The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP009458	Cedecea neteri strain M006, complete genome	4965436	17291	36809	4965436	tail,lysis	uncultured_Caudovirales_phage(29.17%)	29	NA	NA
WP_039286687.1|17291_17849_-	recombinase family protein	NA	A0A0F7LA37	Escherichia_phage	84.7	2.0e-85
WP_039286690.1|18233_18674_+|tail	tail assembly chaperone	tail	A0A0F7LDZ0	Escherichia_phage	52.8	2.1e-40
WP_039286695.1|18645_19245_-|tail	tail fiber assembly protein	tail	A0A218M4J2	Erwinia_phage	53.8	2.7e-59
WP_039286697.1|19244_20066_-|tail	tail fiber protein	tail	K7P7Q7	Enterobacteria_phage	49.1	1.4e-34
WP_039286700.1|20065_20746_-	DUF2612 domain-containing protein	NA	A0A2H4J1A9	uncultured_Caudovirales_phage	75.2	1.3e-97
WP_039286703.1|20742_21942_-	bacteriophage protein	NA	A0A0M4RD32	Salmonella_phage	70.7	1.7e-153
WP_039286706.1|21942_22293_-	hypothetical protein	NA	A0A2H4J629	uncultured_Caudovirales_phage	57.3	3.4e-30
WP_039286709.1|22289_22973_-	translation initiation factor IF-2	NA	A0A0M5M1K7	Salmonella_phage	55.0	7.3e-61
WP_039286712.1|23017_24019_-	hypothetical protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	41.0	5.0e-74
WP_039286715.1|24029_24338_-	hypothetical protein	NA	A0A0M4R5B7	Salmonella_phage	54.0	3.2e-24
WP_039286721.1|24347_24926_-	hypothetical protein	NA	A0A0M3ULD5	Salmonella_phage	45.5	1.4e-33
WP_039286724.1|24925_26257_-	hypothetical protein	NA	A0A0M4REK7	Salmonella_phage	33.6	1.1e-44
WP_052050079.1|26318_26507_-	hypothetical protein	NA	A0A2H4J1A2	uncultured_Caudovirales_phage	46.0	1.4e-06
WP_039286727.1|26506_26920_-	hypothetical protein	NA	A0A2H4J2V6	uncultured_Caudovirales_phage	58.9	1.4e-38
WP_039286728.1|26923_27364_-	DUF3277 family protein	NA	A0A0M5M1K6	Salmonella_phage	64.4	3.3e-46
WP_039286729.1|27374_28514_-	DUF3383 domain-containing protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	61.8	8.0e-129
WP_039286732.1|28517_29057_-	hypothetical protein	NA	A0A2H4J1A0	uncultured_Caudovirales_phage	42.5	1.3e-36
WP_039296242.1|29102_29981_-	triacylglycerol lipase	NA	NA	NA	NA	NA
WP_039286737.1|30031_30484_-|lysis	lysis protein	lysis	M1FJ79	Enterobacteria_phage	46.6	5.2e-23
WP_039286739.1|30480_30972_-	lysozyme	NA	A0A1R3Y5W5	Salmonella_virus	50.0	1.8e-40
WP_008459490.1|30971_31271_-	hypothetical protein	NA	O64361	Escherichia_phage	46.9	2.0e-18
WP_039286747.1|31328_31664_-	antitermination protein	NA	Q716D8	Shigella_phage	49.1	1.6e-16
WP_039286750.1|32028_32775_-	helix-turn-helix transcriptional regulator	NA	A0A2I6PIE7	Escherichia_phage	45.9	1.9e-46
WP_039286753.1|33036_33297_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	50.0	3.2e-17
WP_008459499.1|33293_33674_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_039286756.1|33673_34405_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_039286760.1|34479_35217_-	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_039286765.1|35223_36132_-	GTPase Era	NA	NA	NA	NA	NA
WP_008459505.1|36128_36809_-	ribonuclease III	NA	A0A0P0YM82	Yellowstone_lake_phycodnavirus	29.7	4.3e-21
>prophage 2
NZ_CP009458	Cedecea neteri strain M006, complete genome	4965436	2649178	2658554	4965436	tRNA,protease	Dickeya_phage(16.67%)	8	NA	NA
WP_039291472.1|2649178_2650294_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	39.8	1.4e-08
WP_039291473.1|2650290_2652237_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.5	2.5e-37
WP_008461102.1|2652314_2652536_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.7	3.6e-17
WP_008461103.1|2652859_2653180_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	47.2	2.4e-14
WP_039291474.1|2653207_2655481_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.5	2.5e-166
