assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000746525.1_ASM74652v1	NZ_CP009048	Pseudomonas alkylphenolica strain KL28 chromosome, complete genome	1	827805-827903	1	CRISPRCasFinder	no		WYL,DEDDh,RT,cas3,csa3,DinG	Orphan	CGCAGGTCGAGGCCGCGCAAATCG	24	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,RT,cas3,csa3,DinG	NA|59aa|up_6|NZ_CP009048.1_822739_822916_-,NA	NA|463aa|up_9|NZ_CP009048.1_816246_817635_-	TIGR01942, pcnB, poly(A) polymerase	NA|480aa|up_8|NZ_CP009048.1_818339_819779_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|985aa|up_7|NZ_CP009048.1_819801_822756_-	COG0591, PutP, Na+/proline symporter [Amino acid transport and metabolism / General function prediction only]	NA|59aa|up_6|NZ_CP009048.1_822739_822916_-	NA	NA|296aa|up_5|NZ_CP009048.1_823148_824036_-	PRK05710, PRK05710, tRNA glutamyl-Q(34) synthetase GluQRS	NA|148aa|up_4|NZ_CP009048.1_824114_824558_-	PRK10778, dksA, RNA polymerase-binding protein DksA	NA|391aa|up_3|NZ_CP009048.1_824768_825941_+	PRK08960, PRK08960, pyridoxal phosphate-dependent aminotransferase	NA|238aa|up_2|NZ_CP009048.1_825940_826654_+	PRK00347, PRK00347, DNA/RNA nuclease SfsA	NA|106aa|up_1|NZ_CP009048.1_826643_826961_-	COG2146, {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases [Inorganic ion transport and metabolism / General function prediction only]	NA|91aa|up_0|NZ_CP009048.1_827190_827463_-	pfam04994, TfoX_C, TfoX C-terminal domain	NA|521aa|down_0|NZ_CP009048.1_828121_829684_-	COG2187, COG2187, Uncharacterized protein conserved in bacteria [Function unknown]	NA|774aa|down_1|NZ_CP009048.1_829802_832124_+	TIGR02071, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1B	NA|252aa|down_2|NZ_CP009048.1_832140_832896_+	sd00006, TPR, Tetratricopeptide repeat	NA|110aa|down_3|NZ_CP009048.1_832895_833225_+	pfam04287, DUF446, tRNA pseudouridine synthase C	NA|575aa|down_4|NZ_CP009048.1_833647_835372_+	PRK06466, PRK06466, acetolactate synthase 3 large subunit	NA|164aa|down_5|NZ_CP009048.1_835374_835866_+	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed	NA|339aa|down_6|NZ_CP009048.1_835917_836934_+	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|286aa|down_7|NZ_CP009048.1_837080_837938_+	COG1183, PssA, Phosphatidylserine synthase [Lipid metabolism]	NA|338aa|down_8|NZ_CP009048.1_838000_839014_+	PRK05363, PRK05363, protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA|207aa|down_9|NZ_CP009048.1_839013_839634_+	PRK05419, PRK05419, protein-methionine-sulfoxide reductase heme-binding subunit MsrQ
GCF_000746525.1_ASM74652v1	NZ_CP009048	Pseudomonas alkylphenolica strain KL28 chromosome, complete genome	2	2728269-2728431	2	CRISPRCasFinder	no		WYL,DEDDh,RT,cas3,csa3,DinG	Orphan	AATAAGTTGGTGGTTAACACCGCGGAGGTCTATCCAACAGCGGGCAAAGGTA	52	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,RT,cas3,csa3,DinG	NA|103aa|up_8|NZ_CP009048.1_2716953_2717262_-,NA	NA|542aa|up_9|NZ_CP009048.1_2715238_2716864_+	pfam00924, MS_channel, Mechanosensitive ion channel	NA|103aa|up_8|NZ_CP009048.1_2716953_2717262_-	NA	NA|757aa|up_7|NZ_CP009048.1_2717710_2719981_+	sd00006, TPR, Tetratricopeptide repeat	NA|434aa|up_6|NZ_CP009048.1_2720041_2721343_-	pfam03349, Toluene_X, Outer membrane protein transport protein (OMPP1/FadL/TodX)	NA|325aa|up_5|NZ_CP009048.1_2721493_2722468_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|315aa|up_4|NZ_CP009048.1_2722472_2723417_+	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|169aa|up_3|NZ_CP009048.1_2723413_2723920_+	pfam14316, DUF4381, Domain of unknown function (DUF4381)	NA|334aa|up_2|NZ_CP009048.1_2723906_2724908_+	cd01467, vWA_BatA_type, VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|532aa|up_1|NZ_CP009048.1_2724909_2726505_+	