The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	2833899	737874	745694	2833899		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|737874_738930_-	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|738929_739616_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|739590_740064_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093553.1|740405_740846_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000637683.1|741125_741710_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062976.1|741808_742522_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|742525_742945_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|742946_743615_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604508.1|743965_744559_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	44.0	6.8e-39
WP_001217800.1|744542_745694_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	6.0e-23
>prophage 2
NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	2833899	757675	772185	2833899		uncultured_Caudovirales_phage(50.0%)	14	NA	NA
WP_038412471.1|757675_758734_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.4	6.1e-22
WP_000197262.1|758892_759435_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429011.1|760042_760960_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	6.2e-07
WP_031760357.1|761052_761154_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193751.1|761231_762737_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|763076_763577_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068497.1|763596_764463_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|765263_765662_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855509.1|765624_767730_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.6	0.0e+00
WP_000562498.1|767847_768819_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|769318_769474_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876317.1|769512_770484_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.6	3.6e-138
WP_001245572.1|770470_771427_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616873.1|771423_772185_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 3
NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	2833899	852602	874103	2833899	integrase,coat,capsid,terminase	Staphylococcus_phage(77.78%)	33	850909:850930	871571:871592
850909:850930	attL	AGGGAGTGGGACAGAAATGATA	NA	NA	NA	NA
WP_000571213.1|852602_853628_+	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.8	9.4e-28
WP_000520233.1|853620_854316_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000732334.1|854333_855155_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000266157.1|855297_856518_-|integrase	site-specific integrase	integrase	Q4ZE80	Staphylococcus_phage	47.5	6.4e-100
WP_000733774.1|856605_857334_-	staphylococcal enterotoxin type K	NA	A0EX09	Staphylococcus_phage	31.8	5.5e-22
WP_038412484.1|857357_858086_-	staphylococcal enterotoxin type Q	NA	A0EX09	Staphylococcus_phage	34.9	1.5e-27
WP_001228759.1|858155_858587_-	hypothetical protein	NA	Q4ZCB6	Staphylococcus_virus	56.0	5.1e-36
WP_000281657.1|858603_859062_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0H4J322	Staphylococcus_phage	83.0	5.1e-66
WP_001260004.1|859073_859406_-	helix-turn-helix transcriptional regulator	NA	A0A1J0MFC1	Staphylococcus_phage	74.5	1.6e-37
WP_000243851.1|859598_859862_+	helix-turn-helix transcriptional regulator	NA	A0A2H4J9X2	uncultured_Caudovirales_phage	94.8	3.1e-36
WP_000091731.1|859854_860127_+	winged helix-turn-helix domain-containing protein	NA	Q4ZE77	Staphylococcus_phage	90.0	9.7e-41
WP_000784875.1|860138_860285_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001058486.1|860277_860487_+	hypothetical protein	NA	Q4ZE76	Staphylococcus_phage	94.2	1.7e-29
WP_001103942.1|860489_860810_+	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	51.9	1.3e-20
WP_001002732.1|860873_861743_+	primase C-terminal domain-containing protein	NA	A0A1W6JQL5	Staphylococcus_phage	92.7	3.4e-156
WP_000390454.1|861759_863229_+	hypothetical protein	NA	A0A1W6JQD6	Staphylococcus_phage	99.0	2.9e-288
WP_001039168.1|863514_863877_+	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	99.2	8.9e-66
WP_000998181.1|863878_864163_+	hypothetical protein	NA	A0A1W6JQE4	Staphylococcus_phage	95.7	1.9e-47
WP_001019764.1|864159_864801_+	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	91.5	1.5e-108