WP_002211347.1|2655579_2655798_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_039291475.1|2656083_2656779_-|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_039291476.1|2656832_2658554_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	F2Y2R6	Organic_Lake_phycodnavirus	27.1	1.9e-17
>prophage 3
NZ_CP009458	Cedecea neteri strain M006, complete genome	4965436	3341674	3399835	4965436	plate,tail,lysis,portal,terminase	Enterobacteria_phage(23.53%)	54	NA	NA
WP_039292994.1|3341674_3343015_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_039292998.1|3343011_3343701_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_039293001.1|3343697_3345410_+	OmpA family protein	NA	NA	NA	NA	NA
WP_039293006.1|3345413_3345905_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_039293008.1|3346084_3348739_+	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	33.7	4.5e-98
WP_039293010.1|3348735_3351228_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	32.9	5.6e-18
WP_039293013.1|3351479_3353402_+	DUF3274 domain-containing protein	NA	A0A077K801	Ralstonia_phage	31.8	7.1e-61
WP_039293016.1|3353402_3353666_+	PAAR domain-containing protein	NA	A4PE23	Ralstonia_virus	33.8	6.3e-05
WP_039293018.1|3353665_3355096_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039293021.1|3355101_3358473_+	type VI secretion protein VasK	NA	NA	NA	NA	NA
WP_039293025.1|3358465_3360955_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	33.3	1.9e-18
WP_039293029.1|3360969_3361710_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039293032.1|3361723_3363664_+	hypothetical protein	NA	A0A077K801	Ralstonia_phage	29.8	1.2e-55
WP_071842781.1|3363708_3363972_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_039293034.1|3364072_3365674_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_039296749.1|3365733_3367488_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_039293038.1|3367451_3368537_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_039293042.1|3368514_3369057_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_039293045.1|3369059_3369515_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_039293048.1|3369559_3370789_+	membrane protein	NA	NA	NA	NA	NA
WP_039293050.1|3370936_3372631_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_039293053.1|3372756_3373035_+	DUF2132 domain-containing protein	NA	NA	NA	NA	NA
WP_081946176.1|3373448_3373883_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_039293055.1|3373969_3374764_+	YdcF family protein	NA	NA	NA	NA	NA
WP_039293057.1|3374908_3375445_+	cytochrome b561	NA	A0A0U2QLA7	Escherichia_phage	44.9	6.4e-20
WP_039293061.1|3375455_3376352_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_039296753.1|3376476_3377364_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_039293064.1|3377405_3379673_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_156108046.1|3379763_3381872_-	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA	NA
WP_039293066.1|3381953_3382742_-	energy transducer TonB	NA	NA	NA	NA	NA
WP_039293070.1|3382748_3383621_-	iron-regulated protein	NA	NA	NA	NA	NA
WP_039293072.1|3383830_3384628_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_081946107.1|3384787_3385690_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_039296757.1|3385760_3386300_+	dihydrofolate reductase	NA	NA	NA	NA	NA
WP_039293078.1|3386308_3386560_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039293081.1|3386833_3388207_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_039293084.1|3388284_3388674_-	DUF2946 domain-containing protein	NA	NA	NA	NA	NA
WP_052050264.1|3389224_3389710_+	hypothetical protein	NA	H9C175	Pectobacterium_phage	47.1	1.9e-34
WP_052050267.1|3389838_3390054_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039293090.1|3391290_3391599_+	hypothetical protein	NA	O64361	Escherichia_phage	43.8	1.1e-13
