assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000737615.1_ASM73761v1	NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	1	759524-759609	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CAATGCGAGTTGGGGTGGGGCCCCAACA	28	1	1	759552-759581	NZ_CP006630.1_800623-800594	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|69aa|up_9|NZ_CP006630.1_746367_746574_+,NA|34aa|down_1|NZ_CP006630.1_761052_761154_+,NA|52aa|down_8|NZ_CP006630.1_769318_769474_+	NA|69aa|up_9|NZ_CP006630.1_746367_746574_+	NA	NA|237aa|up_8|NZ_CP006630.1_746670_747381_+	COG2049, DUR1, Allophanate hydrolase subunit 1 [Amino acid transport and metabolism]	NA|335aa|up_7|NZ_CP006630.1_747364_748369_+	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism]	NA|647aa|up_6|NZ_CP006630.1_748842_750783_+	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|628aa|up_5|NZ_CP006630.1_751053_752937_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|594aa|up_4|NZ_CP006630.1_752948_754730_+	TIGR01389, recQ, ATP-dependent DNA helicase RecQ	NA|326aa|up_3|NZ_CP006630.1_754951_755929_+	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|505aa|up_2|NZ_CP006630.1_755921_757436_+	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold	NA|353aa|up_1|NZ_CP006630.1_757675_758734_+	PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional	NA|181aa|up_0|NZ_CP006630.1_758892_759435_+	COG4502, COG4502, 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]	NA|306aa|down_0|NZ_CP006630.1_760042_760960_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|34aa|down_1|NZ_CP006630.1_761052_761154_+	NA	NA|502aa|down_2|NZ_CP006630.1_761231_762737_-	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|167aa|down_3|NZ_CP006630.1_763076_763577_-	COG0780, COG0780, Enzyme related to GTP cyclohydrolase I [General function prediction only]	NA|289aa|down_4|NZ_CP006630.1_763596_764463_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|133aa|down_5|NZ_CP006630.1_765263_765662_+	COG1780, NrdI, Protein involved in ribonucleotide reduction [Nucleotide transport and metabolism]	NA|702aa|down_6|NZ_CP006630.1_765624_767730_+	PRK07632, PRK07632, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|324aa|down_7|NZ_CP006630.1_767847_768819_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|52aa|down_8|NZ_CP006630.1_769318_769474_+	NA	NA|324aa|down_9|NZ_CP006630.1_769512_770484_+	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism]
GCF_000737615.1_ASM73761v1	NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	2	936554-936711	1,2	PILER-CR,CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCAACTTGCATTGCTTGTAGAATCTCTTTTCGAAATTCT,TCTTTTCGAAATTCTCTGTGTTGGGGCCC	39,29	1	11	936661-936679|936661-936679|936661-936679|936661-936679|936661-936679|936661-936679|936661-936679|936661-936679|936661-936679|936661-936679|936661-936679	NZ_CP006630.1_815048-815066|NZ_CP006630.1_1275797-1275815|NZ_CP006630.1_1275855-1275873|NZ_CP006630.1_2009427-2009445|NZ_CP006630.1_2349473-2349455|NZ_CP006630.1_174602-174620|NZ_CP006630.1_606829-606811|NZ_CP006630.1_916388-916370|NZ_CP006630.1_1135249-1135231|NZ_CP006630.1_1350434-1350452|NZ_CP006630.1_1687606-1687624	NA:NA	2,1	2	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA	NA|192aa|up_9|NZ_CP006630.1_922992_923568_+	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|175aa|up_8|NZ_CP006630.1_923572_924097_+	TIGR02227, Inactive_signal_peptidase_IA	NA|192aa|up_7|NZ_CP006630.1_924112_924688_+	TIGR02227, Inactive_signal_peptidase_IA	NA|1159aa|up_6|NZ_CP006630.1_924847_928324_+	TIGR02773, ATP-dependent_helicase/deoxyribonuclease_subunit_B, helicase-exonuclease