assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000756545.1_ASM75654v1	NZ_CP009427	Mycobacterium tuberculosis strain 96121 chromosome, complete genome	1	365641-366339	1	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	33	2	2	365929-365970|366004-366036	NZ_CP009427.1_373945-373986|NZ_CP009427.1_372760-372792	NA	10	10	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|101aa|up_4|NZ_CP009427.1_362653_362956_+,NA|161aa|down_1|NZ_CP009427.1_375734_376217_-,NA|410aa|down_5|NZ_CP009427.1_378333_379563_+	NA|262aa|up_9|NZ_CP009427.1_358152_358938_+	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|268aa|up_8|NZ_CP009427.1_358926_359730_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|up_7|NZ_CP009427.1_359739_361137_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|324aa|up_6|NZ_CP009427.1_361315_362287_+	pfam00934, PE, PE family	NA|76aa|up_5|NZ_CP009427.1_362429_362657_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|101aa|up_4|NZ_CP009427.1_362653_362956_+	NA	NA|74aa|up_3|NZ_CP009427.1_363003_363225_+	PHA01748, PHA01748, hypothetical protein	NA|142aa|up_2|NZ_CP009427.1_363221_363647_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|211aa|up_1|NZ_CP009427.1_363782_364415_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|303aa|up_0|NZ_CP009427.1_364411_365320_+	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|224aa|down_0|NZ_CP009427.1_375075_375747_+	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|161aa|down_1|NZ_CP009427.1_375734_376217_-	NA	NA|239aa|down_2|NZ_CP009427.1_376274_376991_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|219aa|down_3|NZ_CP009427.1_377092_377749_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NZ_CP009427.1_377818_378310_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|410aa|down_5|NZ_CP009427.1_378333_379563_+	NA	NA|621aa|down_6|NZ_CP009427.1_379717_381580_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|129aa|down_7|NZ_CP009427.1_381651_382038_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|221aa|down_8|NZ_CP009427.1_382040_382703_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|295aa|down_9|NZ_CP009427.1_382763_383648_+	COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
GCF_000756545.1_ASM75654v1	NZ_CP009427	Mycobacterium tuberculosis strain 96121 chromosome, complete genome	2	579553-579670	2	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GATGACCTGCGCCGACGACGATGCAGAGCGTAGCGATGAGG	41	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|110aa|down_2|NZ_CP009427.1_582249_582579_-,NA|330aa|down_3|NZ_CP009427.1_582575_583565_-,NA|297aa|down_5|NZ_CP009427.1_584298_585189_-,NA|311aa|down_7|NZ_CP009427.1_586251_587184_+	NA|281aa|up_9|NZ_CP009427.1_567995_568838_-	cd07581, nitrilase_3, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases)	NA|175aa|up_8|NZ_CP009427.1_568963_569488_-	pfam10698, DUF2505, Protein of unknown function (DUF2505)	NA|370aa|up_7|NZ_CP009427.1_569514_570624_+	PRK13903, murB, UDP-N-acetylmuramate dehydrogenase	NA|452aa|up_6|NZ_CP009427.1_570685_572041_+	pfam17964, Big_10, Bacterial Ig domain	NA|252aa|up_5|NZ_CP009427.1_572021_572777_-	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]	NA|439aa|up_4|NZ_CP009427.1_572959_574276_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|481aa|up_3|NZ_CP009427.1_574323_575766_+	TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase	NA|184aa|up_2|NZ_CP009427.1_575762_576314_+	pfam10722, YbjN, Putative bacterial sensory transduction regulator	NA|202aa|up_1|NZ_CP009427.1_576639_577245_+	TIGR00948, Hypothetical_protein_Rv0488/MT0507/Mb0498	NA|250aa|up_0|NZ_CP009427.1_577401_578151_+	PRK14120, gpmA, phosphoglyceromutase; Provisional	NA|228aa|down_0|NZ_CP009427.1_579683_580367_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|630aa|down_1|NZ_CP009427.1_580363_582253_-	pfam00732, GMC_oxred_N, GMC oxidoreductase	NA|110aa|down_2|NZ_CP009427.1_582249_582579_-	NA	NA|330aa|down_3|NZ_CP009427.1_582575_583565_-	NA	NA|243aa|down_4|NZ_CP009427.1_583569_584298_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|297aa|down_5|NZ_CP009427.1_584298_585189_-	NA	NA|329aa|down_6|NZ_CP009427.1_585268_586255_+	pfam02541, Ppx-GppA, Ppx/GppA phosphatase family	NA|311aa|down_7|NZ_CP009427.1_586251_587184_+	NA	NA|281aa|down_8|NZ_CP009427.1_587199_588042_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|292aa|down_9|NZ_CP009427.1_588057_588933_+	pfam13622, 4HBT_3, Thioesterase-like superfamily