WP_001190615.1|865317_865659_+	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	99.1	1.4e-57
WP_000846285.1|865670_866249_+	hypothetical protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	38.4	1.4e-28
WP_000448773.1|866266_866485_+|capsid	capsid morphogenesis B protein	capsid	NA	NA	NA	NA
WP_000771368.1|866535_867063_+|coat	spore coat protein	coat	A0A1W6JQH7	Staphylococcus_phage	97.1	3.5e-87
WP_045181470.1|867194_867407_+	hypothetical protein	NA	Q4ZE86	Staphylococcus_phage	98.6	1.1e-31
WP_001293067.1|867403_867973_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	97.9	1.0e-100
WP_000278085.1|868280_869081_+	staphylococcal enterotoxin type B	NA	A0A097PAT7	Streptococcus_pyogenes_phage	49.4	1.0e-53
WP_001035631.1|869158_869716_-	DUF4888 domain-containing protein	NA	A0A1W6JQE5	Staphylococcus_phage	73.8	1.4e-70
WP_001795626.1|870089_870242_+	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	98.0	7.6e-19
WP_000139423.1|870312_870423_+	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	100.0	1.7e-12
WP_001286805.1|870424_870610_+	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	100.0	2.7e-26
WP_000752917.1|871733_871928_+	CsbD family protein	NA	NA	NA	NA	NA
871571:871592	attR	TATCATTTCTGTCCCACTCCCT	NA	NA	NA	NA
WP_001183851.1|872161_873013_-	DUF368 domain-containing protein	NA	NA	NA	NA	NA
WP_000168845.1|873341_874103_+	Fe-S cluster assembly ATPase SufC	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
>prophage 4
NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	2833899	962370	1006089	2833899	tRNA,bacteriocin,transposase,protease	Streptococcus_phage(33.33%)	38	NA	NA
WP_000277724.1|962370_964017_+|transposase	IS1182-like element ISSau3 family transposase	transposase	A0ZS58	Staphylococcus_virus	98.9	2.4e-291
WP_000448937.1|964042_965032_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000258003.1|965326_965722_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_001217728.1|966092_966812_+	adaptor protein MecA	NA	NA	NA	NA	NA
WP_000959298.1|966932_967919_+	competence protein CoiA	NA	NA	NA	NA	NA
WP_000082725.1|967966_969775_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
WP_000896697.1|970234_971041_-|protease	protease adaptor protein YjbH	protease	NA	NA	NA	NA
WP_000214067.1|971063_971429_-	truncated hemoglobin	NA	NA	NA	NA	NA
WP_000224622.1|971532_972126_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_001242107.1|972311_972659_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001077683.1|972675_973311_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_001270834.1|973327_974137_+	NAD kinase	NA	NA	NA	NA	NA
WP_000669925.1|974133_974988_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000062407.1|975008_976394_+	magnesium transporter	NA	NA	NA	NA	NA
WP_000395162.1|976403_978248_+	monovalent cation:proton antiporter family protein	NA	NA	NA	NA	NA
WP_000933195.1|978526_979297_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_000933105.1|979493_980579_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000570701.1|980920_982489_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_038412499.1|982631_983390_+	esterase family protein	NA	NA	NA	NA	NA
WP_001060547.1|983555_984281_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000355328.1|984282_985134_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000600387.1|985868_986378_+	YjcG family protein	NA	NA	NA	NA	NA
WP_001154228.1|986490_987681_-	MFS transporter	NA	NA	NA	NA	NA
WP_000258650.1|987658_988834_-	diglucosyl diacylglycerol synthase	NA	NA	NA	NA	NA
WP_000340127.1|989266_990751_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
WP_001798480.1|990731_990992_+	YueH family protein	NA	NA	NA	NA	NA
WP_001049958.1|990991_992554_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.0	3.2e-35
WP_000928413.1|992855_993659_+	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_078064575.1|993874_996199_+|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.1e-11
WP_000021872.1|996215_997574_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000414178.1|997712_999224_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000287265.1|999712_1000282_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000876826.1|1000491_1000710_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000668820.1|1000790_1001777_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000214898.1|1001975_1002152_+	YkvS family protein	NA	NA	NA	NA	NA
