The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP008920	Providencia stuartii strain ATCC 33672 chromosome, complete genome	4285951	2322897	2333489	4285951		Mycobacterium_phage(25.0%)	11	NA	NA
WP_004917599.1|2322897_2324100_-	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	NA	G3M9Y6	Bacillus_virus	36.8	6.4e-28
WP_004917602.1|2324826_2325798_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A0M4S3B4	Mycobacterium_phage	72.8	1.6e-133
WP_071599640.1|2325811_2327944_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	52.2	4.4e-213
WP_004917606.1|2327954_2328368_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A142F1R4	Bacillus_phage	41.9	5.3e-14
WP_004917608.1|2328377_2328605_-	glutaredoxin-like protein NrdH	NA	V5UN81	Mycobacterium_phage	56.2	1.6e-17
WP_004917609.1|2328895_2329366_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A2P1EL10	Moumouvirus	35.7	7.6e-17
WP_014657708.1|2329572_2329782_+	transcription antiterminator/RNA stability regulator CspE	NA	A0A1W6JNX5	Morganella_phage	79.7	7.7e-22
WP_004917612.1|2329924_2330890_-	lipoyl synthase	NA	NA	NA	NA	NA
WP_014657709.1|2331013_2331658_-	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_004917614.1|2331917_2332181_-	YbeD family protein	NA	NA	NA	NA	NA
WP_004917615.1|2332280_2333489_-	D-alanyl-D-alanine carboxypeptidase DacA	NA	B6DZZ7	Stx2-converting_phage	50.9	8.8e-110
>prophage 2
NZ_CP008920	Providencia stuartii strain ATCC 33672 chromosome, complete genome	4285951	2507306	2515260	4285951		Escherichia_phage(50.0%)	8	NA	NA
WP_040132936.1|2507306_2509727_+	molybdopterin-dependent oxidoreductase	NA	A0A077SK27	Escherichia_phage	38.6	1.5e-140
WP_040132937.1|2509723_2510365_+	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	57.0	8.1e-62
WP_040132938.1|2510361_2511264_+	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA	NA
WP_040132939.1|2511275_2511848_+	hypothetical protein	NA	A0A077SLS7	Escherichia_phage	39.2	9.2e-17
WP_040132940.1|2512066_2512318_+	uridine kinase	NA	NA	NA	NA	NA
WP_052038355.1|2512566_2513100_+	dCTP deaminase	NA	I4AZP2	Saccharomonospora_phage	33.9	1.7e-20
WP_004917981.1|2513982_2514627_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	41.2	1.4e-37
WP_004917983.1|2514678_2515260_+	dCTP deaminase	NA	I4AZP2	Saccharomonospora_phage	41.1	7.4e-30
>prophage 3
NZ_CP008920	Providencia stuartii strain ATCC 33672 chromosome, complete genome	4285951	2560014	2570710	4285951	protease,tRNA	Paramecium_bursaria_Chlorella_virus(16.67%)	10	NA	NA
WP_040132953.1|2560014_2560860_+	hydrolase	NA	M1I6H3	Paramecium_bursaria_Chlorella_virus	29.3	7.0e-21
WP_004918066.1|2560856_2561606_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014657829.1|2561749_2562688_+	DUF1177 domain-containing protein	NA	NA	NA	NA	NA
WP_004918068.1|2562791_2563043_-	cold shock domain-containing protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	56.7	1.3e-15
WP_004918070.1|2563426_2563747_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	48.4	1.7e-15
WP_004918072.1|2563777_2566063_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.9	8.4e-170
WP_004244560.1|2566129_2566348_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_004918075.1|2566488_2567190_-|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_040132954.1|2567198_2568941_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	W8CYL7	Bacillus_phage	24.9	5.9e-22
WP_040132955.1|2568943_2570710_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	NA	F2Y302	Organic_Lake_phycodnavirus	32.8	1.4e-15
>prophage 4
