assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000758345.1_ASM75834v1	NZ_CP009460	Dickeya fangzhongdai strain ND14b chromosome, complete genome	1	2353466-2354287	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DinG,cas3,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,cas3f,cas8f,cas5f,cas7f,cas6f	Type I-E	CGGTTTATCCCCGCTCTCGCGGGGAACAC,CGGTTTATCCCCGCTNNCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	13,13,12	13	TypeI-E	DinG,cas3,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,cas3f,cas8f,cas5f,cas7f,cas6f	NA,NA	NA|250aa|up_9|NZ_CP009460.1_2340862_2341612_+	cd03765, proteasome_beta_bacterial, Bacterial proteasome, beta subunit	NA|532aa|up_8|NZ_CP009460.1_2341690_2343286_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|274aa|up_7|NZ_CP009460.1_2343278_2344100_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|333aa|up_6|NZ_CP009460.1_2344127_2345126_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|514aa|up_5|NZ_CP009460.1_2345142_2346684_-	cd08503, PBP2_NikA_DppA_OppA_like_17, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|303aa|up_4|NZ_CP009460.1_2346816_2347725_-	pfam02574, S-methyl_trans, Homocysteine S-methyltransferase	NA|713aa|up_3|NZ_CP009460.1_2348103_2350242_+	PRK09263, PRK09263, anaerobic ribonucleoside triphosphate reductase; Provisional	NA|155aa|up_2|NZ_CP009460.1_2350340_2350805_+	PRK11121, nrdG, anaerobic ribonucleoside-triphosphate reductase-activating protein	NA|151aa|up_1|NZ_CP009460.1_2350911_2351364_-	PRK03467, PRK03467, hypothetical protein; Provisional	NA|559aa|up_0|NZ_CP009460.1_2351726_2353403_+	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional	cas2|98aa|down_0|NZ_CP009460.1_2354371_2354665_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|308aa|down_1|NZ_CP009460.1_2354661_2355585_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|216aa|down_2|NZ_CP009460.1_2355598_2356246_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|245aa|down_3|NZ_CP009460.1_2356245_2356980_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|354aa|down_4|NZ_CP009460.1_2356987_2358049_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|222aa|down_5|NZ_CP009460.1_2358045_2358711_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|512aa|down_6|NZ_CP009460.1_2358703_2360239_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|915aa|down_7|NZ_CP009460.1_2360860_2363605_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|120aa|down_8|NZ_CP009460.1_2364252_2364612_+	COG4226, HicB, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|308aa|down_9|NZ_CP009460.1_2364765_2365689_+	PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional
GCF_000758345.1_ASM75834v1	NZ_CP009460	Dickeya fangzhongdai strain ND14b chromosome, complete genome	2	2888323-2888463	2	CRISPRCasFinder	no	cas3	DinG,cas3,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,cas3f,cas8f,cas5f,cas7f,cas6f	Unclear	ACAGCGGATATACTCCTGCAACGTTTATAACAGTACTGTATC	42	0	0	NA	NA	NA	1	1	Unclear	DinG,cas3,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,cas3f,cas8f,cas5f,cas7f,cas6f	NA,NA|41aa|down_3|NZ_CP009460.1_2893610_2893733_-	NA|502aa|up_9|NZ_CP009460.1_2872527_2874033_+	PRK10762, PRK10762, D-ribose transporter ATP binding protein; Provisional	NA|323aa|up_8|NZ_CP009460.1_2874040_2875009_+	PRK09512, rbsC, ribose ABC transporter permease protein; Reviewed	NA|297aa|up_7|NZ_CP009460.1_2875035_2875926_+	PRK10653, PRK10653, ribose ABC transporter substrate-binding protein RbsB	NA|309aa|up_6|NZ_CP009460.1_2876008_2876935_+	PRK11142, PRK11142, ribokinase; Provisional	NA|332aa|up_5|NZ_CP009460.1_2876947_2877943_+	PRK10423, PRK10423, transcriptional repressor RbsR; Provisional	NA|176aa|up_4|NZ_CP009460.1_2883576_2884104_-	PRK10751, PRK10751, molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional	NA|192aa|up_3|NZ_CP009460.1_2884096_2884672_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|90aa|up_2|NZ_CP009460.1_2884782_2885052_+	pfam06288, DUF1040, Protein of unknown function (DUF1040)	NA|329aa|up_1|NZ_CP009460.1_2885093_2886080_+	PRK11768, PRK11768, serine/threonine protein kinase	NA|208aa|up_0|NZ_CP009460.1_2886102_2886726_+	PRK10954, PRK10954, thiol:disulfide interchange protein DsbA	NA|223aa|down_0|NZ_CP009460.1_2890578_2891247_-	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|178aa|down_1|NZ_CP009460.1_2891447_2891981_+	