GCF_000756545.1_ASM75654v1	NZ_CP009427	Mycobacterium tuberculosis strain 96121 chromosome, complete genome	3	689921-689997	3	CRISPRCasFinder	no	c2c9_V-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type V-U4	TGAGGTGCGGCGTGAGCGCGGGT	23	0	0	NA	NA	NA	1	1	TypeV-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|136aa|up_9|NZ_CP009427.1_675816_676224_+	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|229aa|up_8|NZ_CP009427.1_676283_676970_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|878aa|up_7|NZ_CP009427.1_677123_679757_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|796aa|up_6|NZ_CP009427.1_679779_682167_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|241aa|up_5|NZ_CP009427.1_682304_683027_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|266aa|up_4|NZ_CP009427.1_683023_683821_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|296aa|up_3|NZ_CP009427.1_683822_684710_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|405aa|up_2|NZ_CP009427.1_684715_685930_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|344aa|up_1|NZ_CP009427.1_685926_686958_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|482aa|up_0|NZ_CP009427.1_686954_688400_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|517aa|down_0|NZ_CP009427.1_691132_692683_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|131aa|down_1|NZ_CP009427.1_692734_693127_-	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|86aa|down_2|NZ_CP009427.1_693123_693381_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|412aa|down_3|NZ_CP009427.1_693563_694799_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|138aa|down_4|NZ_CP009427.1_695049_695463_-	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|79aa|down_5|NZ_CP009427.1_695459_695696_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|169aa|down_6|NZ_CP009427.1_695799_696306_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|157aa|down_7|NZ_CP009427.1_696419_696890_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|254aa|down_8|NZ_CP009427.1_696933_697695_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|104aa|down_9|NZ_CP009427.1_697751_698063_+	pfam03413, PepSY, Peptidase propeptide and YPEB domain
GCF_000756545.1_ASM75654v1	NZ_CP009427	Mycobacterium tuberculosis strain 96121 chromosome, complete genome	4	922180-923127	1	CRT	no	csa3	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type I-A	CGGNGCCGGCGGNNCCGGCGG	21	1	3	922963-922998|922963-922998|922963-922998	NZ_CP009427.1_673023-672988|NZ_CP009427.1_1209297-1209332|NZ_CP009427.1_2441356-2441321	NA	19	19	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|184aa|down_2|NZ_CP009427.1_927137_927689_-,NA|81aa|down_9|NZ_CP009427.1_934510_934753_+	NA|685aa|up_9|NZ_CP009427.1_909815_911870_-	TIGR00350, Transcriptional_regulator_LytR, cell envelope-related function transcriptional attenuator common domain	NA|390aa|up_8|NZ_CP009427.1_912035_913205_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|339aa|up_7|NZ_CP009427.1_913292_914309_-	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain	NA|214aa|up_6|NZ_CP009427.1_914470_915112_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|352aa|up_5|NZ_CP009427.1_915192_916248_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	csa3|131aa|up_4|NZ_CP009427.1_916299_916692_-	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|141aa|up_3|NZ_CP009427.1_916749_917172_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|97aa|up_2|NZ_CP009427.1_917133_917424_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|302aa|up_1|NZ_CP009427.1_917528_918434_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|272aa|up_0|NZ_CP009427.1_918452_919268_-	TIGR04255, hypothetical_protein, TIGR04255 family protein	NA|883aa|down_0|NZ_CP009427.1_923396_926045_-	pfam00934, PE, PE family	NA|215aa|down_1|NZ_CP009427.1_926512_927157_+	pfam14032, PknH_C, PknH-like extracellular domain	NA|184aa|down_2|NZ_CP009427.1_927137_927689_-	NA	NA|421aa|down_3|NZ_CP009427.1_927769_929031_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|241aa|down_4|NZ_CP009427.1_929127_929850_-	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction    only]	NA|343aa|down_5|NZ_CP009427.1_929920_930949_-	COG4861, COG4861, Uncharacterized protein conserved in bacteria [Function unknown]	NA|257aa|down_6|NZ_CP009427.1_931637_932408_+	pfam01427, Peptidase_M15, D-ala-D-ala dipeptidase	NA|271aa|down_7|NZ_CP009427.1_932494_933307_+	pfam13847, Methyltransf_31, Methyltransferase domain	NA|287aa|down_8|NZ_CP009427.1_933374_934235_-	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|81aa|down_9|NZ_CP009427.1_934510_934753_+	NA
GCF_000756545.1_ASM75654v1	NZ_CP009427	Mycobacterium tuberculosis strain 96121 chromosome, complete genome	5	1186862-1186970	4	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GACAGCCAGCCGGCTGACCCGCCGT	25	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|544aa|up_9|NZ_CP009427.1_1176229_1177861_+	cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles	NA|355aa|up_8|NZ_CP009427.1_1177936_1179001_+	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]	NA|158aa|up_7|NZ_CP009427.1_1179053_1179527_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|up_6|NZ_CP009427.1_1179560_1180424_+	cd01908, YafJ, Glutamine amidotransferases class-II (Gn-AT)_YafJ-type	NA|286aa|up_5|NZ_CP009427.1_1180428_1181286_+	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|361aa|up_4|NZ_CP009427.1_1181286_1182369_-	cd07228, Pat_NTE_like_bacteria, Bacterial patatin-like phospholipase domain containing protein 6	NA|140aa|up_3|NZ_CP009427.1_1182449_1182869_-	pfam17301, LpqV, Putative lipoprotein LpqV	NA|189aa|up_2|NZ_CP009427.1_1182980_1183547_+	cd10548, cupin_CDO, cysteine dioxygenase, cupin domain	NA|132aa|up_1|NZ_CP009427.1_1183543_1183939_+	cd01447, Polysulfide_ST, Polysulfide-sulfurtransferase - Rhodanese