NZ_CP008920	Providencia stuartii strain ATCC 33672 chromosome, complete genome	4285951	2862243	2924937	4285951	terminase,holin,protease,transposase	Cronobacter_phage(28.57%)	56	NA	NA
WP_004918722.1|2862243_2864286_-|holin	choline transporter	holin	A0A2I7QNT1	Vibrio_phage	28.2	1.2e-21
WP_014658086.1|2864497_2865094_+	transcriptional regulator BetI	NA	NA	NA	NA	NA
WP_004918726.1|2865128_2866607_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_004918727.1|2866646_2868314_+|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	30.7	5.2e-52
WP_004918729.1|2868545_2868893_-	divalent-cation tolerance protein CutA	NA	NA	NA	NA	NA
WP_040133019.1|2869570_2871043_+	DASS family sodium-coupled anion symporter	NA	NA	NA	NA	NA
WP_004918732.1|2871099_2871309_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004918734.1|2871634_2872507_+	DMT family transporter	NA	NA	NA	NA	NA
WP_004918736.1|2872667_2872988_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040133020.1|2873036_2874131_-	NADH:flavin oxidoreductase/NADH oxidase	NA	NA	NA	NA	NA
WP_014658090.1|2874727_2876044_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_040133451.1|2876421_2877126_+	RNA ligase family protein	NA	A0A292GKV8	Xanthomonas_phage	32.1	4.2e-19
WP_040133021.1|2877122_2878250_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_036943769.1|2878306_2879362_-	4-oxalomesaconate tautomerase	NA	NA	NA	NA	NA
WP_004918749.1|2879539_2880973_-	anion permease	NA	NA	NA	NA	NA
WP_040133022.1|2881209_2882115_-	triphosphoribosyl-dephospho-CoA synthase CitG	NA	NA	NA	NA	NA
WP_004918752.1|2882095_2882641_-	citrate lyase holo-[acyl-carrier protein] synthase	NA	NA	NA	NA	NA
WP_004918753.1|2882645_2884172_-	citrate lyase subunit alpha	NA	NA	NA	NA	NA
WP_004918754.1|2884182_2885079_-	citrate (pro-3S)-lyase subunit beta	NA	NA	NA	NA	NA
WP_004918755.1|2885078_2885375_-	citrate lyase acyl carrier protein	NA	NA	NA	NA	NA
WP_036943776.1|2885371_2886448_-	[citrate (pro-3S)-lyase] ligase	NA	NA	NA	NA	NA
WP_014658097.1|2886819_2888457_+	sensor histidine kinase DpiB	NA	NA	NA	NA	NA
WP_004918761.1|2888449_2889133_+	two-component response regulator DpiA	NA	NA	NA	NA	NA
WP_040133023.1|2889198_2890230_-	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_004918766.1|2891268_2892744_+	dipeptide/tripeptide permease DtpA	NA	NA	NA	NA	NA
WP_014658099.1|2892884_2893373_-	DUF4822 domain-containing protein	NA	NA	NA	NA	NA
WP_004918770.1|2893553_2894537_-	class II fructose-bisphosphatase	NA	NA	NA	NA	NA
WP_040133024.1|2894664_2895588_-	transporter	NA	NA	NA	NA	NA
WP_014658101.1|2896145_2898935_+	DUF2339 domain-containing protein	NA	NA	NA	NA	NA
WP_004918779.1|2898921_2900394_+	DUF3999 family protein	NA	NA	NA	NA	NA
WP_014658102.1|2900595_2900862_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004918784.1|2900935_2901340_+	GFA family protein	NA	NA	NA	NA	NA
WP_014658103.1|2901548_2901965_+	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA	NA
WP_014658104.1|2902259_2903813_+	AbgT family transporter	NA	NA	NA	NA	NA
WP_040133025.1|2903848_2905081_+	peptidase T	NA	NA	NA	NA	NA
WP_004918792.1|2905302_2905989_+	response regulator	NA	NA	NA	NA	NA
WP_004918794.1|2905955_2907788_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_014658106.1|2907845_2908394_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_040133027.1|2911589_2912363_+	antitermination protein	NA	F1C595	Cronobacter_phage	49.2	4.1e-68
WP_014658133.1|2912677_2913010_-	hypothetical protein	NA	NA	NA	NA	NA
WP_120752678.1|2913198_2913318_+	hypothetical protein	NA	NA	NA	NA	NA
WP_105874340.1|2913529_2913778_+|holin	holin	holin	F1C5D1	Cronobacter_phage	56.1	1.0e-20