AddAB, AddB subunit	NA|1218aa|up_5|NZ_CP006630.1_928324_931978_+	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type	NA|301aa|up_4|NZ_CP006630.1_932143_933046_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|130aa|up_3|NZ_CP006630.1_933373_933763_+	PRK13673, PRK13673, hypothetical protein; Provisional	NA|439aa|up_2|NZ_CP006630.1_933934_935251_-	PRK13512, PRK13512, coenzyme A disulfide reductase; Provisional	NA|275aa|up_1|NZ_CP006630.1_935302_936127_-	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily	NA|103aa|up_0|NZ_CP006630.1_936240_936549_+	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only]	NA|605aa|down_0|NZ_CP006630.1_937202_939017_+	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|870aa|down_1|NZ_CP006630.1_939219_941829_+	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|290aa|down_2|NZ_CP006630.1_941887_942757_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|214aa|down_3|NZ_CP006630.1_943993_944635_+	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]	NA|172aa|down_4|NZ_CP006630.1_945729_946245_+	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|145aa|down_5|NZ_CP006630.1_946555_946990_+	pfam03642, MAP, MAP domain	NA|62aa|down_6|NZ_CP006630.1_947246_947432_-	pfam11151, DUF2929, Protein of unknown function (DUF2929)	NA|314aa|down_7|NZ_CP006630.1_947726_948668_+	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3	NA|415aa|down_8|NZ_CP006630.1_948679_949924_+	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II	NA|309aa|down_9|NZ_CP006630.1_950590_951517_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
GCF_000737615.1_ASM73761v1	NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	3	1213089-1213181	3	CRISPRCasFinder	no	cas3	cas3,DEDDh,DinG,csa3,WYL	Unclear	TAAGAAACAGTAATCAATAAATTGATAACT	30	0	0	NA	NA	NA	1	1	Unclear	cas3,DEDDh,DinG,csa3,WYL	NA,NA	NA|215aa|up_9|NZ_CP006630.1_1202964_1203609_+	COG0036, Rpe, Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]	NA|214aa|up_8|NZ_CP006630.1_1203615_1204257_+	COG1564, THI80, Thiamine pyrophosphokinase [Coenzyme metabolism]	NA|63aa|up_7|NZ_CP006630.1_1204638_1204827_-	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|125aa|up_6|NZ_CP006630.1_1205269_1205644_+	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown]	NA|549aa|up_5|NZ_CP006630.1_1205658_1207305_+	COG1461, COG1461, Predicted kinase related to dihydroxyacetone kinase [General function prediction only]	cas3|687aa|up_4|NZ_CP006630.1_1207493_1209554_+	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional	NA|191aa|up_3|NZ_CP006630.1_1209755_1210328_+	PRK04424, PRK04424, transcription factor FapR	NA|329aa|up_2|NZ_CP006630.1_1210332_1211319_+	PRK05331, PRK05331, phosphate acyltransferase PlsX	NA|309aa|up_1|NZ_CP006630.1_1211311_1212238_+	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|245aa|up_0|NZ_CP006630.1_1212230_1212965_+	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|78aa|down_0|NZ_CP006630.1_1213270_1213504_+	PRK00982, acpP, acyl carrier protein; Provisional	NA|244aa|down_1|NZ_CP006630.1_1213619_1214351_+	PRK00102, rnc, ribonuclease III; Reviewed	NA|1189aa|down_2|NZ_CP006630.1_1214497_1218064_+	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|417aa|down_3|NZ_CP006630.1_1218063_1219314_+	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|111aa|down_4|NZ_CP006630.1_1219300_1219633_+	PRK00118, PRK00118, putative DNA-binding protein; Validated	NA|456aa|down_5|NZ_CP006630.1_1219658_1221026_+	PRK10867, PRK10867, signal recognition particle protein; Provisional	NA|92aa|down_6|NZ_CP006630.1_1221371_1221647_+	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis]	NA|168aa|down_7|NZ_CP006630.1_1221834_1222338_+	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|246aa|down_8|NZ_CP006630.1_1222337_1223075_+	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|117aa|down_9|NZ_CP006630.1_1223177_1223528_+	PRK05338, rplS, 50S ribosomal protein L19; Provisional