Homology Domain	NA|668aa|up_0|NZ_CP009427.1_1183966_1185970_-	pfam00934, PE, PE family	NA|588aa|down_0|NZ_CP009427.1_1188055_1189819_-	COG4425, COG4425, Predicted membrane protein [Function unknown]	NA|258aa|down_1|NZ_CP009427.1_1189815_1190589_-	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional	NA|346aa|down_2|NZ_CP009427.1_1190600_1191638_-	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional	NA|279aa|down_3|NZ_CP009427.1_1191824_1192661_+	COG4760, COG4760, Predicted membrane protein [Function unknown]	NA|284aa|down_4|NZ_CP009427.1_1192776_1193628_+	pfam18741, MTES_1575, REase_MTES_1575	NA|406aa|down_5|NZ_CP009427.1_1193701_1194919_-	PRK07851, PRK07851, acetyl-CoA C-acetyltransferase	NA|315aa|down_6|NZ_CP009427.1_1194971_1195916_-	cd01836, FeeA_FeeB_like, SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases	NA|356aa|down_7|NZ_CP009427.1_1196138_1197206_+	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|465aa|down_8|NZ_CP009427.1_1197262_1198657_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|down_9|NZ_CP009427.1_1198858_1199581_+	pfam06271, RDD, RDD family
GCF_000756545.1_ASM75654v1	NZ_CP009427	Mycobacterium tuberculosis strain 96121 chromosome, complete genome	6	1207497-1208353	5	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GGCGGTGTCGGCGGTGCCGGCGG	23	4	68	1207880-1207901|1207925-1207940|1208063-1208084|1208063-1208084|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198|1208180-1208198	NZ_CP009427.1_2970765-2970744|NZ_CP009427.1_2095868-2095853|NZ_CP009427.1_835862-835883|NZ_CP009427.1_1213192-1213213|NZ_CP009427.1_672687-672669|NZ_CP009427.1_1209023-1209041|NZ_CP009427.1_1213165-1213183|NZ_CP009427.1_1213237-1213255|NZ_CP009427.1_1628780-1628762|NZ_CP009427.1_1997296-1997278|NZ_CP009427.1_2068924-2068906|NZ_CP009427.1_2069371-2069353|NZ_CP009427.1_2069470-2069452|NZ_CP009427.1_2812355-2812337|NZ_CP009427.1_2815883-2815865|NZ_CP009427.1_150247-150265|NZ_CP009427.1_333766-333748|NZ_CP009427.1_335185-335167|NZ_CP009427.1_335638-335620|NZ_CP009427.1_335689-335671|NZ_CP009427.1_335698-335680|NZ_CP009427.1_337987-337969|NZ_CP009427.1_338116-338098|NZ_CP009427.1_338383-338365|NZ_CP009427.1_338412-338430|NZ_CP009427.1_338506-338488|NZ_CP009427.1_362231-362213|NZ_CP009427.1_442466-442448|NZ_CP009427.1_545801-545783|NZ_CP009427.1_671853-671835|NZ_CP009427.1_838645-838663|NZ_CP009427.1_1086607-1086625|NZ_CP009427.1_1087255-1087273|NZ_CP009427.1_1091313-1091295|NZ_CP009427.1_1208552-1208570|NZ_CP009427.1_1208942-1208960|NZ_CP009427.1_1213586-1213604|NZ_CP009427.1_1488630-1488612|NZ_CP009427.1_1616744-1616726|NZ_CP009427.1_1617197-1617179|NZ_CP009427.1_1634326-1634308|NZ_CP009427.1_1634335-1634317|NZ_CP009427.1_1864047-1864029|NZ_CP009427.1_1864575-1864557|NZ_CP009427.1_1996570-1996552|NZ_CP009427.1_2007911-2007929|NZ_CP009427.1_2096066-2096048|NZ_CP009427.1_2322558-2322540|NZ_CP009427.1_2375954-2375936|NZ_CP009427.1_2437177-2437195|NZ_CP009427.1_2583782-2583764|NZ_CP009427.1_2706312-2706330|NZ_CP009427.1_2806878-2806860|NZ_CP009427.1_3063079-3063097|NZ_CP009427.1_3063178-3063196|NZ_CP009427.1_3709474-3709492|NZ_CP009427.1_3739921-3739903|NZ_CP009427.1_3740545-3740527|NZ_CP009427.1_3740788-3740770|NZ_CP009427.1_3740921-3740903|NZ_CP009427.1_3803359-3803377|NZ_CP009427.1_3803542-3803560|NZ_CP009427.1_3803710-3803728|NZ_CP009427.1_3932126-3932144|NZ_CP009427.1_3933856-3933874|NZ_CP009427.1_3943177-3943195|NZ_CP009427.1_4033330-4033312|NZ_CP009427.1_4093554-4093572	NA	16	16	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|89aa|up_3|NZ_CP009427.1_1202928_1203195_+,NA|61aa|down_3|NZ_CP009427.1_1210772_1210955_+,NA|35aa|down_4|NZ_CP009427.1_1211064_1211169_+	NA|465aa|up_9|NZ_CP009427.1_1197262_1198657_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|up_8|NZ_CP009427.1_1198858_1199581_+	pfam06271, RDD, RDD family	NA|389aa|up_7|NZ_CP009427.1_1199612_1200779_+	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional	NA|165aa|up_6|NZ_CP009427.1_1200849_1201344_-	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|145aa|up_5|NZ_CP009427.1_1201529_1201964_-	pfam14155, DUF4307, Domain of unknown function (DUF4307)	NA|289aa|up_4|NZ_CP009427.1_1202065_1202932_+	TIGR03446, mycothiol_Mca, mycothiol conjugate amidase Mca	NA|89aa|up_3|NZ_CP009427.1_1202928_1203195_+	NA	NA|674aa|up_2|NZ_CP009427.1_1203181_1205203_+	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]	NA|243aa|up_1|NZ_CP009427.1_1205301_1206030_-	TIGR01065, Hypothetical_UPF0073_protein_yqfA	NA|263aa|up_0|NZ_CP009427.1_1206140_1206929_+	PRK14828, PRK14828, undecaprenyl pyrophosphate synthase; Provisional	NA|107aa|down_0|NZ_CP009427.1_1209587_1209908_+	COG0020, UppS, Undecaprenyl pyrophosphate synthase [Lipid metabolism]	NA|145aa|down_1|NZ_CP009427.1_1210060_1210495_+	pfam00934, PE, PE family	NA|55aa|down_2|NZ_CP009427.1_1210596_1210761_+	smart00637, CBD_II, CBD_II domain	NA|61aa|down_3|NZ_CP009427.1_1210772_1210955_+	NA	NA|35aa|down_4|NZ_CP009427.1_1211064_1211169_+	NA	NA|152aa|down_5|NZ_CP009427.1_1211146_1211602_+	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12	NA|313aa|down_6|NZ_CP009427.1_1214796_1215735_-	PRK05439, PRK05439, pantothenate kinase; Provisional	NA|427aa|down_7|NZ_CP009427.1_1216122_1217403_+	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|276aa|down_8|NZ_CP009427.1_1217507_1218335_+	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain	NA|434aa|down_9|NZ_CP009427.1_1218545_1219847_+	COG1875, COG1875, NYN ribonuclease and ATPase of PhoH family domains [General    function prediction only]