WP_001033867.1|1002166_1002769_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_014363402.1|1003164_1004811_+|transposase	IS1182 family transposase	transposase	A0A146ICT8	Staphylococcus_phage	99.3	3.7e-292
WP_029656376.1|1005822_1006089_+|bacteriocin	bacteriocin transporter	bacteriocin	NA	NA	NA	NA
>prophage 5
NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	2833899	1040302	1048775	2833899		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861570.1|1040302_1040785_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	8.0e-22
WP_001010401.1|1040771_1041896_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174047.1|1041899_1042604_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	41.2	1.4e-46
WP_000848350.1|1042603_1042867_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666799.1|1042868_1043540_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032747.1|1043532_1045722_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.8e-140
WP_000483727.1|1045700_1047185_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.5	1.6e-44
WP_000030810.1|1047177_1048206_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	1.3e-61
WP_000238670.1|1048208_1048775_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	3.6e-29
>prophage 6
NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	2833899	1305892	1310842	2833899		Staphylococcus_phage(100.0%)	9	NA	NA
WP_001659797.1|1305892_1306090_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	48.4	1.7e-10
WP_078065144.1|1306779_1307004_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	71.0	4.3e-18
WP_001002343.1|1307299_1307506_+	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	56.7	1.9e-12
WP_001788716.1|1308201_1308312_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000006110.1|1308740_1308926_+	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
WP_000477491.1|1309437_1309542_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000956747.1|1309668_1309920_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001813273.1|1310393_1310648_+	hypothetical protein	NA	A0A1J0MF61	Staphylococcus_phage	62.7	1.4e-25
WP_000780597.1|1310647_1310842_+	hypothetical protein	NA	A0A1J0MG79	Staphylococcus_phage	71.4	2.8e-18
>prophage 7
NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	2833899	1487692	1563077	2833899	head,integrase,terminase,holin,capsid,tail,portal,tRNA,protease	Staphylococcus_phage(85.0%)	104	1534136:1534150	1563811:1563825
WP_000858801.1|1487692_1488985_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	1.5e-54
WP_000525065.1|1489278_1491999_-	ATP-dependent DNA helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	34.6	1.1e-46
WP_000049916.1|1492022_1492994_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000361537.1|1492980_1494183_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	43.3	5.4e-35
WP_000690024.1|1494187_1495330_-	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA	NA
WP_000839926.1|1495587_1495905_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_001827022.1|1496240_1496921_-	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_000154692.1|1496992_1497580_-	DUF1405 domain-containing protein	NA	NA	NA	NA	NA
WP_000005216.1|1497569_1498145_-	YpiB family protein	NA	G3MAV7	Bacillus_virus	27.2	2.7e-08
WP_000389518.1|1498158_1499403_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000245912.1|1499409_1500708_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_000776330.1|1500717_1501782_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_001269940.1|1501807_1502974_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.3	2.6e-34
WP_000789522.1|1503360_1503561_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000442477.1|1503770_1504220_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_001096478.1|1504311_1505271_-	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_000774684.1|1505272_1505998_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_000450555.1|1506000_1506573_-	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_001043863.1|1507003_1507276_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000161742.1|1507446_1508445_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_000165530.1|1508461_1509772_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_000133960.1|1509988_1511164_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_031844924.1|1511419_1511611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031844926.1|1511727_1511832_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000644394.1|1511874_1512534_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_000681761.1|1512610_1513579_+	asparaginase	NA	NA	NA	NA	NA