GCF_000737615.1_ASM73761v1	NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	4	1421147-1421226	4	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCAACTTGCACATTATTGTAAGCTG	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|68aa|up_5|NZ_CP006630.1_1412627_1412831_-,NA	NA|379aa|up_9|NZ_CP006630.1_1406977_1408114_+	pfam05816, TelA, Toxic anion resistance protein (TelA)	NA|448aa|up_8|NZ_CP006630.1_1408187_1409531_-	COG1114, BrnQ, Branched-chain amino acid permeases [Amino acid transport and metabolism]	NA|629aa|up_7|NZ_CP006630.1_1409755_1411642_-	COG4548, NorD, Nitric oxide reductase activation protein [Inorganic ion transport and metabolism]	NA|264aa|up_6|NZ_CP006630.1_1411655_1412447_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|68aa|up_5|NZ_CP006630.1_1412627_1412831_-	NA	NA|270aa|up_4|NZ_CP006630.1_1412859_1413669_-	cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins	NA|423aa|up_3|NZ_CP006630.1_1414248_1415517_-	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA|933aa|up_2|NZ_CP006630.1_1415530_1418329_-	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed	NA|452aa|up_1|NZ_CP006630.1_1418617_1419973_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|220aa|up_0|NZ_CP006630.1_1419969_1420629_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|205aa|down_0|NZ_CP006630.1_1421769_1422384_-	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|357aa|down_1|NZ_CP006630.1_1422400_1423471_-	PRK12446, PRK12446, undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed	NA|170aa|down_2|NZ_CP006630.1_1423482_1423992_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|497aa|down_3|NZ_CP006630.1_1424391_1425882_-	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|74aa|down_4|NZ_CP006630.1_1426073_1426295_-	COG4479, COG4479, Uncharacterized protein conserved in bacteria [Function unknown]	NA|167aa|down_5|NZ_CP006630.1_1426294_1426795_-	COG2190, NagE, Phosphotransferase system IIA components [Carbohydrate transport and metabolism]	NA|143aa|down_6|NZ_CP006630.1_1426806_1427235_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|178aa|down_7|NZ_CP006630.1_1427227_1427761_-	PRK13014, PRK13014, methionine sulfoxide reductase A; Provisional	NA|280aa|down_8|NZ_CP006630.1_1427850_1428690_-	TIGR00762, DegV, EDD domain protein, DegV family	NA|160aa|down_9|NZ_CP006630.1_1428704_1429184_-	pfam00186, DHFR_1, Dihydrofolate reductase
GCF_000737615.1_ASM73761v1	NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	5	2007974-2008055	5	CRISPRCasFinder	no	DEDDh	cas3,DEDDh,DinG,csa3,WYL	Unclear	TGTTGGGGCCCCGCCAACCTGCATT	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|92aa|up_6|NZ_CP006630.1_2002171_2002447_+,NA|129aa|up_1|NZ_CP006630.1_2006429_2006816_-,NA|138aa|down_1|NZ_CP006630.1_2009738_2010152_-,NA|37aa|down_2|NZ_CP006630.1_2010180_2010291_-,NA|31aa|down_6|NZ_CP006630.1_2013296_2013389_-	NA|419aa|up_9|NZ_CP006630.1_2000094_2001351_-	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29)	NA|67aa|up_8|NZ_CP006630.1_2001353_2001554_-	COG4840, COG4840, Uncharacterized protein conserved in bacteria [Function unknown]	NA|155aa|up_7|NZ_CP006630.1_2001700_2002165_+	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase	NA|92aa|up_6|NZ_CP006630.1_2002171_2002447_+	NA	