GCF_000756545.1_ASM75654v1	NZ_CP009427	Mycobacterium tuberculosis strain 96121 chromosome, complete genome	7	1570247-1571319	6	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	32	0	0	NA	NA	NA	15	15	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|106aa|up_7|NZ_CP009427.1_1562010_1562328_+,NA	NA|103aa|up_9|NZ_CP009427.1_1559525_1559834_+	pfam00934, PE, PE family	NA|540aa|up_8|NZ_CP009427.1_1559830_1561450_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|106aa|up_7|NZ_CP009427.1_1562010_1562328_+	NA	NA|209aa|up_6|NZ_CP009427.1_1562462_1563089_+	PRK00300, gmk, guanylate kinase; Provisional	NA|111aa|up_5|NZ_CP009427.1_1563154_1563487_+	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit	NA|419aa|up_4|NZ_CP009427.1_1563502_1564759_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|404aa|up_3|NZ_CP009427.1_1564886_1566098_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|493aa|up_2|NZ_CP009427.1_1566170_1567649_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|462aa|up_1|NZ_CP009427.1_1567645_1569031_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|345aa|up_0|NZ_CP009427.1_1569108_1570143_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|134aa|down_0|NZ_CP009427.1_1572173_1572575_-	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|86aa|down_1|NZ_CP009427.1_1572571_1572829_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|320aa|down_2|NZ_CP009427.1_1572911_1573871_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|321aa|down_3|NZ_CP009427.1_1573895_1574858_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|201aa|down_4|NZ_CP009427.1_1574991_1575594_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|656aa|down_5|NZ_CP009427.1_1575674_1577642_+	PRK14873, PRK14873, primosomal protein N'	NA|275aa|down_6|NZ_CP009427.1_1577659_1578484_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|161aa|down_7|NZ_CP009427.1_1578652_1579135_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|down_8|NZ_CP009427.1_1579206_1580031_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|313aa|down_9|NZ_CP009427.1_1580227_1581166_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed
GCF_000756545.1_ASM75654v1	NZ_CP009427	Mycobacterium tuberculosis strain 96121 chromosome, complete genome	8	1630937-1631776	2	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCGCCGNNNCCGCCNNN	18	3	11	1631327-1631344|1631327-1631344|1631327-1631344|1631327-1631344|1631327-1631344|1631327-1631344|1631429-1631446|1631429-1631446|1631429-1631446|1631429-1631446|1631522-1631539	NZ_CP009427.1_4033798-4033815|NZ_CP009427.1_361996-361979|NZ_CP009427.1_362068-362051|NZ_CP009427.1_631371-631388|NZ_CP009427.1_3943612-3943595|NZ_CP009427.1_4243944-4243927|NZ_CP009427.1_335341-335358|NZ_CP009427.1_837364-837347|NZ_CP009427.1_1208498-1208481|NZ_CP009427.1_3063259-3063242|NZ_CP009427.1_4201683-4201666	NA	16	16	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|38aa|up_6|NZ_CP009427.1_1621205_1621319_-,NA|137aa|up_5|NZ_CP009427.1_1621368_1621779_-,NA|288aa|down_4|NZ_CP009427.1_1638968_1639832_+	NA|492aa|up_9|NZ_CP009427.1_1616290_1617766_-	pfam00934, PE, PE family	NA|767aa|up_8|NZ_CP009427.1_1617872_1620173_+	TIGR00509, Trimethylamine-N-oxide_reductase_1, molybdopterin guanine dinucleotide-containing S/N-oxide reductases	NA|162aa|up_7|NZ_CP009427.1_1620288_1620774_-	cd07820, SRPBCC_3, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|38aa|up_6|NZ_CP009427.1_1621205_1621319_-	NA	NA|137aa|up_5|NZ_CP009427.1_1621368_1621779_-	NA	NA|248aa|up_4|NZ_CP009427.1_1621795_1622539_-	pfam01182, Glucosamine_iso, Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	NA|304aa|up_3|NZ_CP009427.1_1622535_1623447_-	TIGR00534, Putative_OxPP_cycle_protein_OpcA, glucose-6-phosphate dehydrogenase assembly protein OpcA	NA|515aa|up_2|NZ_CP009427.1_1623499_1625044_-	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|374aa|up_1|NZ_CP009427.1_1625040_1626162_-	PRK03343, PRK03343, transaldolase; Validated	NA|701aa|up_0|NZ_CP009427.1_1626178_1628281_-	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|309aa|down_0|NZ_CP009427.1_1633317_1634244_+	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional	NA|742aa|down_1|NZ_CP009427.1_1634292_1636518_-	pfam00934, PE, PE family	NA|422aa|down_2|NZ_CP009427.1_1636669_1637935_+	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|329aa|down_3|NZ_CP009427.1_1637962_1638949_-	cd05286, QOR2, Quinone oxidoreductase (QOR)	NA|288aa|down_4|NZ_CP009427.1_1638968_1639832_+	NA	NA|311aa|down_5|NZ_CP009427.1_1639781_1640714_-	COG1612, CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]	NA|262aa|down_6|NZ_CP009427.1_1640825_1641611_-	TIGR00025, Mtu_efflux, ABC transporter efflux protein, DrrB family	NA|314aa|down_7|NZ_CP009427.1_1641607_1642549_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|592aa|down_8|NZ_CP009427.1_1642704_1644480_-	TIGR03459, crt_membr, carotene biosynthesis associated membrane protein	NA|269aa|down_9|NZ_CP009427.1_1644527_1645334_+	COG2345, COG2345, Predicted transcriptional regulator [Transcription]