PRK05244, PRK05244, Der GTPase-activating protein YihI	NA|458aa|down_2|NZ_CP009460.1_2892162_2893536_+	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|41aa|down_3|NZ_CP009460.1_2893610_2893733_-	NA	NA|471aa|down_4|NZ_CP009460.1_2894003_2895416_-	PRK10923, glnG, nitrogen regulation protein NR(I); Provisional	NA|350aa|down_5|NZ_CP009460.1_2895424_2896474_-	PRK11073, glnL, nitrogen regulation protein NR(II)	NA|470aa|down_6|NZ_CP009460.1_2896678_2898088_-	PRK09469, glnA, glutamate--ammonia ligase	NA|608aa|down_7|NZ_CP009460.1_2898463_2900287_+	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms]	NA|204aa|down_8|NZ_CP009460.1_2900634_2901246_+	PRK09456, PRK09456, ?-D-glucose-1-phosphatase; Provisional	NA|146aa|down_9|NZ_CP009460.1_2901253_2901691_+	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional
GCF_000758345.1_ASM75834v1	NZ_CP009460	Dickeya fangzhongdai strain ND14b chromosome, complete genome	3	3726600-3728067	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	DinG,cas3,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,cas3f,cas8f,cas5f,cas7f,cas6f	Type I-F	TTTCTAAGCTGCCTACTCGGCAGTGAAC,TTTCTAAGCTGCCTACTCGGCAGTGAAC,TTTCTAAGCTGCCTACTCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	24,24,23	24	TypeI-F	DinG,cas3,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,cas3f,cas8f,cas5f,cas7f,cas6f	NA|170aa|up_8|NZ_CP009460.1_3714043_3714553_+,NA	NA|196aa|up_9|NZ_CP009460.1_3713071_3713659_-	pfam14065, DUF4255, Protein of unknown function (DUF4255)	NA|170aa|up_8|NZ_CP009460.1_3714043_3714553_+	NA	NA|210aa|up_7|NZ_CP009460.1_3714954_3715584_+	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs	NA|193aa|up_6|NZ_CP009460.1_3715618_3716197_+	smart00903, Flavin_Reduct, Flavin reductase like domain	NA|182aa|up_5|NZ_CP009460.1_3716253_3716799_-	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional	NA|944aa|up_4|NZ_CP009460.1_3717042_3719874_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|140aa|up_3|NZ_CP009460.1_3719964_3720384_+	pfam01894, UPF0047, Uncharacterized protein family UPF0047	NA|404aa|up_2|NZ_CP009460.1_3720388_3721600_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|537aa|up_1|NZ_CP009460.1_3721988_3723599_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|567aa|up_0|NZ_CP009460.1_3724568_3726269_+	PRK15041, PRK15041, methyl-accepting chemotaxis protein	cas1|327aa|down_0|NZ_CP009460.1_3728364_3729345_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3f|1100aa|down_1|NZ_CP009460.1_3729341_3732641_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|446aa|down_2|NZ_CP009460.1_3732994_3734332_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|313aa|down_3|NZ_CP009460.1_3734328_3735267_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|336aa|down_4|NZ_CP009460.1_3735283_3736291_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|185aa|down_5|NZ_CP009460.1_3736297_3736852_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|398aa|down_6|NZ_CP009460.1_3738255_3739449_-	PRK09257, PRK09257, aromatic amino acid transaminase	NA|205aa|down_7|NZ_CP009460.1_3739490_3740105_-	COG1284, COG1284, Uncharacterized conserved protein [Function unknown]	NA|159aa|down_8|NZ_CP009460.1_3740356_3740833_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|458aa|down_9|NZ_CP009460.1_3741215_3742589_+	PRK10238, PRK10238, aromatic amino acid transporter AroP
GCF_000758345.1_ASM75834v1	NZ_CP009460	Dickeya fangzhongdai strain ND14b chromosome, complete genome	4	3736982-3737850	4,3	CRISPRCasFinder,CRT	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	DinG,cas3,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,cas3f,cas8f,cas5f,cas7f,cas6f	Type I-F	GTTCACTGCCGTGTAGGCAGCTTAGAAA,GTTCACTGCCGTGTAGGCAGCTTAGAAA	28,28	1	1	3737610-3737642	NZ_CP009460.1_1082547-1082579	I-F:I-F	14,14	14	TypeI-F	DinG,cas3,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,cas3f,cas8f,cas5f,cas7f,cas6f	NA,NA	NA|140aa|up_9|NZ_CP009460.1_3719964_3720384_+	pfam01894, UPF0047, Uncharacterized protein family UPF0047	NA|404aa|up_8|NZ_CP009460.1_3720388_3721600_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|537aa|up_7|NZ_CP009460.1_3721988_3723599_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|567aa|up_6|NZ_CP009460.1_3724568_3726269_+	PRK15041, PRK15041, methyl-accepting chemotaxis