assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000747525.1_ASM74752v1	NZ_CP009278	Sphingobacterium sp. ML3W chromosome, complete genome	1	1210928-1211034	1	CRISPRCasFinder	no		c2c10_CAS-V-U3,cas3,WYL,PD-DExK,DEDDh,csa3,RT,DinG	Orphan	GATAATCATCCATACTTATCTATAGT	26	0	0	NA	NA	NA	1	1	Orphan	c2c10_CAS-V-U3,cas3,WYL,PD-DExK,DEDDh,csa3,RT,DinG	NA,NA|64aa|down_1|NZ_CP009278.1_1219472_1219664_+	NA|397aa|up_9|NZ_CP009278.1_1197933_1199124_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|354aa|up_8|NZ_CP009278.1_1199130_1200192_+	cd17552, REC_RR468-like, phosphoacceptor receiver (REC) domain of Thermotoga maritima response regulator RR468 and similar domains	NA|138aa|up_7|NZ_CP009278.1_1200388_1200802_+	cd12183, LDH_like_2, D-Lactate and related Dehydrogenases, NAD-binding and catalytic domains	NA|459aa|up_6|NZ_CP009278.1_1200806_1202183_+	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|796aa|up_5|NZ_CP009278.1_1202192_1204580_+	cd07553, P-type_ATPase_HM, P-type heavy metal-transporting ATPase; uncharacterized subfamily	NA|59aa|up_4|NZ_CP009278.1_1204605_1204782_+	pfam03597, FixS, Cytochrome oxidase maturation protein cbb3-type	NA|292aa|up_3|NZ_CP009278.1_1204801_1205677_-	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism]	NA|728aa|up_2|NZ_CP009278.1_1205790_1207974_-	cd06201, SiR_like2, Cytochrome p450- like alpha subunits of E	NA|162aa|up_1|NZ_CP009278.1_1207980_1208466_-	pfam10029, DUF2271, Predicted periplasmic protein (DUF2271)	NA|503aa|up_0|NZ_CP009278.1_1208470_1209979_-	PHA03095, PHA03095, ankyrin-like protein; Provisional	NA|713aa|down_0|NZ_CP009278.1_1217319_1219458_+	PRK14485, PRK14485, putative bifunctional cbb3-type cytochrome c oxidase subunit I/II; Provisional	NA|64aa|down_1|NZ_CP009278.1_1219472_1219664_+	NA	NA|290aa|down_2|NZ_CP009278.1_1219666_1220536_+	TIGR00782, di-heme_cytochrome_cp, cytochrome c oxidase, cbb3-type, subunit III	NA|461aa|down_3|NZ_CP009278.1_1220547_1221930_+	TIGR02745, iron-sulfur_cluster-binding_protein, cytochrome c oxidase accessory protein FixG	NA|141aa|down_4|NZ_CP009278.1_1221961_1222384_+	pfam05751, FixH, FixH	NA|233aa|down_5|NZ_CP009278.1_1222385_1223084_+	pfam13386, DsbD_2, Cytochrome C biogenesis protein transmembrane region	NA|485aa|down_6|NZ_CP009278.1_1223076_1224531_-	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|1052aa|down_7|NZ_CP009278.1_1224540_1227696_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|387aa|down_8|NZ_CP009278.1_1227730_1228891_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|492aa|down_9|NZ_CP009278.1_1229148_1230624_+	PRK01642, cls, cardiolipin synthetase; Reviewed
GCF_000747525.1_ASM74752v1	NZ_CP009278	Sphingobacterium sp. ML3W chromosome, complete genome	2	2282632-2282760	2	CRISPRCasFinder	no		c2c10_CAS-V-U3,cas3,WYL,PD-DExK,DEDDh,csa3,RT,DinG	Orphan	TCTTTTCAAAAACCCCTAGCTCCGAAGAGCTAGAGGAGT	39	0	0	NA	NA	NA	1	1	Orphan	c2c10_CAS-V-U3,cas3,WYL,PD-DExK,DEDDh,csa3,RT,DinG	