WP_039293093.1|3391595_3392075_+	lysozyme	NA	A0A1R3Y5W5	Salmonella_virus	52.1	1.1e-42
WP_039293096.1|3392071_3392512_+|lysis	lysis protein	lysis	M9NYX9	Enterobacteria_phage	54.9	1.5e-35
WP_039293100.1|3392550_3393078_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039293102.1|3393170_3393407_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039293105.1|3393454_3393637_-	DUF2158 domain-containing protein	NA	M1F284	Cronobacter_phage	44.9	4.4e-05
WP_156108047.1|3393660_3393903_+	hypothetical protein	NA	I6PDJ6	Cronobacter_phage	64.7	3.3e-16
WP_052050270.1|3393990_3394371_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156108048.1|3394565_3394775_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039293107.1|3395071_3395251_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039293110.1|3395641_3396217_+|terminase	terminase small subunit	terminase	A0A0K2FIG2	Enterobacteria_phage	65.6	2.3e-63
WP_071842735.1|3397671_3397860_+|tail	phage tail protein	tail	E4WL20	Enterobacteria_phage	58.3	3.8e-12
WP_081946109.1|3397856_3398330_+|portal	phage portal protein	portal	E4WL21	Enterobacteria_phage	75.9	6.0e-46
WP_008459160.1|3398412_3398688_+	metal/formaldehyde-sensitive transcriptional repressor	NA	NA	NA	NA	NA
WP_039293112.1|3398716_3399835_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	29.6	6.2e-33
>prophage 4
NZ_CP009458	Cedecea neteri strain M006, complete genome	4965436	4344556	4351061	4965436		Enterobacteria_phage(33.33%)	7	NA	NA
WP_039297024.1|4344556_4345117_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	57.3	3.2e-54
WP_039295143.1|4345132_4345996_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	67.4	1.1e-109
WP_039295146.1|4345995_4347081_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.6	2.6e-100
WP_039297026.1|4347128_4347716_-	acyltransferase	NA	NA	NA	NA	NA
WP_039295149.1|4347705_4348224_-	acyltransferase	NA	A0A1V0SJ47	Klosneuvirus	31.1	3.0e-06
WP_039295152.1|4348562_4349462_-	UTP--glucose-1-phosphate uridylyltransferase GalF	NA	A0A127AW70	Bacillus_phage	41.1	2.2e-49
WP_039295156.1|4349636_4351061_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	29.0	1.7e-19
>prophage 5
NZ_CP009458	Cedecea neteri strain M006, complete genome	4965436	4955312	4963793	4965436	tail	Salmonella_phage(41.67%)	13	NA	NA
WP_039286687.1|4955312_4955870_-	recombinase family protein	NA	A0A0F7LA37	Escherichia_phage	84.7	2.0e-85
WP_071842762.1|4955899_4956415_+|tail	tail fiber protein	tail	A0A0F7LCR3	Escherichia_phage	48.6	4.2e-37
WP_039286695.1|4956414_4957014_+|tail	tail fiber assembly protein	tail	A0A218M4J2	Erwinia_phage	53.8	2.7e-59
WP_039286690.1|4956985_4957426_-|tail	tail assembly chaperone	tail	A0A0F7LDZ0	Escherichia_phage	52.8	2.1e-40
WP_039296225.1|4957427_4958087_-	hypothetical protein	NA	A0A0M3ULD8	Salmonella_phage	71.1	1.2e-28
WP_039286700.1|4958086_4958767_-	DUF2612 domain-containing protein	NA	A0A2H4J1A9	uncultured_Caudovirales_phage	75.2	1.3e-97
WP_039286703.1|4958763_4959963_-	bacteriophage protein	NA	A0A0M4RD32	Salmonella_phage	70.7	1.7e-153
WP_039286706.1|4959963_4960314_-	hypothetical protein	NA	A0A2H4J629	uncultured_Caudovirales_phage	57.3	3.4e-30
WP_039286709.1|4960310_4960994_-	translation initiation factor IF-2	NA	A0A0M5M1K7	Salmonella_phage	55.0	7.3e-61
WP_039286715.1|4962049_4962358_-	hypothetical protein	NA	A0A0M4R5B7	Salmonella_phage	54.0	3.2e-24
WP_052050430.1|4962323_4962947_-	hypothetical protein	NA	A0A0M3ULD5	Salmonella_phage	45.5	1.2e-33
WP_156108078.1|4962946_4963537_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039296232.1|4963502_4963793_-	hypothetical protein	NA	A0A0P0IE11	Acinetobacter_phage	43.0	2.2e-11