GCF_000756545.1_ASM75654v1	NZ_CP009427	Mycobacterium tuberculosis strain 96121 chromosome, complete genome	9	1635048-1635377	3	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	NGCCGCCGGCNCCGCCGN	18	0	0	NA	NA	NA	6	6	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|38aa|up_8|NZ_CP009427.1_1621205_1621319_-,NA|137aa|up_7|NZ_CP009427.1_1621368_1621779_-,NA|288aa|down_2|NZ_CP009427.1_1638968_1639832_+	NA|162aa|up_9|NZ_CP009427.1_1620288_1620774_-	cd07820, SRPBCC_3, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|38aa|up_8|NZ_CP009427.1_1621205_1621319_-	NA	NA|137aa|up_7|NZ_CP009427.1_1621368_1621779_-	NA	NA|248aa|up_6|NZ_CP009427.1_1621795_1622539_-	pfam01182, Glucosamine_iso, Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	NA|304aa|up_5|NZ_CP009427.1_1622535_1623447_-	TIGR00534, Putative_OxPP_cycle_protein_OpcA, glucose-6-phosphate dehydrogenase assembly protein OpcA	NA|515aa|up_4|NZ_CP009427.1_1623499_1625044_-	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|374aa|up_3|NZ_CP009427.1_1625040_1626162_-	PRK03343, PRK03343, transaldolase; Validated	NA|701aa|up_2|NZ_CP009427.1_1626178_1628281_-	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|1399aa|up_1|NZ_CP009427.1_1628719_1632916_-	pfam00934, PE, PE family	NA|309aa|up_0|NZ_CP009427.1_1633317_1634244_+	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional	NA|422aa|down_0|NZ_CP009427.1_1636669_1637935_+	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|329aa|down_1|NZ_CP009427.1_1637962_1638949_-	cd05286, QOR2, Quinone oxidoreductase (QOR)	NA|288aa|down_2|NZ_CP009427.1_1638968_1639832_+	NA	NA|311aa|down_3|NZ_CP009427.1_1639781_1640714_-	COG1612, CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]	NA|262aa|down_4|NZ_CP009427.1_1640825_1641611_-	TIGR00025, Mtu_efflux, ABC transporter efflux protein, DrrB family	NA|314aa|down_5|NZ_CP009427.1_1641607_1642549_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|592aa|down_6|NZ_CP009427.1_1642704_1644480_-	TIGR03459, crt_membr, carotene biosynthesis associated membrane protein	NA|269aa|down_7|NZ_CP009427.1_1644527_1645334_+	COG2345, COG2345, Predicted transcriptional regulator [Transcription]	NA|847aa|down_8|NZ_CP009427.1_1645330_1647871_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|398aa|down_9|NZ_CP009427.1_1647867_1649061_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]
GCF_000756545.1_ASM75654v1	NZ_CP009427	Mycobacterium tuberculosis strain 96121 chromosome, complete genome	10	2095538-2095792	4	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCNCCGTCGCCGCCNNTGCC	21	2	3	2095619-2095636|2095619-2095636|2095709-2095726	NZ_CP009427.1_400240-400223|NZ_CP009427.1_606313-606296|NZ_CP009427.1_3456367-3456350	NA	5	5	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|88aa|up_0|NZ_CP009427.1_2094897_2095161_-,NA	NA|165aa|up_9|NZ_CP009427.1_2081247_2081742_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|226aa|up_8|NZ_CP009427.1_2082089_2082767_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|942aa|up_7|NZ_CP009427.1_2083125_2085951_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|287aa|up_6|NZ_CP009427.1_2086177_2087038_-	PRK03204, PRK03204, haloalkane dehalogenase; Provisional	NA|289aa|up_5|NZ_CP009427.1_2087078_2087945_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|629aa|up_4|NZ_CP009427.1_2087949_2089836_-	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c	NA|678aa|up_3|NZ_CP009427.1_2089851_2091885_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|742aa|up_2|NZ_CP009427.1_2092004_2094230_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|132aa|up_1|NZ_CP009427.1_2094505_2094901_-	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|88aa|up_0|NZ_CP009427.1_2094897_2095161_-	NA	NA|350aa|down_0|NZ_CP009427.1_2096929_2097979_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|456aa|down_1|NZ_CP009427.1_2097978_2099346_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|479aa|down_2|NZ_CP009427.1_2099519_2100956_-	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein	NA|484aa|down_3|NZ_CP009427.1_2100991_2102443_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|317aa|down_4|NZ_CP009427.1_2102472_2103423_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|139aa|down_5|NZ_CP009427.1_2103437_2103854_-	COG3682, COG3682, Predicted transcriptional regulator [Transcription]	NA|141aa|down_6|NZ_CP009427.1_2104131_2104554_+	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|101aa|down_7|NZ_CP009427.1_2104602_2104905_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|105aa|down_8|NZ_CP009427.1_2104901_2105216_+	PRK13202, ureB, urease subunit beta; Reviewed	NA|578aa|down_9|NZ_CP009427.1_2105215_2106949_+	PRK13206, ureC, urease subunit alpha; Reviewed