NA|1275aa|up_8|NZ_CP009278.1_2268925_2272750_-,NA|207aa|up_5|NZ_CP009278.1_2273667_2274288_-,NA|233aa|up_4|NZ_CP009278.1_2275275_2275974_+,NA|76aa|up_0|NZ_CP009278.1_2282142_2282370_-,NA|130aa|down_1|NZ_CP009278.1_2283966_2284356_-,NA|334aa|down_2|NZ_CP009278.1_2284821_2285823_+,NA|224aa|down_4|NZ_CP009278.1_2286721_2287393_+,NA|94aa|down_5|NZ_CP009278.1_2287748_2288030_+,NA|149aa|down_6|NZ_CP009278.1_2288041_2288488_+,NA|109aa|down_7|NZ_CP009278.1_2288913_2289240_+,NA|190aa|down_9|NZ_CP009278.1_2290732_2291302_-	NA|1046aa|up_9|NZ_CP009278.1_2265725_2268863_+	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]	NA|1275aa|up_8|NZ_CP009278.1_2268925_2272750_-	NA	NA|87aa|up_7|NZ_CP009278.1_2272865_2273126_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|86aa|up_6|NZ_CP009278.1_2273375_2273633_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|207aa|up_5|NZ_CP009278.1_2273667_2274288_-	NA	NA|233aa|up_4|NZ_CP009278.1_2275275_2275974_+	NA	NA|1115aa|up_3|NZ_CP009278.1_2276071_2279416_+	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|453aa|up_2|NZ_CP009278.1_2279426_2280785_+	cd08977, SusD, starch binding outer membrane protein SusD	NA|418aa|up_1|NZ_CP009278.1_2280810_2282064_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|76aa|up_0|NZ_CP009278.1_2282142_2282370_-	NA	NA|296aa|down_0|NZ_CP009278.1_2282867_2283755_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|130aa|down_1|NZ_CP009278.1_2283966_2284356_-	NA	NA|334aa|down_2|NZ_CP009278.1_2284821_2285823_+	NA	NA|124aa|down_3|NZ_CP009278.1_2285921_2286293_+	cd04762, HTH_MerR-trunc, Helix-Turn-Helix DNA binding domain of truncated MerR-like proteins	NA|224aa|down_4|NZ_CP009278.1_2286721_2287393_+	NA	NA|94aa|down_5|NZ_CP009278.1_2287748_2288030_+	NA	NA|149aa|down_6|NZ_CP009278.1_2288041_2288488_+	NA	NA|109aa|down_7|NZ_CP009278.1_2288913_2289240_+	NA	NA|318aa|down_8|NZ_CP009278.1_2289779_2290733_-	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system	NA|190aa|down_9|NZ_CP009278.1_2290732_2291302_-	NA
GCF_000747525.1_ASM74752v1	NZ_CP009278	Sphingobacterium sp. ML3W chromosome, complete genome	3	4967235-4967305	3	CRISPRCasFinder	no		c2c10_CAS-V-U3,cas3,WYL,PD-DExK,DEDDh,csa3,RT,DinG	Orphan	ACGATCAGTCTAACTTACTCACC	23	0	0	NA	NA	NA	1	1	Orphan	c2c10_CAS-V-U3,cas3,WYL,PD-DExK,DEDDh,csa3,RT,DinG	NA|242aa|up_9|NZ_CP009278.1_4953546_4954272_+,NA|85aa|up_7|NZ_CP009278.1_4955757_4956012_+,NA|130aa|down_0|NZ_CP009278.1_4967617_4968007_-,NA|177aa|down_1|NZ_CP009278.1_4968120_4968651_-,NA|137aa|down_2|NZ_CP009278.1_4969977_4970388_+,NA|124aa|down_5|NZ_CP009278.1_4972672_4973044_+	NA|242aa|up_9|NZ_CP009278.1_4953546_4954272_+	NA	NA|340aa|up_8|NZ_CP009278.1_4954268_4955288_+	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system	NA|85aa|up_7|NZ_CP009278.1_4955757_4956012_+	NA	NA|211aa|up_6|NZ_CP009278.1_4956482_4957115_+	TIGR02985, Sig70_bacteroi1, RNA polymerase sigma-70 factor, Bacteroides expansion family 1	NA|299aa|up_5|NZ_CP009278.1_4957237_4958134_+	pfam04773, FecR, FecR protein	NA|83aa|up_4|NZ_CP009278.1_4958191_4958440_+	pfam16344, DUF4974, Domain of unknown function (DUF4974)	NA|1247aa|up_3|NZ_CP009278.1_4958559_4962300_+	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|487aa|up_2|NZ_CP009278.1_4962311_4963772_+	cd08977, SusD, starch binding outer membrane protein SusD	NA|682aa|up_1|NZ_CP009278.1_4963762_4965808_+	