NA|406aa|up_5|NZ_CP006630.1_2002724_2003942_+	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair]	NA|210aa|up_4|NZ_CP006630.1_2004054_2004684_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|348aa|up_3|NZ_CP006630.1_2004673_2005717_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|234aa|up_2|NZ_CP006630.1_2005713_2006415_-	COG4758, COG4758, Predicted membrane protein [Function unknown]	NA|129aa|up_1|NZ_CP006630.1_2006429_2006816_-	NA	NA|253aa|up_0|NZ_CP006630.1_2007032_2007791_-	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|329aa|down_0|NZ_CP006630.1_2008319_2009306_+	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|138aa|down_1|NZ_CP006630.1_2009738_2010152_-	NA	NA|37aa|down_2|NZ_CP006630.1_2010180_2010291_-	NA	NA|244aa|down_3|NZ_CP006630.1_2010376_2011108_-	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|438aa|down_4|NZ_CP006630.1_2011109_2012423_-	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|167aa|down_5|NZ_CP006630.1_2012714_2013215_+	COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism]	NA|31aa|down_6|NZ_CP006630.1_2013296_2013389_-	NA	DEDDh|185aa|down_7|NZ_CP006630.1_2013605_2014160_+	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III	NA|357aa|down_8|NZ_CP006630.1_2014226_2015297_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|177aa|down_9|NZ_CP006630.1_2015543_2016074_-	pfam11667, DUF3267, Putative zincin peptidase
GCF_000737615.1_ASM73761v1	NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	6	2067631-2067716	6	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TGTTGAGGCCCCACCCCAACTTACATTGT	29	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|59aa|up_7|NZ_CP006630.1_2057773_2057950_-,NA|33aa|up_6|NZ_CP006630.1_2058191_2058290_-,NA	NA|299aa|up_9|NZ_CP006630.1_2055959_2056856_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|127aa|up_8|NZ_CP006630.1_2056852_2057233_-	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|59aa|up_7|NZ_CP006630.1_2057773_2057950_-	NA	NA|33aa|up_6|NZ_CP006630.1_2058191_2058290_-	NA	NA|429aa|up_5|NZ_CP006630.1_2058489_2059776_+	PRK08637, PRK08637, hypothetical protein; Provisional	NA|579aa|up_4|NZ_CP006630.1_2060054_2061791_-	pfam03642, MAP, MAP domain	NA|331aa|up_3|NZ_CP006630.1_2062179_2063172_+	TIGR03395, Sphingomyelinase_C, sphingomyelin phosphodiesterase	NA|339aa|up_2|NZ_CP006630.1_2063664_2064681_-	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|322aa|up_1|NZ_CP006630.1_2064791_2065757_-	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|408aa|up_0|NZ_CP006630.1_2066192_2067416_+	PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed	NA|436aa|down_0|NZ_CP006630.1_2067856_2069164_+	COG0168, TrkG, Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	NA|539aa|down_1|NZ_CP006630.1_2069704_2071321_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|95aa|down_2|NZ_CP006630.1_2071396_2071681_-	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|248aa|down_3|NZ_CP006630.1_2071855_2072599_+	pfam02517, Abi, CAAX protease self-immunity	NA|400aa|down_4|NZ_CP006630.1_2072623_2073823_-	PRK10819, PRK10819, transport protein TonB; Provisional	NA|209aa|down_5|NZ_CP006630.1_2074019_2074646_+	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only]	NA|262aa|down_6|NZ_CP006630.1_2075006_2075792_+	cd07583, nitrilase_5, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases)	NA|45aa|down_7|NZ_CP006630.1_2076390_2076525_-	PRK14752, PRK14752, delta-lysin family phenol-soluble modulin	NA|190aa|down_8|NZ_CP006630.1_2076760_2077330_+	smart00793, AgrB, Accessory gene regulator B	NA|47aa|down_9|NZ_CP006630.1_2077326_2077467_+	pfam05931, AgrD, Staphylococcal AgrD protein