GCF_000756545.1_ASM75654v1	NZ_CP009427	Mycobacterium tuberculosis strain 96121 chromosome, complete genome	11	2176472-2176691	7	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	49	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|157aa|up_8|NZ_CP009427.1_2159720_2160191_-,NA|136aa|up_1|NZ_CP009427.1_2167215_2167623_-,NA|127aa|down_5|NZ_CP009427.1_2184207_2184588_-	NA|321aa|up_9|NZ_CP009427.1_2158728_2159691_-	pfam01266, DAO, FAD dependent oxidoreductase	NA|157aa|up_8|NZ_CP009427.1_2159720_2160191_-	NA	NA|216aa|up_7|NZ_CP009427.1_2160530_2161178_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|741aa|up_6|NZ_CP009427.1_2161184_2163407_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_5|NZ_CP009427.1_2163444_2163888_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_4|NZ_CP009427.1_2164001_2164595_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_3|NZ_CP009427.1_2164677_2165283_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|251aa|up_2|NZ_CP009427.1_2166485_2167238_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_1|NZ_CP009427.1_2167215_2167623_-	NA	NA|767aa|up_0|NZ_CP009427.1_2167757_2170058_+	PLN02892, PLN02892, isocitrate lyase	NA|155aa|down_0|NZ_CP009427.1_2178718_2179183_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_1|NZ_CP009427.1_2179280_2180144_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_2|NZ_CP009427.1_2180181_2181453_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_3|NZ_CP009427.1_2181724_2182840_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_4|NZ_CP009427.1_2182830_2184171_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_5|NZ_CP009427.1_2184207_2184588_-	NA	NA|621aa|down_6|NZ_CP009427.1_2184744_2186607_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_7|NZ_CP009427.1_2186614_2187094_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_8|NZ_CP009427.1_2187330_2188104_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|421aa|down_9|NZ_CP009427.1_2188443_2189705_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed
GCF_000756545.1_ASM75654v1	NZ_CP009427	Mycobacterium tuberculosis strain 96121 chromosome, complete genome	12	3129011-3131120	1,8,5	PILER-CR,CRISPRCasFinder,CRT	no	c2c9_V-U4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-C,Type III-D,Type III-A,Type III-B	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,NNNNNNNNGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,44	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	27,27,28	28	TypeIII-C,TypeIII-D,TypeIII-A,TypeIII-B	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_8|NZ_CP009427.1_3122290_3122545_-,NA|135aa|up_7|NZ_CP009427.1_3122692_3123097_+,NA|64aa|up_6|NZ_CP009427.1_3123093_3123285_+,NA|86aa|up_4|NZ_CP009427.1_3124871_3125129_+,NA|104aa|up_3|NZ_CP009427.1_3125233_3125545_+,NA|203aa|up_2|NZ_CP009427.1_3125964_3126573_+,NA	NA|92aa|up_9|NZ_CP009427.1_3121839_3122115_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_8|NZ_CP009427.1_3122290_3122545_-	NA	NA|135aa|up_7|NZ_CP009427.1_3122692_3123097_+	NA	NA|64aa|up_6|NZ_CP009427.1_3123093_3123285_+	NA	NA|385aa|up_5|NZ_CP009427.1_3123483_3124638_+	pfam00665, rve, Integrase core domain	NA|86aa|up_4|NZ_CP009427.1_3124871_3125129_+	NA	NA|104aa|up_3|NZ_CP009427.1_3125233_3125545_+	NA	NA|203aa|up_2|NZ_CP009427.1_3125964_3126573_+	NA	NA|470aa|up_1|NZ_CP009427.1_3126643_3128053_+	pfam00665, rve, Integrase core domain	NA|271aa|up_0|NZ_CP009427.1_3128049_3128862_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|down_0|NZ_CP009427.1_3131146_3132408_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_1|NZ_CP009427.1_3134726_3135068_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_2|NZ_CP009427.1_3135068_3136085_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_3|NZ_CP009427.1_3136097_3137246_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_4|NZ_CP009427.1_3137341_3138469_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_5|NZ_CP009427.1_3138465_3139374_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_6|NZ_CP009427.1_3139354_3140065_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_7|NZ_CP009427.1_3140074_3140449_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_8|NZ_CP009427.1_3140445_3142884_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_9|NZ_CP009427.1_3142880_3143603_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]
GCF_000756545.1_ASM75654v1	NZ_CP009427	Mycobacterium tuberculosis strain 96121 chromosome, complete genome	13	3132443-3134678	9,6,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-C,Type III-D,Type III-A,Type III-B	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	30,30,29	30	TypeIII-C,TypeIII-D,TypeIII-A,TypeIII-B	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_9|NZ_CP009427.1_3122290_3122545_-,NA|135aa|up_8|NZ_CP009427.1_3122692_3123097_+,NA|64aa|up_7|NZ_CP009427.1_3123093_3123285_+,NA|86aa|up_5|NZ_CP009427.1_3124871_3125129_+,NA|104aa|up_4|NZ_CP009427.1_3125233_3125545_+,NA|203aa|up_3|NZ_CP009427.1_3125964_3126573_+,NA	NA|85aa|up_9|NZ_CP009427.1_3122290_3122545_-	NA	NA|135aa|up_8|NZ_CP009427.1_3122692_3123097_+	NA	NA|64aa|up_7|NZ_CP009427.1_3123093_3123285_+	NA	NA|385aa|up_6|NZ_CP009427.1_3123483_3124638_+	pfam00665, rve, Integrase core domain	NA|86aa|up_5|NZ_CP009427.1_3124871_3125129_+	NA	