cd01467, vWA_BatA_type, VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|435aa|up_0|NZ_CP009048.1_2726501_2727806_+	pfam13584, BatD, Oxygen tolerance	NA|334aa|down_0|NZ_CP009048.1_2729187_2730189_+	pfam12710, HAD, haloacid dehalogenase-like hydrolase	NA|522aa|down_1|NZ_CP009048.1_2730289_2731855_+	cd16142, ARS_like, uncharacterized arylsulfatase subfamily	NA|845aa|down_2|NZ_CP009048.1_2731986_2734521_+	COG0421, SpeE, Spermidine synthase [Amino acid transport and metabolism]	NA|636aa|down_3|NZ_CP009048.1_2734614_2736522_+	COG3284, AcoR, Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription]	NA|578aa|down_4|NZ_CP009048.1_2736532_2738266_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|227aa|down_5|NZ_CP009048.1_2738255_2738936_+	cd07492, Peptidases_S8_8, Peptidase S8 family domain, uncharacterized subfamily 8	NA|431aa|down_6|NZ_CP009048.1_2738928_2740221_+	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion]	NA|498aa|down_7|NZ_CP009048.1_2740310_2741804_-	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins	NA|523aa|down_8|NZ_CP009048.1_2742129_2743698_+	TIGR03908, QH_alpha, quinohemoprotein amine dehydrogenase, alpha subunit	NA|477aa|down_9|NZ_CP009048.1_2743771_2745202_+	TIGR03906, quino_hemo_SAM, quinohemoprotein amine dehydrogenase maturation protein
GCF_000746525.1_ASM74652v1	NZ_CP009048	Pseudomonas alkylphenolica strain KL28 chromosome, complete genome	3	2743889-2743994	3	CRISPRCasFinder	no		WYL,DEDDh,RT,cas3,csa3,DinG	Orphan	GGAATCATCGACACCTTGCGCGAGC	25	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,RT,cas3,csa3,DinG	NA|272aa|up_9|NZ_CP009048.1_2727959_2728775_+,NA|206aa|down_3|NZ_CP009048.1_2748863_2749481_+	NA|272aa|up_9|NZ_CP009048.1_2727959_2728775_+	NA	NA|334aa|up_8|NZ_CP009048.1_2729187_2730189_+	pfam12710, HAD, haloacid dehalogenase-like hydrolase	NA|522aa|up_7|NZ_CP009048.1_2730289_2731855_+	cd16142, ARS_like, uncharacterized arylsulfatase subfamily	NA|845aa|up_6|NZ_CP009048.1_2731986_2734521_+	COG0421, SpeE, Spermidine synthase [Amino acid transport and metabolism]	NA|636aa|up_5|NZ_CP009048.1_2734614_2736522_+	COG3284, AcoR, Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription]	NA|578aa|up_4|NZ_CP009048.1_2736532_2738266_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|227aa|up_3|NZ_CP009048.1_2738255_2738936_+	cd07492, Peptidases_S8_8, Peptidase S8 family domain, uncharacterized subfamily 8	NA|431aa|up_2|NZ_CP009048.1_2738928_2740221_+	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion]	NA|498aa|up_1|NZ_CP009048.1_2740310_2741804_-	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins	NA|523aa|up_0|NZ_CP009048.1_2742129_2743698_+	TIGR03908, QH_alpha, quinohemoprotein amine dehydrogenase, alpha subunit	NA|108aa|down_0|NZ_CP009048.1_2745203_2745527_+	pfam08992, QH-AmDH_gamma, Quinohemoprotein amine dehydrogenase, gamma subunit	NA|375aa|down_1|NZ_CP009048.1_2745558_2746683_+	TIGR03907, QH_beta, quinohemoprotein amine dehydrogenase, beta subunit	NA|557aa|down_2|NZ_CP009048.1_2746749_2748420_+	PRK08315, PRK08315, AMP-binding domain protein; Validated	NA|206aa|down_3|NZ_CP009048.1_2748863_2749481_+	NA	NA|421aa|down_4|NZ_CP009048.1_2750074_2751337_-	pfam03573, OprD, outer membrane porin, OprD family	NA|240aa|down_5|NZ_CP009048.1_2751367_2752087_-	cd02136, PnbA_NfnB-like, nitroreductase similar to Mycobacterium smegmatis NfnB	NA|448aa|down_6|NZ_CP009048.1_2752127_2753471_-	TIGR00895, transport_protein, benzoate transport	NA|348aa|down_7|NZ_CP009048.1_2753680_2754724_-	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|527aa|down_8|NZ_CP009048.1_2754926_2756507_-	pfam01471, PG_binding_1, Putative peptidoglycan binding domain	NA|147aa|down_9|NZ_CP009048.1_2756618_2757059_-	pfam07885, Ion_trans_2, Ion channel