WP_001174260.1|1513693_1514680_-	YpdA family putative bacillithiol disulfide reductase	NA	NA	NA	NA	NA
WP_001824277.1|1514840_1514957_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000069308.1|1515081_1516542_-	elastin-binding protein EbpS	NA	NA	NA	NA	NA
WP_000902114.1|1516694_1518074_-	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.6	2.2e-56
WP_001163813.1|1518063_1519017_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_001151997.1|1519124_1519373_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001186908.1|1519478_1520024_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_000476869.1|1520426_1521371_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000470325.1|1521461_1521647_-	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	96.7	1.9e-24
WP_024937002.1|1521895_1522879_-	Panton-Valentine bi-component leukocidin subunit F	NA	A0A2I6PEU3	Staphylococcus_phage	100.0	4.0e-185
WP_000239544.1|1522874_1523813_-	Panton-Valentine bi-component leukocidin subunit S	NA	A0A2I6PF61	Staphylococcus_phage	100.0	1.7e-180
WP_000909204.1|1524202_1525657_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2I6PF47	Staphylococcus_phage	100.0	7.5e-289
WP_000339141.1|1525667_1525970_-|holin	phage holin	holin	A0A2I6PF56	Staphylococcus_phage	100.0	3.1e-48
WP_000340977.1|1526095_1526470_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_001040259.1|1526525_1526813_-	hypothetical protein	NA	G4KNR2	Staphylococcus_phage	100.0	9.9e-44
WP_001153681.1|1526859_1527012_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_000582190.1|1527001_1530787_-	hypothetical protein	NA	A0EX05	Staphylococcus_phage	100.0	0.0e+00
WP_000567413.1|1530802_1532287_-|tail	phage tail family protein	tail	A0EX04	Staphylococcus_phage	100.0	4.5e-297
WP_001643732.1|1532283_1536813_-|tail	phage tail tape measure protein	tail	A0EX03	Staphylococcus_phage	100.0	0.0e+00
1534136:1534150	attL	TCTTTAATTTTACTA	NA	NA	NA	NA
WP_001096355.1|1537057_1537408_-	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_071621395.1|1537457_1537682_-	Ig-like domain-containing protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_000268735.1|1537723_1538368_-|tail	phage tail protein	tail	A0EWZ9	Staphylococcus_phage	100.0	3.8e-120
WP_000565498.1|1538368_1538776_-	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000114226.1|1538772_1539177_-	HK97 gp10 family phage protein	NA	G4KNQ5	Staphylococcus_phage	100.0	4.3e-69
WP_000755150.1|1539173_1539536_-|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000150936.1|1539519_1539804_-|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000238236.1|1539793_1540078_-	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000154559.1|1540097_1541243_-|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000642728.1|1541266_1542004_-|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
WP_000025274.1|1541987_1543175_-|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
WP_000625088.1|1543190_1544852_-|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
WP_000402904.1|1544848_1545193_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000988330.1|1545323_1545623_-	HNH endonuclease	NA	G4KNP8	Staphylococcus_phage	100.0	4.6e-52
WP_000590122.1|1545854_1546271_-	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000265043.1|1546298_1546499_-	DUF1514 family protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
WP_001005262.1|1546498_1547149_-	hypothetical protein	NA	D2JLD8	Staphylococcus_phage	100.0	8.9e-117
WP_000237868.1|1547307_1547457_-	transcriptional activator RinB	NA	A0A2I6PDY4	Staphylococcus_phage	98.0	1.1e-17
WP_001125015.1|1547459_1547660_-	hypothetical protein	NA	A0A2I6PF22	Staphylococcus_phage	100.0	1.8e-28
WP_000195782.1|1547634_1547823_-	DUF1381 domain-containing protein	NA	A0A2I6PDV0	Staphylococcus_phage	100.0	2.1e-26
WP_001282074.1|1547819_1548065_-	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	100.0	5.0e-36