NA|104aa|up_4|NZ_CP009427.1_3125233_3125545_+	NA	NA|203aa|up_3|NZ_CP009427.1_3125964_3126573_+	NA	NA|470aa|up_2|NZ_CP009427.1_3126643_3128053_+	pfam00665, rve, Integrase core domain	NA|271aa|up_1|NZ_CP009427.1_3128049_3128862_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|up_0|NZ_CP009427.1_3131146_3132408_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_0|NZ_CP009427.1_3134726_3135068_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_1|NZ_CP009427.1_3135068_3136085_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_2|NZ_CP009427.1_3136097_3137246_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_3|NZ_CP009427.1_3137341_3138469_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_4|NZ_CP009427.1_3138465_3139374_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_5|NZ_CP009427.1_3139354_3140065_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_6|NZ_CP009427.1_3140074_3140449_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_7|NZ_CP009427.1_3140445_3142884_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_8|NZ_CP009427.1_3142880_3143603_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|182aa|down_9|NZ_CP009427.1_3144002_3144548_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_000756545.1_ASM75654v1	NZ_CP009427	Mycobacterium tuberculosis strain 96121 chromosome, complete genome	14	3764843-3764969	3	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTTGCCGATGCCGGTGTTGAAA	22	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|96aa|up_0|NZ_CP009427.1_3757687_3757975_-,NA|87aa|down_3|NZ_CP009427.1_3771095_3771356_-	NA|410aa|up_9|NZ_CP009427.1_3728772_3730002_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_8|NZ_CP009427.1_3730284_3731634_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_7|NZ_CP009427.1_3731645_3732785_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_6|NZ_CP009427.1_3732781_3733513_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|1948aa|up_5|NZ_CP009427.1_3733521_3739365_-	pfam00823, PPE, PPE family	NA|339aa|up_4|NZ_CP009427.1_3739413_3740430_-	pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal	NA|86aa|up_3|NZ_CP009427.1_3745559_3745817_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|149aa|up_2|NZ_CP009427.1_3756169_3756616_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|up_1|NZ_CP009427.1_3756652_3757393_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|up_0|NZ_CP009427.1_3757687_3757975_-	NA	NA|265aa|down_0|NZ_CP009427.1_3769705_3770500_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_1|NZ_CP009427.1_3770581_3770953_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|73aa|down_2|NZ_CP009427.1_3770850_3771069_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_3|NZ_CP009427.1_3771095_3771356_-	NA	NA|130aa|down_4|NZ_CP009427.1_3771470_3771860_+	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|98aa|down_5|NZ_CP009427.1_3771873_3772167_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|282aa|down_6|NZ_CP009427.1_3772163_3773009_-	PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	NA|92aa|down_7|NZ_CP009427.1_3773132_3773408_+	COG2161, StbD, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|86aa|down_8|NZ_CP009427.1_3773404_3773662_+	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system	NA|397aa|down_9|NZ_CP009427.1_3773703_3774894_+	cd02803, OYE_like_FMN_family, Old yellow enzyme (OYE)-like FMN binding domain
GCF_000756545.1_ASM75654v1	NZ_CP009427	Mycobacterium tuberculosis strain 96121 chromosome, complete genome	15	3848484-3848573	10	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCAGGCGTTGGGCTGGCTGCCGAT	24	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|77aa|up_7|NZ_CP009427.1_3841878_3842109_+,NA|121aa|up_6|NZ_CP009427.1_3842212_3842575_-,NA|73aa|up_2|NZ_CP009427.1_3846549_3846768_-,NA|121aa|down_0|NZ_CP009427.1_3849558_3849921_-,NA|52aa|down_2|NZ_CP009427.1_3851762_3851918_-,NA|52aa|down_3|NZ_CP009427.1_3851942_3852098_-,NA|238aa|down_6|NZ_CP009427.1_3856133_3856847_-	NA|169aa|up_9|NZ_CP009427.1_3840189_3840696_-	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only]	NA|409aa|up_8|NZ_CP009427.1_3840692_3841919_-	PRK00053, alr, alanine racemase; Reviewed	NA|77aa|up_7|NZ_CP009427.1_3841878_3842109_+	NA	NA|121aa|up_6|NZ_CP009427.1_3842212_3842575_-	NA	NA|177aa|up_5|NZ_CP009427.1_3842737_3843268_+	pfam00823, PPE, PPE family	NA|177aa|up_4|NZ_CP009427.1_3843534_3844065_+	pfam00823, PPE, PPE family	NA|725aa|up_3|NZ_CP009427.1_3844382_3846557_-	COG1484, DnaC, DNA replication protein [DNA replication, recombination, and repair]	NA|73aa|up_2|NZ_CP009427.1_3846549_3846768_-	NA	NA|100aa|up_1|NZ_CP009427.1_3847262_3847562_+	pfam00934, PE, PE family	NA|181aa|up_0|NZ_CP009427.1_3847647_3848190_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|121aa|down_0|NZ_CP009427.1_3849558_3849921_-	NA	NA|179aa|down_1|NZ_CP009427.1_3850083_3850620_+	pfam00823, PPE, PPE family	NA|52aa|down_2|NZ_CP009427.1_3851762_3851918_-	NA	NA|52aa|down_3|NZ_CP009427.1_3851942_3852098_-	NA	NA|461aa|down_4|NZ_CP009427.1_3853290_3854673_-	TIGR01788, Glutamate_decarboxylase_alpha_GAD-alpha	NA|474aa|down_5|NZ_CP009427.1_3854710_3856132_-	pfam01256, Carb_kinase, Carbohydrate kinase	NA|238aa|down_6|NZ_CP009427.1_3856133_3856847_-	NA	NA|285aa|down_7|NZ_CP009427.1_3856857_3857712_-	pfam14494, DUF4436, Domain of unknown function (DUF4436)	NA|625aa|down_8|NZ_CP009427.1_3857933_3859808_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|159aa|down_9|NZ_CP009427.1_3859829_3860306_+	pfam10708, DUF2510, Protein of unknown function (DUF2510)