pfam00930, DPPIV_N, Dipeptidyl peptidase IV (DPP IV) N-terminal region	NA|386aa|up_0|NZ_CP009278.1_4965818_4966976_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|130aa|down_0|NZ_CP009278.1_4967617_4968007_-	NA	NA|177aa|down_1|NZ_CP009278.1_4968120_4968651_-	NA	NA|137aa|down_2|NZ_CP009278.1_4969977_4970388_+	NA	NA|105aa|down_3|NZ_CP009278.1_4971822_4972137_+	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|175aa|down_4|NZ_CP009278.1_4972121_4972646_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|124aa|down_5|NZ_CP009278.1_4972672_4973044_+	NA	NA|58aa|down_6|NZ_CP009278.1_4973106_4973280_+	pfam13276, HTH_21, HTH-like domain	NA|70aa|down_7|NZ_CP009278.1_4974034_4974244_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|139aa|down_8|NZ_CP009278.1_4974632_4975049_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|415aa|down_9|NZ_CP009278.1_4975460_4976705_+	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]
GCF_000747525.1_ASM74752v1	NZ_CP009278	Sphingobacterium sp. ML3W chromosome, complete genome	4	5146180-5146329	4	CRISPRCasFinder	no	DEDDh	c2c10_CAS-V-U3,cas3,WYL,PD-DExK,DEDDh,csa3,RT,DinG	Unclear	TAGTAGTAACACAGTAACAACAGTGACGCAGTAACATT	38	0	0	NA	NA	NA	1	1	Orphan	c2c10_CAS-V-U3,cas3,WYL,PD-DExK,DEDDh,csa3,RT,DinG	NA|294aa|up_9|NZ_CP009278.1_5135313_5136195_-,NA|159aa|down_1|NZ_CP009278.1_5147569_5148046_-	NA|294aa|up_9|NZ_CP009278.1_5135313_5136195_-	NA	NA|483aa|up_8|NZ_CP009278.1_5136194_5137643_-	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|170aa|up_7|NZ_CP009278.1_5137639_5138149_-	cd01630, HAD_KDO-like, haloacid dehalogenase-like (HAD) hydrolase, similar to Escherichia coli 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) phosphatase KdsC, and rainbow trout N-acylneuraminate cytidylyltransferase	NA|348aa|up_6|NZ_CP009278.1_5138157_5139201_-	TIGR03569, ORF_8_similar_to_NeuB_family, N-acetylneuraminate synthase	NA|246aa|up_5|NZ_CP009278.1_5139206_5139944_-	cd02518, GT2_SpsF, SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat	NA|357aa|up_4|NZ_CP009278.1_5139950_5141021_-	pfam02706, Wzz, Chain length determinant protein	NA|839aa|up_3|NZ_CP009278.1_5141032_5143549_-	COG1596, Wza, Periplasmic protein involved in polysaccharide export, contains    SLBB domain of b-grasp fold [Cell wall/membrane/envelope biogenesis]	NA|287aa|up_2|NZ_CP009278.1_5143583_5144444_-	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form	NA|290aa|up_1|NZ_CP009278.1_5144694_5145564_-	pfam04321, RmlD_sub_bind, RmlD substrate binding domain	NA|187aa|up_0|NZ_CP009278.1_5145550_5146111_-	pfam00908, dTDP_sugar_isom, dTDP-4-dehydrorhamnose 3,5-epimerase	NA|354aa|down_0|NZ_CP009278.1_5146355_5147417_-	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]	NA|159aa|down_1|NZ_CP009278.1_5147569_5148046_-	NA	NA|333aa|down_2|NZ_CP009278.1_5148523_5149522_-	COG0836, {ManC}, Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]	NA|142aa|down_3|NZ_CP009278.1_5149747_5150173_-	cd02171, G3P_Cytidylyltransferase, glycerol-3-phosphate cytidylyltransferase	NA|141aa|down_4|NZ_CP009278.1_5150272_5150695_-	PTZ00308, PTZ00308, ethanolamine-phosphate