GCF_000737615.1_ASM73761v1	NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	7	2315152-2315236	7	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCAACTTGCACATTATTGTATGCTGACTTT	30	1	4	2315182-2315206|2315182-2315206|2315182-2315206|2315182-2315206	NZ_CP006630.1_1139392-1139368|NZ_CP006630.1_1861867-1861891|NZ_CP006630.1_2315238-2315262|NZ_CP006630.1_1139336-1139312	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|55aa|up_9|NZ_CP006630.1_2305659_2305824_+,NA|106aa|up_8|NZ_CP006630.1_2306068_2306386_+,NA|84aa|up_5|NZ_CP006630.1_2311510_2311762_+,NA|57aa|up_0|NZ_CP006630.1_2314902_2315073_+,NA	NA|55aa|up_9|NZ_CP006630.1_2305659_2305824_+	NA	NA|106aa|up_8|NZ_CP006630.1_2306068_2306386_+	NA	NA|1056aa|up_7|NZ_CP006630.1_2306572_2309740_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|422aa|up_6|NZ_CP006630.1_2309856_2311122_-	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|84aa|up_5|NZ_CP006630.1_2311510_2311762_+	NA	NA|255aa|up_4|NZ_CP006630.1_2311753_2312518_-	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|147aa|up_3|NZ_CP006630.1_2312680_2313121_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|404aa|up_2|NZ_CP006630.1_2313113_2314325_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|117aa|up_1|NZ_CP006630.1_2314426_2314777_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|57aa|up_0|NZ_CP006630.1_2314902_2315073_+	NA	NA|341aa|down_0|NZ_CP006630.1_2315413_2316436_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|200aa|down_1|NZ_CP006630.1_2316455_2317055_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|78aa|down_2|NZ_CP006630.1_2317061_2317295_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|149aa|down_3|NZ_CP006630.1_2317300_2317747_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|162aa|down_4|NZ_CP006630.1_2317760_2318246_-	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|420aa|down_5|NZ_CP006630.1_2318242_2319502_-	cd00887, MoeA, MoeA family	NA|165aa|down_6|NZ_CP006630.1_2319564_2320059_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|169aa|down_7|NZ_CP006630.1_2320060_2320567_-	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|335aa|down_8|NZ_CP006630.1_2320597_2321602_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|202aa|down_9|NZ_CP006630.1_2321770_2322376_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
GCF_000737615.1_ASM73761v1	NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	8	2469171-2469263	8	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TTCTTCAAATTTATTTGTTAGAAAG	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|35aa|up_2|NZ_CP006630.1_2466824_2466929_+,NA|32aa|down_0|NZ_CP006630.1_2469467_2469563_-	NA|200aa|up_9|NZ_CP006630.1_2460301_2460901_-	COG1651, DsbG, Protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones]	NA|121aa|up_8|NZ_CP006630.1_2460919_2461282_-	pfam14729, DUF4467, Domain of unknown function with cystatin-like fold (DUF4467)	NA|417aa|up_7|NZ_CP006630.1_2461536_2462787_+	pfam02388, FemAB, FemAB family	NA|244aa|up_6|NZ_CP006630.1_2462883_2463615_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|240aa|up_5|NZ_CP006630.1_2463611_2464331_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|260aa|up_4|NZ_CP006630.1_2464311_2465091_-	cd13711, PBP2_Ngo0372_TcyA, Substrate binding domain of ABC transporters involved in cystine import; the type 2 periplasmic binding protein fold	NA|480aa|up_3|NZ_CP006630.1_2465211_2466651_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|35aa|up_2|NZ_CP006630.1_2466824_2466929_+	NA	NA|229aa|up_1|NZ_CP006630.1_2467082_2467769_-	