protein	NA	NA	NA	NA	NA
WP_042123537.1|355807_356389_+	TerD family protein	NA	K4JRX3	Caulobacter_phage	37.0	2.0e-27
>prophage 2
NZ_CP009281	Paenibacillus sp. FSL R5-0345, complete genome	6787172	693880	704847	6787172		Mollivirus(25.0%)	9	NA	NA
WP_042124027.1|693880_695176_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	27.3	6.7e-23
WP_042124030.1|695426_696317_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	33.4	9.3e-40
WP_036680912.1|696450_696696_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	A0A0E3FJ99	Synechococcus_phage	36.7	3.7e-07
WP_042124034.1|696701_697391_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_042124036.1|697368_699615_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	42.5	3.5e-168
WP_042124038.1|699599_701096_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.1	5.7e-50
WP_042124040.1|701480_702521_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	45.0	3.6e-67
WP_042124042.1|702520_703138_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.9	3.8e-24
WP_042124044.1|703299_704847_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	52.0	2.8e-76
>prophage 3
NZ_CP009281	Paenibacillus sp. FSL R5-0345, complete genome	6787172	1297309	1306933	6787172		Brevibacillus_phage(28.57%)	20	NA	NA
WP_052414484.1|1297309_1297738_-	helix-turn-helix transcriptional regulator	NA	S5MAC0	Brevibacillus_phage	48.0	4.3e-11
WP_042131905.1|1297908_1298124_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_156114727.1|1298967_1299108_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042124814.1|1299100_1299316_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156114728.1|1299377_1299560_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042124818.1|1299606_1299807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156114729.1|1299825_1299990_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042124820.1|1300029_1300905_+	endonuclease	NA	A6XMH8	Bacillus_virus	44.8	1.5e-58
WP_156114908.1|1300913_1301762_+	recombination protein RecT	NA	W8EBF6	Geobacillus_phage	53.6	2.6e-68
WP_052414487.1|1301832_1302255_+	hypothetical protein	NA	A0A0A7RUP7	Clostridium_phage	37.0	6.0e-13
WP_042124821.1|1302459_1302651_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042124823.1|1302647_1302842_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042124825.1|1302855_1303728_+	hypothetical protein	NA	A0A142K976	Gordonia_phage	38.7	3.0e-11
WP_081954010.1|1303675_1304413_+	AAA family ATPase	NA	A0A0K2CPA5	Brevibacillus_phage	56.3	2.2e-63
WP_081954011.1|1304430_1304604_+	sporulation protein Cse60	NA	NA	NA	NA	NA
WP_081954012.1|1304733_1304847_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042124830.1|1304872_1305415_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042124832.1|1305407_1305680_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042124834.1|1305683_1306109_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042124836.1|1306201_1306933_+	site-specific DNA-methyltransferase	NA	W8EBG5	Geobacillus_phage	46.3	4.0e-57
>prophage 4
NZ_CP009281	Paenibacillus sp. FSL R5-0345, complete genome	6787172	2173003	2183160	6787172		Bacillus_phage(66.67%)	9	NA	NA
WP_042125996.1|2173003_2174800_+	HAMP domain-containing protein	NA	W8CYF6	Bacillus_phage	32.3	5.4e-39
WP_042125998.1|2174908_2175637_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.9	6.6e-36
WP_042126000.1|2175836_2176592_+	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	33.0	2.1e-16
WP_042126002.1|2176665_2177325_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_042126004.1|2177561_2180231_+	DNA polymerase I	NA	A0A218MKQ4	uncultured_virus	29.1	3.2e-59
WP_042126006.1|2180283_2181120_+	DNA-formamidopyrimidine glycosylase	NA	A0A127AWE5	Bacillus_phage	30.7	2.6e-20
WP_042126007.1|2181247_2181994_+	membrane protein	NA	NA	NA	NA	NA
WP_042126008.1|2182003_2182600_+	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_042126010.1|2182596_2183160_+	lytic transglycosylase domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	38.3	1.0e-15
>prophage 5
NZ_CP009281	Paenibacillus sp. FSL R5-0345, complete genome	6787172	3495169	3508126	6787172		Bacillus_phage(28.57%)	7	NA	NA
WP_042127927.1|3495169_3501946_+	hypothetical protein	NA	A0A160DDD4	Gordonia_phage	31.6	7.9e-06
WP_042127928.1|3502572_3503253_+	nicotinamide mononucleotide transporter	NA	A0A1S6UAV8	Serratia_phage	35.9	2.1e-31
WP_042127930.1|3503249_3504260_+	AAA family ATPase	NA	A0A1C9LW10	Vibrio_phage	30.3	9.6e-25
WP_042127932.1|3504286_3505174_+	NUDIX hydrolase	NA	G3MA14	Bacillus_virus	35.3	2.5e-37
WP_042127934.1|3505176_3505728_+	NADAR family protein	NA	A0A2D2W261	Stenotrophomonas_phage	49.7	5.9e-37
WP_042127936.1|3506444_3507122_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.1	5.8e-26
WP_042127938.1|3507118_3508126_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	23.7	1.1e-09