cytidylyltransferase; Provisional	NA|302aa|down_5|NZ_CP009278.1_5151127_5152033_+	pfam17127, DUF5106, Domain of unknown function (DUF5106)	NA|151aa|down_6|NZ_CP009278.1_5152046_5152499_+	cd06462, Peptidase_S24_S26, The S24, S26 LexA/signal peptidase superfamily contains LexA-related and type I signal peptidase families	NA|90aa|down_7|NZ_CP009278.1_5152563_5152833_+	pfam05402, PqqD, Coenzyme PQQ synthesis protein D (PqqD)	NA|544aa|down_8|NZ_CP009278.1_5152857_5154489_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|306aa|down_9|NZ_CP009278.1_5154501_5155419_+	TIGR04249, SCM_chp_ScmC, SynChlorMet cassette protein ScmC
GCF_000747525.1_ASM74752v1	NZ_CP009278	Sphingobacterium sp. ML3W chromosome, complete genome	5	5156975-5157059	5	CRISPRCasFinder	no	DEDDh	c2c10_CAS-V-U3,cas3,WYL,PD-DExK,DEDDh,csa3,RT,DinG	Unclear	TAATCTGTTCTTTAATGGTCATTCATGC	28	0	0	NA	NA	NA	1	1	Orphan	c2c10_CAS-V-U3,cas3,WYL,PD-DExK,DEDDh,csa3,RT,DinG	NA|159aa|up_9|NZ_CP009278.1_5147569_5148046_-,NA|179aa|down_1|NZ_CP009278.1_5158912_5159449_-	NA|159aa|up_9|NZ_CP009278.1_5147569_5148046_-	NA	NA|333aa|up_8|NZ_CP009278.1_5148523_5149522_-	COG0836, {ManC}, Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]	NA|142aa|up_7|NZ_CP009278.1_5149747_5150173_-	cd02171, G3P_Cytidylyltransferase, glycerol-3-phosphate cytidylyltransferase	NA|141aa|up_6|NZ_CP009278.1_5150272_5150695_-	PTZ00308, PTZ00308, ethanolamine-phosphate cytidylyltransferase; Provisional	NA|302aa|up_5|NZ_CP009278.1_5151127_5152033_+	pfam17127, DUF5106, Domain of unknown function (DUF5106)	NA|151aa|up_4|NZ_CP009278.1_5152046_5152499_+	cd06462, Peptidase_S24_S26, The S24, S26 LexA/signal peptidase superfamily contains LexA-related and type I signal peptidase families	NA|90aa|up_3|NZ_CP009278.1_5152563_5152833_+	pfam05402, PqqD, Coenzyme PQQ synthesis protein D (PqqD)	NA|544aa|up_2|NZ_CP009278.1_5152857_5154489_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|306aa|up_1|NZ_CP009278.1_5154501_5155419_+	TIGR04249, SCM_chp_ScmC, SynChlorMet cassette protein ScmC	NA|505aa|up_0|NZ_CP009278.1_5155454_5156969_-	cd07561, Peptidase_S41_CPP_like, C-terminal processing peptidase-like; serine protease family S41	NA|392aa|down_0|NZ_CP009278.1_5157323_5158499_+	pfam14294, DUF4372, Domain of unknown function (DUF4372)	NA|179aa|down_1|NZ_CP009278.1_5158912_5159449_-	NA	DEDDh|176aa|down_2|NZ_CP009278.1_5160005_5160533_-	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III	NA|436aa|down_3|NZ_CP009278.1_5160684_5161992_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|526aa|down_4|NZ_CP009278.1_5162213_5163791_+	pfam12954, DUF3843, Protein of unknown function (DUF3843)	NA|475aa|down_5|NZ_CP009278.1_5163952_5165377_-	cd16145, ARS_like, uncharacterized arylsulfatase subfamily	NA|368aa|down_6|NZ_CP009278.1_5165646_5166750_+	sd00006, TPR, Tetratricopeptide repeat	NA|246aa|down_7|NZ_CP009278.1_5166809_5167547_-	pfam01738, DLH, Dienelactone hydrolase family	NA|707aa|down_8|NZ_CP009278.1_5167771_5169892_+	PRK11186, PRK11186, carboxy terminal-processing peptidase	NA|570aa|down_9|NZ_CP009278.1_5169971_5171681_-	pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain
