The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP006683	Melissococcus plutonius S1 chromosome, complete genome	1896191	637474	645938	1896191		Streptococcus_phage(66.67%)	9	NA	NA
WP_013773520.1|637474_638119_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	50.5	4.5e-52
WP_013773521.1|638137_638467_+	protein from nitrogen regulatory protein P-II (GLNB) family	NA	NA	NA	NA	NA
WP_013773522.1|638466_639435_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	31.7	8.3e-34
WP_013773523.1|639428_640265_+	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_013773524.1|640267_640615_+	DNA replication initiation control protein YabA	NA	NA	NA	NA	NA
WP_015695238.1|640718_641585_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	55.4	1.8e-80
WP_013773526.1|641784_642897_+	DNA polymerase IV	NA	D0R0A3	Streptococcus_phage	25.7	1.6e-12
WP_013773527.1|643095_643698_-	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	54.7	3.9e-50
WP_048665585.1|643745_645938_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	64.4	7.3e-280
>prophage 2
NZ_CP006683	Melissococcus plutonius S1 chromosome, complete genome	1896191	1127985	1232595	1896191	protease,portal,integrase,head,tail,terminase,bacteriocin,tRNA,capsid,plate,holin	Enterococcus_phage(14.29%)	117	1184112:1184146	1240391:1240425
WP_013773960.1|1127985_1129218_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	48.8	2.5e-43
WP_013773961.1|1129204_1129570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041363479.1|1129681_1130134_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013773963.1|1130828_1131704_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_048589807.1|1131729_1132758_+	3-deoxy-7-phosphoheptulonate synthase	NA	NA	NA	NA	NA
WP_013773965.1|1132760_1133834_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_013773966.1|1133835_1135002_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	34.6	6.0e-39
WP_048589819.1|1135129_1136413_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_013773968.1|1136428_1136938_+	shikimate kinase	NA	NA	NA	NA	NA
WP_013773969.1|1137204_1137447_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013773970.1|1137459_1139535_+	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_048589808.1|1139598_1141485_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	30.2	2.8e-54
WP_013773972.1|1141500_1142448_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	59.6	2.5e-107
WP_013773973.1|1142473_1142980_+	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	44.9	3.5e-28
WP_013773974.1|1143099_1143720_-	transcriptional repressor LexA	NA	A0A1B1P7Q3	Bacillus_phage	56.9	1.2e-14
WP_013773975.1|1143911_1144154_+	DUF896 family protein	NA	NA	NA	NA	NA
WP_013773976.1|1144249_1146244_+	transketolase	NA	NA	NA	NA	NA
WP_013773977.1|1146464_1147814_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_013773978.1|1148048_1148678_+	membrane protein	NA	NA	NA	NA	NA
WP_013773979.1|1149290_1150241_+	LCP family protein	NA	NA	NA	NA	NA
WP_013773980.1|1150221_1151397_+	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA	NA
WP_048589809.1|1151393_1152614_+	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA	NA
WP_013773982.1|1153195_1153753_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A096XT26	Enterococcus_phage	45.3	4.4e-32
WP_013773983.1|1154329_1154989_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013773984.1|1155135_1156590_-	YfcC family protein	NA	NA	NA	NA	NA
WP_013773985.1|1156801_1157764_-	carbamate kinase	NA	NA	NA	NA	NA
WP_013773986.1|1157786_1158809_-	ornithine carbamoyltransferase	NA	M1I6M4	Paramecium_bursaria_Chlorella_virus	25.0	1.8e-15
WP_013773987.1|1158830_1160054_-	arginine deiminase	NA	NA	NA	NA	NA
WP_048589820.1|1160671_1162711_-	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_013773989.1|1162741_1163581_-	PRD domain-containing protein	NA	NA	NA	NA	NA
WP_013773990.1|1164427_1164769_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA	NA