>prophage 6
NZ_CP009281	Paenibacillus sp. FSL R5-0345, complete genome	6787172	3637901	3644549	6787172		Pneumococcus_phage(33.33%)	9	NA	NA
WP_042128158.1|3637901_3638660_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	47.8	3.3e-62
WP_042128160.1|3638616_3639099_-	6-carboxytetrahydropterin synthase	NA	E7DN67	Pneumococcus_phage	49.3	9.2e-26
WP_042128162.1|3639098_3639761_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	51.8	8.4e-62
WP_076106775.1|3639790_3640291_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	68.6	2.9e-51
WP_156114814.1|3640546_3641233_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042128164.1|3641229_3642078_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	38.0	1.2e-33
WP_042128166.1|3642288_3642624_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042128167.1|3642684_3643596_-	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA	NA
WP_042128168.1|3643748_3644549_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.0	6.0e-14
>prophage 7
NZ_CP009281	Paenibacillus sp. FSL R5-0345, complete genome	6787172	4598653	4609842	6787172		Staphylococcus_phage(50.0%)	12	NA	NA
WP_042129643.1|4598653_4599853_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	29.8	1.9e-27
WP_042129645.1|4600019_4600526_-	sporulation protein YtfJ	NA	NA	NA	NA	NA
WP_042129646.1|4600610_4601324_-	DUF2953 domain-containing protein	NA	NA	NA	NA	NA
WP_042129648.1|4601507_4602110_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	31.3	4.5e-14
WP_042129650.1|4602078_4602870_-	segregation and condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	36.8	4.9e-08
WP_036676377.1|4603004_4603472_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	58.0	1.6e-43
WP_042129652.1|4603508_4604762_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	53.2	2.3e-116
WP_042129654.1|4604824_4605493_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	41.5	1.0e-35
WP_042129657.1|4605571_4606672_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	36.4	3.9e-56
WP_042129658.1|4607294_4607699_-	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_042129660.1|4607873_4609058_+	acyltransferase	NA	NA	NA	NA	NA
WP_042129662.1|4609131_4609842_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	38.7	6.7e-41
>prophage 8
NZ_CP009281	Paenibacillus sp. FSL R5-0345, complete genome	6787172	6069828	6086331	6787172	plate,portal,tail	Clostridium_phage(35.29%)	24	NA	NA
WP_042131182.1|6069828_6070521_-	hypothetical protein	NA	A0A127AWA8	Bacillus_phage	49.4	4.1e-43
WP_042131183.1|6070492_6070882_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042131184.1|6070874_6071075_-	hypothetical protein	NA	NA	NA	NA	NA
WP_036681272.1|6071077_6071359_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042131185.1|6071453_6071669_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042131186.1|6071692_6072136_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042131187.1|6072149_6073640_-	hypothetical protein	NA	S6B1J7	Thermus_phage	35.1	6.4e-09
WP_042131188.1|6073651_6074263_-	YmfQ family protein	NA	S6BFJ0	Thermus_phage	54.3	2.3e-53
WP_081954205.1|6074266_6074602_-	hypothetical protein	NA	A0A0A7S181	Clostridium_phage	65.7	5.6e-06
WP_042131189.1|6074613_6075636_-	DUF2793 domain-containing protein	NA	A0A0S0MV96	Pseudomonas_phage	36.8	3.8e-13
WP_042131191.1|6075637_6076051_-	hypothetical protein	NA	A0A0A7S1G0	Clostridium_phage	52.8	2.4e-30
WP_042131192.1|6076052_6077111_-|plate	baseplate J/gp47 family protein	plate	S6AVU3	Thermus_phage	54.8	1.4e-98
WP_042131193.1|6077103_6077535_-	DUF2634 domain-containing protein	NA	A0A0A8WJV8	Clostridium_phage	35.3	7.7e-16
WP_042132514.1|6077531_6077828_-	DUF2577 domain-containing protein	NA	A0A0A7RTJ2	Clostridium_phage	40.4	3.1e-16
WP_042131194.1|6077833_6078796_-	hypothetical protein	NA	A0A0K2CNH3	Brevibacillus_phage	48.4	4.4e-88
WP_042131195.1|6078805_6079558_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0K2CNM3	Brevibacillus_phage	41.0	6.2e-45
WP_042131196.1|6079559_6081584_-	hypothetical protein	NA	A0A0K2CP22	Brevibacillus_phage	30.6	2.4e-19
WP_042131197.1|6081774_6082197_-|portal	phage portal protein	portal	A0A0A8WJT4	Clostridium_phage	42.5	9.8e-24
WP_042131198.1|6082310_6082781_-|tail	phage tail tube protein	tail	A0A0K2CNG3	Brevibacillus_phage	61.6	4.4e-49
WP_042131199.1|6082782_6084105_-	phage-like element PBSX protein XkdK	NA	A0A0A7RTT5	Clostridium_phage	47.4	7.7e-107
WP_042131201.1|6084104_6084284_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156114880.1|6084280_6084697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139328617.1|6085121_6085619_-	transcriptional regulator	NA	A0A0C5AJ96	Bacteriophage	64.9	2.1e-41
WP_042131203.1|6085902_6086331_+	transcriptional regulator	NA	S6C481	Thermus_phage	45.5	1.2e-21