PRK14119, gpmA, phosphoglyceromutase; Provisional	NA|289aa|up_0|NZ_CP006630.1_2468094_2468961_-	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|32aa|down_0|NZ_CP006630.1_2469467_2469563_-	NA	NA|437aa|down_1|NZ_CP006630.1_2469657_2470968_+	pfam11621, Sbi-IV, C3 binding domain 4 of IgG-bind protein SBI	NA|310aa|down_2|NZ_CP006630.1_2471459_2472389_+	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|316aa|down_3|NZ_CP006630.1_2472956_2473904_+	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|326aa|down_4|NZ_CP006630.1_2473905_2474883_+	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin	NA|156aa|down_5|NZ_CP006630.1_2474934_2475402_-	pfam06177, QueT, QueT transporter	NA|231aa|down_6|NZ_CP006630.1_2475412_2476105_-	COG1424, BioW, Pimeloyl-CoA synthetase [Coenzyme metabolism]	NA|372aa|down_7|NZ_CP006630.1_2476115_2477231_-	COG0156, BioF, 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]	NA|336aa|down_8|NZ_CP006630.1_2477208_2478216_-	PRK06256, PRK06256, biotin synthase; Validated	NA|453aa|down_9|NZ_CP006630.1_2478217_2479576_-	TIGR00508, hypothetical_protein_DESPIG_00326, adenosylmethionine-8-amino-7-oxononanoate transaminase
GCF_000737615.1_ASM73761v1	NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	9	2827647-2827732	9	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCAACTTGCACATTATTGTAAGCTGACTTT	30	1	12	2827677-2827702|2827677-2827702|2827677-2827702|2827677-2827702|2827677-2827702|2827677-2827702|2827677-2827702|2827677-2827702|2827677-2827702|2827677-2827702|2827677-2827702|2827677-2827702	NZ_CP006630.1_606895-606870|NZ_CP006630.1_1139507-1139482|NZ_CP006630.1_1275730-1275755|NZ_CP006630.1_769010-768985|NZ_CP006630.1_769066-769041|NZ_CP006630.1_814924-814949|NZ_CP006630.1_1833046-1833021|NZ_CP006630.1_2057587-2057612|NZ_CP006630.1_2232777-2232802|NZ_CP006630.1_2349538-2349513|NZ_CP006630.1_2153524-2153499|NZ_CP006630.1_2153862-2153837	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|64aa|up_6|NZ_CP006630.1_2823124_2823316_+,NA|166aa|up_5|NZ_CP006630.1_2823922_2824420_-,NA|64aa|up_4|NZ_CP006630.1_2824876_2825068_+,NA	NA|171aa|up_9|NZ_CP006630.1_2819601_2820114_-	COG3247, HdeD, Uncharacterized conserved protein [Function unknown]	NA|253aa|up_8|NZ_CP006630.1_2820403_2821162_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|627aa|up_7|NZ_CP006630.1_2821151_2823032_+	pfam02687, FtsX, FtsX-like permease family	NA|64aa|up_6|NZ_CP006630.1_2823124_2823316_+	NA	NA|166aa|up_5|NZ_CP006630.1_2823922_2824420_-	NA	NA|64aa|up_4|NZ_CP006630.1_2824876_2825068_+	NA	NA|67aa|up_3|NZ_CP006630.1_2825459_2825660_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|190aa|up_2|NZ_CP006630.1_2825786_2826356_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|132aa|up_1|NZ_CP006630.1_2826606_2827002_-	pfam11345, DUF3147, Protein of unknown function (DUF3147)	NA|118aa|up_0|NZ_CP006630.1_2827069_2827423_-	pfam11345, DUF3147, Protein of unknown function (DUF3147)	NA|280aa|down_0|NZ_CP006630.1_2828032_2828872_-	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|240aa|down_1|NZ_CP006630.1_2828914_2829634_-	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA|626aa|down_2|NZ_CP006630.1_2829633_2831511_-	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA|460aa|down_3|NZ_CP006630.1_2831577_2832957_-	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA|118aa|down_4|NZ_CP006630.1_2833100_2833454_-	PRK00499, rnpA, ribonuclease P; Reviewed	NA|46aa|down_5|NZ_CP006630.1_2833574_2833712_-	pfam00468, Ribosomal_L34, Ribosomal protein L34	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