WP_048589821.1|1165049_1165391_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589822.1|1166611_1167073_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589823.1|1167062_1167740_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589824.1|1168440_1168797_-	DUF2335 domain-containing protein	NA	S5WJ01	Leptospira_phage	33.7	5.0e-05
WP_048589825.1|1168873_1169113_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589826.1|1169476_1170112_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589827.1|1170865_1171846_-	hypothetical protein	NA	F0PIJ7	Enterococcus_phage	48.6	3.7e-50
WP_048589828.1|1171871_1172069_-|holin	holin	holin	A0A1P8BL51	Lactococcus_phage	44.4	1.5e-11
WP_048589829.1|1172083_1172290_-	hypothetical protein	NA	A0A0S2MYG0	Enterococcus_phage	56.1	1.0e-13
WP_048589830.1|1172328_1172475_-	XkdX family protein	NA	A0A2H4J2R9	uncultured_Caudovirales_phage	51.2	6.4e-07
WP_048589831.1|1172464_1172797_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589832.1|1172811_1173273_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053078823.1|1173272_1173962_-|plate	phage baseplate upper protein	plate	A0A1J0MFQ3	Staphylococcus_phage	39.6	3.3e-37
WP_048589833.1|1173951_1174200_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589834.1|1174183_1174393_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589835.1|1174379_1175558_-	hypothetical protein	NA	A0A0M7RDS2	Lactobacillus_phage	28.8	3.3e-37
WP_160171416.1|1175570_1176323_-|tail	phage tail family protein	tail	A0A060AFE1	Staphylococcus_phage	31.8	2.1e-21
WP_048589837.1|1176406_1178032_-	transglycosylase SLT domain-containing protein	NA	Q8LTK2	Lactococcus_phage	49.1	1.4e-78
WP_048593187.1|1178054_1181447_-	hypothetical protein	NA	E9LUR1	Lactobacillus_phage	42.4	6.6e-94
WP_048589840.1|1181669_1181999_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053078824.1|1182010_1182298_-	collagen-like protein	NA	NA	NA	NA	NA
WP_048589841.1|1182314_1182935_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589842.1|1182934_1183321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589843.1|1183310_1183739_-	hypothetical protein	NA	A0A0M7RDL2	Lactobacillus_phage	29.5	1.9e-06
WP_048589844.1|1183731_1184076_-|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_048589845.1|1184035_1184437_-|head,tail	phage gp6-like head-tail connector protein	head,tail	E9LUQ4	Lactobacillus_phage	50.0	1.1e-16
1184112:1184146	attL	AGTTGTCCAATAATAGATGTACTTATTACATCAAC	NA	NA	NA	NA
WP_053078825.1|1184472_1185630_-|capsid	phage major capsid protein	capsid	U3PBL1	Staphylococcus_phage	47.7	1.2e-66
WP_080719101.1|1185632_1186238_-|head,protease	HK97 family phage prohead protease	head,protease	A0A0M4R4P2	Enterococcus_phage	45.1	4.0e-34
WP_048589846.1|1186131_1187355_-|portal	phage portal protein	portal	E3W8F3	Leuconostoc_phage	35.0	3.1e-46
WP_048589847.1|1187357_1187558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053078826.1|1187558_1189019_-|terminase	terminase large subunit	terminase	Q9XJ75	Streptococcus_virus	48.3	3.3e-127
WP_053078827.1|1189064_1189382_-	hypothetical protein	NA	A0A286QRG1	Streptococcus_phage	56.1	1.2e-26
WP_048589848.1|1189378_1189846_-|terminase	phage terminase small subunit P27 family	terminase	E3W8E9	Leuconostoc_phage	31.8	1.7e-08
WP_160171417.1|1189898_1190423_-	HNH endonuclease	NA	Q9AZT3	Lactococcus_phage	39.5	3.2e-24
WP_160171418.1|1190548_1190719_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589850.1|1191435_1192125_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013774291.1|1192438_1192858_-	transcriptional regulator	NA	E9LUP5	Lactobacillus_phage	46.0	1.8e-22
WP_013774292.1|1192871_1193138_-	hypothetical protein	NA	A0A249XZT5	Enterococcus_phage	61.6	2.8e-24
WP_013774293.1|1193127_1193514_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013774294.1|1193514_1193715_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589851.1|1193941_1194358_-	RusA family crossover junction endodeoxyribonuclease	NA	S6B1L9	Thermus_phage	53.8	5.7e-32