protein	cas1|327aa|up_5|NZ_CP009460.1_3728364_3729345_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3f|1100aa|up_4|NZ_CP009460.1_3729341_3732641_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|446aa|up_3|NZ_CP009460.1_3732994_3734332_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|313aa|up_2|NZ_CP009460.1_3734328_3735267_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|336aa|up_1|NZ_CP009460.1_3735283_3736291_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|185aa|up_0|NZ_CP009460.1_3736297_3736852_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|398aa|down_0|NZ_CP009460.1_3738255_3739449_-	PRK09257, PRK09257, aromatic amino acid transaminase	NA|205aa|down_1|NZ_CP009460.1_3739490_3740105_-	COG1284, COG1284, Uncharacterized conserved protein [Function unknown]	NA|159aa|down_2|NZ_CP009460.1_3740356_3740833_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|458aa|down_3|NZ_CP009460.1_3741215_3742589_+	PRK10238, PRK10238, aromatic amino acid transporter AroP	NA|256aa|down_4|NZ_CP009460.1_3743333_3744101_+	cd01069, PBP2_PheC, Cyclohexadienyl dehydratase, a member of the type 2 periplasmic binding fold protein superfamily	NA|83aa|down_5|NZ_CP009460.1_3744344_3744593_+	pfam07338, DUF1471, Protein of unknown function (DUF1471)	NA|359aa|down_6|NZ_CP009460.1_3744737_3745814_-	cd06827, PLPDE_III_AR_proteobact, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases	NA|468aa|down_7|NZ_CP009460.1_3745920_3747324_-	PRK08006, PRK08006, replicative DNA helicase DnaB	NA|334aa|down_8|NZ_CP009460.1_3747445_3748447_+	PRK10754, PRK10754, NADPH:quinone reductase	NA|469aa|down_9|NZ_CP009460.1_3748834_3750241_+	pfam00067, p450, Cytochrome P450
GCF_000758345.1_ASM75834v1	NZ_CP009460	Dickeya fangzhongdai strain ND14b chromosome, complete genome	5	3742626-3743129	4,3,5	CRT,PILER-CR,CRISPRCasFinder	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	DinG,cas3,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,cas3f,cas8f,cas5f,cas7f,cas6f	Type I-F	TTTCTAAGCTGCCTACACGGCAGTGAAC,TTTCTAAGCTGCCTACACGGCAGTGAAC,TTTCTAAGCTGCCTACACGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	8,7,7	8	TypeI-F	DinG,cas3,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,cas3f,cas8f,cas5f,cas7f,cas6f	NA,NA	cas1|327aa|up_9|NZ_CP009460.1_3728364_3729345_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3f|1100aa|up_8|NZ_CP009460.1_3729341_3732641_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|446aa|up_7|NZ_CP009460.1_3732994_3734332_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|313aa|up_6|NZ_CP009460.1_3734328_3735267_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|336aa|up_5|NZ_CP009460.1_3735283_3736291_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|185aa|up_4|NZ_CP009460.1_3736297_3736852_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|398aa|up_3|NZ_CP009460.1_3738255_3739449_-	PRK09257, PRK09257, aromatic amino acid transaminase	NA|205aa|up_2|NZ_CP009460.1_3739490_3740105_-	COG1284, COG1284, Uncharacterized conserved protein [Function unknown]	NA|159aa|up_1|NZ_CP009460.1_3740356_3740833_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|458aa|up_0|NZ_CP009460.1_3741215_3742589_+	PRK10238, PRK10238, aromatic amino acid transporter AroP	NA|256aa|down_0|NZ_CP009460.1_3743333_3744101_+	cd01069, PBP2_PheC, Cyclohexadienyl dehydratase, a member of the type 2 periplasmic binding fold protein superfamily	NA|83aa|down_1|NZ_CP009460.1_3744344_3744593_+	pfam07338, DUF1471, Protein of unknown function (DUF1471)	NA|359aa|down_2|NZ_CP009460.1_3744737_3745814_-	cd06827, PLPDE_III_AR_proteobact, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases	NA|468aa|down_3|NZ_CP009460.1_3745920_3747324_-	PRK08006, PRK08006, replicative DNA helicase DnaB	NA|334aa|down_4|NZ_CP009460.1_3747445_3748447_+	PRK10754, PRK10754, NADPH:quinone reductase	NA|469aa|down_5|NZ_CP009460.1_3748834_3750241_+	pfam00067, p450, Cytochrome P450	NA|92aa|down_6|NZ_CP009460.1_3750668_3750944_-	PRK09459, pspG, envelope stress response protein PspG	NA|327aa|down_7|NZ_CP009460.1_3751119_3752100_-	PRK11815, PRK11815, tRNA dihydrouridine(20/20a) synthase DusA	NA|151aa|down_8|NZ_CP009460.1_3752281_3752734_+	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family	NA|154aa|down_9|NZ_CP009460.1_3752730_3753192_+	pfam08808, RES, RES domain