WP_040133028.1|2913770_2914163_+	M15 family metallopeptidase	NA	A0A1P8DTE2	Proteus_phage	86.2	3.6e-44
WP_040133029.1|2914181_2914559_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040133030.1|2914893_2915223_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040133031.1|2915261_2915531_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040133032.1|2915605_2916619_+|terminase	terminase small subunit	terminase	A0A0U2RXW9	Escherichia_phage	35.8	1.0e-34
WP_040132423.1|2916866_2917901_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_040133033.1|2918179_2918800_-	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_040133034.1|2919550_2920129_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040133035.1|2921020_2921242_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040133036.1|2921313_2921589_+	MafI family immunity protein	NA	NA	NA	NA	NA
WP_014658143.1|2921834_2922224_+	VOC family protein	NA	NA	NA	NA	NA
WP_004918840.1|2923020_2923254_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014658144.1|2923283_2923478_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040133037.1|2924280_2924937_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 5
NZ_CP008920	Providencia stuartii strain ATCC 33672 chromosome, complete genome	4285951	3498714	3507911	4285951	protease,transposase	Cafeteria_roenbergensis_virus(16.67%)	7	NA	NA
WP_004920153.1|3498714_3500748_+	M13 family metallopeptidase	NA	E3T4I7	Cafeteria_roenbergensis_virus	33.7	8.2e-100
WP_004920157.1|3500995_3501520_-	superoxide dismutase	NA	Q9MC02	Salmonella_phage	50.6	1.2e-42
WP_040133195.1|3501875_3504470_-	type I DNA topoisomerase	NA	A0A2K9L1Q2	Tupanvirus	34.9	1.2e-90
WP_004920169.1|3504760_3505009_+	DUF2498 family protein	NA	NA	NA	NA	NA
WP_004924658.1|3505224_3506394_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SLN2	Escherichia_phage	86.6	1.3e-190
WP_004924660.1|3506450_3506876_+|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	50.4	5.2e-25
WP_052038367.1|3506903_3507911_-|protease	protease SohB	protease	A0A2H4UUF9	Bodo_saltans_virus	33.1	2.9e-21
>prophage 6
NZ_CP008920	Providencia stuartii strain ATCC 33672 chromosome, complete genome	4285951	3848457	3859704	4285951	plate,tail	Haemophilus_phage(40.0%)	13	NA	NA
WP_040133267.1|3848457_3849075_-|tail	tail assembly protein	tail	K7PMH7	Enterobacteria_phage	42.5	1.8e-34
WP_040133268.1|3849074_3850721_-	histidine kinase	NA	K7P7Q7	Enterobacteria_phage	51.7	2.3e-36
WP_040133269.1|3850707_3851364_-	DUF2612 domain-containing protein	NA	D0UIH4	Aggregatibacter_phage	43.3	1.3e-35
WP_040133270.1|3851356_3852481_-|plate	baseplate J/gp47 family protein	plate	D0UIH5	Aggregatibacter_phage	41.1	2.9e-78
WP_040133271.1|3852464_3852827_-	hypothetical protein	NA	A0A2H5BFY4	Vibrio_phage	38.3	1.9e-12
WP_004920997.1|3852826_3853483_-	hypothetical protein	NA	Q7Y5S7	Haemophilus_phage	50.7	2.1e-33
WP_040133272.1|3853479_3854304_-	hypothetical protein	NA	Q7Y5S8	Haemophilus_phage	48.4	8.5e-72
WP_014656229.1|3854278_3854617_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040133273.1|3854613_3855345_-	hypothetical protein	NA	Q7Y5T0	Haemophilus_phage	34.0	5.7e-27
WP_040133274.1|3855427_3857212_-	hypothetical protein	NA	D0UII2	Aggregatibacter_phage	32.6	2.4e-10
WP_014656233.1|3857356_3857749_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004921015.1|3857748_3858183_-	DUF3277 family protein	NA	NA	NA	NA	NA
WP_040133275.1|3858192_3859704_-	DUF3383 domain-containing protein	NA	Q7Y5T5	Haemophilus_phage	40.6	5.7e-98