WP_038412526.1|1548101_1548611_-	dUTP diphosphatase	NA	M9NS45	Staphylococcus_phage	97.6	3.6e-89
WP_001065068.1|1548603_1548852_-	DUF1024 family protein	NA	A0A0E3T8I2	Staphylococcus_phage	98.8	5.4e-38
WP_038412528.1|1548865_1549108_-	phage protein	NA	A0A2I6PDU1	Staphylococcus_phage	97.5	1.6e-39
WP_000029366.1|1549111_1549468_-	hypothetical protein	NA	G4KNP3	Staphylococcus_phage	100.0	1.1e-60
WP_001187236.1|1549468_1549654_-	DUF3113 family protein	NA	A0A068A236	Staphylococcus_phage	95.1	7.8e-26
WP_000049798.1|1549658_1550063_-	DUF1064 domain-containing protein	NA	G4KNP2	Staphylococcus_phage	100.0	1.6e-68
WP_001123669.1|1550072_1550294_-	DUF3269 family protein	NA	A0A2I6PDV8	Staphylococcus_phage	100.0	1.7e-35
WP_000256594.1|1550306_1550465_-	hypothetical protein	NA	A0A2I6PDX0	Staphylococcus_phage	98.1	4.5e-22
WP_000803062.1|1550458_1551238_-	ATP-binding protein	NA	G4KNP1	Staphylococcus_phage	100.0	3.8e-146
WP_000190254.1|1551247_1552018_-	conserved phage C-terminal domain-containing protein	NA	G4KNP0	Staphylococcus_phage	100.0	6.4e-122
WP_000414755.1|1552083_1552365_+	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
WP_001081076.1|1552357_1552507_-	hypothetical protein	NA	A7TWN0	Staphylococcus_phage	100.0	2.4e-17
WP_000057262.1|1552503_1553178_-	hypothetical protein	NA	G4KNN9	Staphylococcus_phage	100.0	8.6e-131
WP_001099007.1|1553189_1553633_-	single-stranded DNA-binding protein	NA	G4KNN8	Staphylococcus_phage	100.0	1.4e-76
WP_000840496.1|1553629_1554280_-	ERF family protein	NA	A0A0F6N3I5	Staphylococcus_phage	100.0	1.1e-119
WP_001004336.1|1554280_1554817_-	host-nuclease inhibitor Gam family protein	NA	A0A0F6N4M6	Staphylococcus_phage	100.0	1.4e-80
WP_001556704.1|1554829_1555090_-	DUF1108 family protein	NA	G4KNN5	Staphylococcus_phage	100.0	2.0e-43
WP_051900989.1|1555151_1555409_-	hypothetical protein	NA	A0A2I6PEL3	Staphylococcus_phage	98.7	1.4e-33
WP_001285954.1|1555497_1555659_-	DUF1270 domain-containing protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
WP_001124198.1|1555670_1555934_-	helix-turn-helix domain-containing protein	NA	A0A2I6PEL8	Staphylococcus_phage	100.0	2.5e-46
WP_001037095.1|1555963_1556182_-	hypothetical protein	NA	A0A2I6PDV4	Staphylococcus_phage	100.0	5.0e-32
WP_001025595.1|1556178_1556505_-	hypothetical protein	NA	G4KNN2	Staphylococcus_phage	100.0	5.4e-54
WP_001662405.1|1556581_1556719_-	hypothetical protein	NA	A0ZS11	Staphylococcus_virus	97.8	3.7e-17
WP_000435343.1|1556738_1556999_-	hypothetical protein	NA	A0A2I6PDT7	Staphylococcus_phage	100.0	3.5e-40
WP_001148617.1|1557011_1557764_-	phage antirepressor KilAC domain-containing protein	NA	G4KNN1	Staphylococcus_phage	100.0	1.1e-139
WP_000801108.1|1557824_1558052_+	hypothetical protein	NA	A7TWL9	Staphylococcus_phage	100.0	1.7e-38
WP_000502678.1|1558053_1558245_-	hypothetical protein	NA	A0A2I6PDT1	Staphylococcus_phage	100.0	9.5e-27
WP_000772137.1|1558301_1558511_+	hypothetical protein	NA	A0A2I6PDR8	Staphylococcus_phage	100.0	9.1e-31
WP_000939495.1|1558503_1558644_-	hypothetical protein	NA	A0A2I6PDT8	Staphylococcus_phage	100.0	1.9e-16
WP_000435346.1|1558658_1559102_-	hypothetical protein	NA	G4KNN0	Staphylococcus_phage	100.0	2.0e-75
WP_000548578.1|1559114_1559354_-	helix-turn-helix transcriptional regulator	NA	G4KNM9	Staphylococcus_phage	100.0	2.3e-38
WP_000094093.1|1559524_1560232_+	helix-turn-helix transcriptional regulator	NA	G4KNM8	Staphylococcus_phage	100.0	7.7e-130
WP_191239701.1|1560243_1560399_+	hypothetical protein	NA	A0A2I6PDR9	Staphylococcus_phage	98.0	1.4e-20
WP_001089804.1|1560385_1560571_+	hypothetical protein	NA	A0A2I6PDS4	Staphylococcus_phage	100.0	2.3e-25
WP_000705240.1|1560770_1560953_+	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
WP_001013104.1|1560988_1561135_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_000191466.1|1561131_1561746_-	hypothetical protein	NA	A0A2I6PEZ0	Staphylococcus_phage	100.0	6.7e-106
WP_038412533.1|1561871_1563077_+|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	99.8	8.5e-222
1563811:1563825	attR	TCTTTAATTTTACTA	NA	NA	NA	NA
>prophage 8
NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	2833899	1623892	1632204	2833899	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213908.1|1623892_1624678_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924210.1|1624803_1625694_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	3.4e-26