WP_048589852.1|1194376_1194874_-	single-stranded DNA-binding protein	NA	A0A2I2MUI5	uncultured_Caudovirales_phage	74.8	3.8e-43
WP_048589853.1|1194870_1195431_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589854.1|1195448_1196306_-	hypothetical protein	NA	A0A2H4J2I9	uncultured_Caudovirales_phage	54.5	8.9e-32
WP_048589855.1|1196309_1196996_-	hypothetical protein	NA	C9E2N1	Enterococcus_phage	65.6	3.9e-86
WP_053078828.1|1196985_1197600_-	ERF family protein	NA	Q6JM07	Lactococcus_phage	68.5	7.3e-44
WP_048589857.1|1197629_1198100_-	siphovirus Gp157 family protein	NA	A0A1J0MFN6	Staphylococcus_phage	46.0	9.2e-31
WP_127515679.1|1198099_1198405_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589859.1|1198549_1198993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048589860.1|1198960_1199194_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155522196.1|1199247_1199388_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162836836.1|1199394_1199532_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589861.1|1199565_1199841_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589862.1|1199935_1200439_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048589864.1|1200625_1201150_-	hypothetical protein	NA	A0A0S2MYI3	Enterococcus_phage	45.4	1.6e-20
WP_048589865.1|1201230_1201569_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048589866.1|1201558_1201753_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589867.1|1201887_1202133_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589868.1|1202144_1202900_-	antirepressor	NA	L0P8P6	Lactobacillus_phage	57.0	8.0e-77
WP_048589869.1|1202916_1203156_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589900.1|1203279_1204047_+	helix-turn-helix transcriptional regulator	NA	Q9G039	Staphylococcus_virus	39.8	2.8e-37
WP_048589870.1|1204151_1204898_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064429785.1|1204987_1205356_-	DUF2829 domain-containing protein	NA	NA	NA	NA	NA
WP_048589871.1|1205403_1206153_-	Rha family transcriptional regulator	NA	A0A0K2CZD5	Paenibacillus_phage	40.7	5.8e-43
WP_162836837.1|1206176_1206350_-	hypothetical protein	NA	D7RWL9	Brochothrix_phage	43.9	4.2e-05
WP_048589872.1|1206540_1206747_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_048589873.1|1206843_1207326_+	helix-turn-helix transcriptional regulator	NA	Q9AZH9	Lactococcus_phage	31.6	3.2e-10
WP_048589874.1|1207487_1208633_+|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	38.7	1.7e-70
WP_013773992.1|1209923_1210553_-|bacteriocin	putative bacteriocin export ABC transporter	bacteriocin	G9BWD6	Planktothrix_phage	32.7	9.8e-20
WP_041363481.1|1210555_1210960_-	DUF1430 domain-containing protein	NA	NA	NA	NA	NA
WP_048589875.1|1210956_1212276_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015694914.1|1212389_1212596_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589876.1|1213726_1215067_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_013773999.1|1215244_1216183_-	DUF1803 domain-containing protein	NA	NA	NA	NA	NA
WP_013774000.1|1216436_1217363_-	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_013774001.1|1217454_1218219_-	pyruvate formate lyase-activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	30.6	6.5e-26
WP_048589877.1|1218357_1220604_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	41.4	2.5e-166
WP_013774003.1|1220815_1223257_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	33.3	4.6e-97
WP_013774004.1|1223268_1225329_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	40.6	1.1e-115
WP_013774005.1|1225662_1226292_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_013774006.1|1226490_1227366_-	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_048589878.1|1227380_1228169_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_041363545.1|1228186_1229593_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A173GFL6	Erwinia_phage	27.2	4.6e-41