GCF_000756545.1_ASM75654v1	NZ_CP009427	Mycobacterium tuberculosis strain 96121 chromosome, complete genome	16	3950203-3951639	7	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CNNCGGCGGNNCCGGCGGCNNNGGCGGNNCCGGCGG	36	4	9	3950239-3950316|3950353-3950424|3950353-3950424|3950461-3950508|3950461-3950508|3950461-3950508|3950545-3950580|3950545-3950580|3950545-3950580	NZ_CP009427.1_3949888-3949965|NZ_CP009427.1_3949651-3949722|NZ_CP009427.1_3950002-3950073|NZ_CP009427.1_3949417-3949464|NZ_CP009427.1_3949759-3949806|NZ_CP009427.1_3950110-3950157|NZ_CP009427.1_3949492-3949527|NZ_CP009427.1_3949834-3949869|NZ_CP009427.1_3950185-3950220	NA	18	18	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|134aa|up_2|NZ_CP009427.1_3945527_3945929_-,NA|384aa|up_1|NZ_CP009427.1_3946241_3947393_+,NA|280aa|down_2|NZ_CP009427.1_3955026_3955866_+	NA|374aa|up_9|NZ_CP009427.1_3925304_3926426_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_8|NZ_CP009427.1_3926496_3928005_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|1382aa|up_7|NZ_CP009427.1_3928175_3932321_+	pfam00934, PE, PE family	NA|516aa|up_6|NZ_CP009427.1_3939297_3940845_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|up_5|NZ_CP009427.1_3940841_3941678_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|718aa|up_4|NZ_CP009427.1_3942037_3944191_+	pfam00934, PE, PE family	NA|446aa|up_3|NZ_CP009427.1_3944150_3945488_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|134aa|up_2|NZ_CP009427.1_3945527_3945929_-	NA	NA|384aa|up_1|NZ_CP009427.1_3946241_3947393_+	NA	NA|219aa|up_0|NZ_CP009427.1_3947521_3948178_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|549aa|down_0|NZ_CP009427.1_3952419_3954066_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_1|NZ_CP009427.1_3954139_3954931_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_2|NZ_CP009427.1_3955026_3955866_+	NA	NA|399aa|down_3|NZ_CP009427.1_3955920_3957117_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_4|NZ_CP009427.1_3957145_3957856_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|348aa|down_5|NZ_CP009427.1_3957920_3958964_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|304aa|down_6|NZ_CP009427.1_3959116_3960028_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|355aa|down_7|NZ_CP009427.1_3960043_3961108_+	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|395aa|down_8|NZ_CP009427.1_3961124_3962309_+	PRK08313, PRK08313, thiolase domain-containing protein	NA|344aa|down_9|NZ_CP009427.1_3962350_3963382_+	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD
GCF_000756545.1_ASM75654v1	NZ_CP009427	Mycobacterium tuberculosis strain 96121 chromosome, complete genome	17	4109971-4110059	11	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCTCGGCGACGATGCGGGCCGGATGACGGCC	31	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|257aa|up_6|NZ_CP009427.1_4100557_4101328_-,NA|233aa|up_0|NZ_CP009427.1_4109075_4109774_-,NA|126aa|down_6|NZ_CP009427.1_4115294_4115672_+	NA|388aa|up_9|NZ_CP009427.1_4096228_4097392_-	TIGR03819, heli_sec_ATPase, helicase/secretion neighborhood ATPase	NA|351aa|up_8|NZ_CP009427.1_4097388_4098441_-	TIGR03815, CpaE_hom_Actino, helicase/secretion neighborhood CpaE-like protein	NA|288aa|up_7|NZ_CP009427.1_4098939_4099803_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|257aa|up_6|NZ_CP009427.1_4100557_4101328_-	NA	NA|549aa|up_5|NZ_CP009427.1_4101324_4102971_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|288aa|up_4|NZ_CP009427.1_4102967_4103831_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|up_3|NZ_CP009427.1_4103823_4104750_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|up_2|NZ_CP009427.1_4104751_4106377_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|652aa|up_1|NZ_CP009427.1_4107084_4109040_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|233aa|up_0|NZ_CP009427.1_4109075_4109774_-	NA	NA|173aa|down_0|NZ_CP009427.1_4110119_4110638_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|328aa|down_1|NZ_CP009427.1_4110638_4111622_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_2|NZ_CP009427.1_4111614_4112808_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|274aa|down_3|NZ_CP009427.1_4112813_4113635_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|228aa|down_4|NZ_CP009427.1_4113766_4114450_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|246aa|down_5|NZ_CP009427.1_4114449_4115187_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|126aa|down_6|NZ_CP009427.1_4115294_4115672_+	NA	NA|225aa|down_7|NZ_CP009427.1_4115770_4116445_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|265aa|down_8|NZ_CP009427.1_4116550_4117345_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|152aa|down_9|NZ_CP009427.1_4117351_4117807_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