WP_001062177.1|1625703_1627050_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_000683914.1|1627163_1628264_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	30.6	1.0e-08
WP_000624567.1|1628266_1628944_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|1629074_1630181_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217251.1|1630404_1632204_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	3.5e-54
>prophage 9
NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	2833899	1702848	1711891	2833899	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364543.1|1702848_1703367_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.8	2.1e-28
WP_000594983.1|1703388_1705662_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.5	2.1e-64
WP_000749798.1|1705864_1708144_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1708418_1708679_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1708697_1709837_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019166.1|1709859_1710885_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005767.1|1710886_1711891_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 10
NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	2833899	1837736	1940438	2833899	head,plate,integrase,terminase,holin,capsid,tail,portal,tRNA,protease	Staphylococcus_phage(86.11%)	118	1894639:1894656	1942799:1942816
WP_001050576.1|1837736_1844294_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	93.2	1.2e-290
WP_000836467.1|1844619_1844931_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	98.1	5.3e-51
WP_001557386.1|1844952_1847370_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
WP_001025062.1|1847658_1848840_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.5	1.2e-217
WP_000526539.1|1848949_1849903_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_038412563.1|1849899_1850463_+	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	98.4	7.8e-101
WP_000757543.1|1850582_1850984_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266100.1|1851555_1852383_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_014937042.1|1852385_1852505_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196343.1|1852616_1853618_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	98.8	1.7e-183
WP_001008551.1|1853739_1854204_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_001159028.1|1854216_1855398_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	99.2	1.6e-225
WP_000493883.1|1855408_1856041_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	2.4e-111
WP_000077340.1|1856047_1857091_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.5	1.2e-195
WP_001261664.1|1857571_1859074_-	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.1e-29
WP_000221186.1|1859595_1859910_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	95.2	1.4e-51
WP_000989100.1|1859909_1861202_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	97.4	2.2e-223
WP_000163239.1|1861219_1861612_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	99.2	6.9e-72
WP_001032836.1|1862016_1862871_-	glucosaminidase domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	38.1	4.9e-38
WP_000384172.1|1863146_1863371_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001153740.1|1864148_1864592_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030460.1|1864578_1865022_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.0	5.4e-57
WP_025175276.1|1865319_1865955_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_000492902.1|1866121_1866742_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001096492.1|1867211_1867925_-	transaldolase	NA	M1PR54	Cyanophage	34.5	1.2e-18
WP_000091445.1|1868182_1868485_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200550.1|1868740_1869106_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	98.3	6.2e-59
WP_000623471.1|1869102_1869456_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
WP_000453310.1|1869705_1870539_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	1.3e-157
WP_000366163.1|1870750_1871659_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000933822.1|1871783_1872977_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000109912.1|1873348_1874941_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
WP_078065176.1|1875234_1875981_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.0	7.8e-141