WP_013774008.1|1229608_1230157_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_013774009.1|1230192_1231092_-	tyrosine recombinase XerC	NA	S5W9T9	Leptospira_phage	28.5	1.3e-20
WP_013774010.1|1231284_1232595_-|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
1240391:1240425	attR	GTTGATGTAATAAGTACATCTATTATTGGACAACT	NA	NA	NA	NA
>prophage 3
NZ_CP006683	Melissococcus plutonius S1 chromosome, complete genome	1896191	1529228	1569837	1896191	tail,plate,holin	Lactococcus_phage(26.67%)	39	NA	NA
WP_126347290.1|1529228_1529993_-|holin	holin	holin	A0A1S5S9Z7	Streptococcus_phage	51.1	2.7e-40
WP_013774334.1|1530058_1530253_-|holin	holin	holin	A0A1P8BL51	Lactococcus_phage	35.5	1.2e-05
WP_013774335.1|1530267_1530474_-	hypothetical protein	NA	A0A0S2MYG0	Enterococcus_phage	59.1	2.6e-14
WP_013774336.1|1530817_1531132_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013774337.1|1531148_1531364_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013774338.1|1531363_1531606_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013774339.1|1531608_1532226_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048589943.1|1532218_1533193_-|plate	phage baseplate upper protein	plate	Q9AZX4	Lactococcus_phage	35.3	4.4e-35
WP_013774343.1|1535887_1536646_-	hypothetical protein	NA	D7RWD9	Brochothrix_phage	42.5	2.4e-52
WP_013774344.1|1536660_1538544_-|tail	tail protein	tail	A0A1L2JXP6	Streptococcus_phage	29.2	9.2e-21
WP_041363491.1|1538559_1538883_-	hypothetical protein	NA	A0A1P8BLR3	Lactococcus_phage	52.9	3.2e-22
WP_013774346.1|1538900_1539248_-	hypothetical protein	NA	Q77RZ7	Lactococcus_phage	51.0	2.1e-24
WP_048589944.1|1539288_1539804_-|tail	phage major tail protein, TP901-1 family	tail	D7RWD5	Brochothrix_phage	59.5	6.1e-52
WP_015694703.1|1539804_1540206_-	hypothetical protein	NA	C9E2J9	Enterococcus_phage	49.2	1.4e-27
WP_013774349.1|1540361_1540868_-	DUF4355 domain-containing protein	NA	NA	NA	NA	NA
WP_013774350.1|1541006_1541168_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013774353.1|1545588_1545882_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041363226.1|1546017_1546200_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013774356.1|1547142_1547853_+	helix-turn-helix transcriptional regulator	NA	E8ZDN4	Streptococcus_phage	38.6	8.8e-33
WP_048589945.1|1548216_1548927_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013774358.1|1549449_1549824_-	reactive intermediate/imine deaminase	NA	NA	NA	NA	NA
WP_013774359.1|1550112_1550895_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.1	3.8e-13
WP_013774360.1|1550894_1551626_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_048589946.1|1551606_1551918_-	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_048589947.1|1551918_1552641_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_013774363.1|1552630_1553632_-	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	28.3	1.2e-22
WP_013774364.1|1553645_1554611_-	iron-siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_013774369.1|1557693_1557954_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_013774370.1|1557922_1558381_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	27.3	3.9e-10
WP_048589948.1|1558402_1558786_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013774372.1|1558967_1559612_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	50.5	1.3e-43
WP_048589949.1|1559608_1560325_+	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	NA	NA	NA	NA
WP_013774375.1|1561146_1561731_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013774376.1|1561857_1562424_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013774377.1|1562801_1563227_-	YxeA family protein	NA	NA	NA	NA	NA
WP_013774378.1|1563907_1564711_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_013774381.1|1566668_1567112_+	acetyltransferase	NA	NA	NA	NA	NA
WP_013774382.1|1567314_1567980_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_013774385.1|1569693_1569837_-|holin	putative holin-like toxin	holin	NA	NA	NA	NA