WP_000672009.1|1875985_1876459_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	3.6e-83
WP_000718107.1|1876524_1876782_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778518.1|1876778_1877780_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.9	4.8e-186
WP_000348384.1|1877784_1879263_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	96.7	3.4e-281
WP_078065177.1|1879422_1879878_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	97.9	4.0e-79
WP_001838615.1|1880180_1880831_+	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	68.5	4.7e-33
WP_000070638.1|1880911_1881907_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	92.7	1.7e-66
WP_000669039.1|1881982_1882609_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	84.6	5.8e-81
WP_000627534.1|1882649_1882991_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	93.8	2.8e-53
WP_000414219.1|1883091_1883664_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.8	3.2e-25
WP_000657815.1|1883973_1884627_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000533463.1|1884636_1886343_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_001044434.1|1889217_1890072_-	M23 family metallopeptidase	NA	E5G070	Clostridium_phage	37.9	6.4e-06
WP_049280116.1|1890322_1890868_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	32.5	1.8e-09
WP_000669789.1|1891284_1891464_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_001791826.1|1891774_1892035_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702263.1|1892087_1892438_-	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_000727649.1|1893122_1893572_+	chemotaxis-inhibiting protein CHIPS	NA	A0A1P8L6A8	Staphylococcus_phage	100.0	1.1e-78
WP_001066124.1|1894303_1895065_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	44.2	1.1e-54
1894639:1894656	attL	TCAAATGATGACATTTAA	NA	NA	NA	NA
WP_000206347.1|1896742_1897531_+	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.4	7.0e-140
WP_038412575.1|1899540_1900986_-	SH3 domain-containing protein	NA	A0EWV1	Staphylococcus_virus	99.4	1.2e-294
WP_038412577.1|1900966_1901404_-|holin	phage holin	holin	A0A2H4PQP0	Staphylococcus_phage	98.6	2.0e-72
WP_038412579.1|1901459_1901855_-	hypothetical protein	NA	A0A0E3XBL9	Staphylococcus_phage	97.7	1.5e-66
WP_038412581.1|1901859_1903098_-|plate	BppU family phage baseplate upper protein	plate	Q4ZDC8	Staphylococcus_virus	99.5	1.7e-209
WP_000524040.1|1903110_1904985_-	glucosaminidase domain-containing protein	NA	Q4ZBX1	Staphylococcus_virus	100.0	0.0e+00
WP_000466778.1|1905121_1905421_-	DUF2951 domain-containing protein	NA	A0A0H4ITZ0	Staphylococcus_phage	100.0	7.6e-47
WP_000782200.1|1905460_1905634_-	XkdX family protein	NA	A0A0F6N3L7	Staphylococcus_phage	100.0	6.6e-27
WP_000705896.1|1905637_1906015_-	DUF2977 domain-containing protein	NA	A0A0F6N3G4	Staphylococcus_phage	100.0	1.5e-60
WP_038412584.1|1906014_1907838_-|plate	phage baseplate upper protein	plate	B1H3M3	Staphylococcus_phage	99.7	0.0e+00
WP_038412586.1|1907837_1909736_-	hypothetical protein	NA	Q4ZBX7	Staphylococcus_virus	99.7	0.0e+00
WP_038412588.1|1909748_1911635_-|tail	phage tail protein	tail	Q4ZBQ3	Staphylococcus_phage	99.8	0.0e+00
WP_000560181.1|1911645_1912587_-|tail	phage tail family protein	tail	Q4ZBQ4	Staphylococcus_phage	100.0	5.2e-182
WP_038412590.1|1912601_1915745_-|terminase	terminase	terminase	Q4ZBQ5	Staphylococcus_phage	99.8	0.0e+00
WP_000880587.1|1915748_1916033_-	hypothetical protein	NA	A0A0N7E0V9	Staphylococcus_phage	100.0	8.8e-45
WP_000134337.1|1916077_1916584_-	hypothetical protein	NA	Q4ZBQ7	Staphylococcus_phage	100.0	2.7e-92
WP_000057582.1|1916650_1917208_-|tail	tail protein	tail	Q4ZBQ8	Staphylococcus_phage	100.0	8.2e-103
WP_000270192.1|1917208_1917634_-	DUF3168 domain-containing protein	NA	Q4ZBQ9	Staphylococcus_phage	100.0	5.5e-75
WP_001151330.1|1917646_1918060_-	HK97 gp10 family phage protein	NA	A0A0N9BAY5	Staphylococcus_phage	100.0	1.1e-75
WP_000483041.1|1918046_1918382_-|head	phage head closure protein	head	A0A0E3TAH8	Staphylococcus_phage	100.0	8.8e-60
WP_000177351.1|1918393_1918744_-|head,tail	phage head-tail adapter protein	head,tail	A0A0H3U2R5	Staphylococcus_phage	100.0	1.9e-60
WP_000002931.1|1918749_1918893_-	hypothetical protein	NA	A0A0E3XC49	Staphylococcus_phage	100.0	4.6e-18
WP_000235168.1|1918904_1919819_-|capsid	phage major capsid protein	capsid	A0A0H3U2U7	Staphylococcus_phage	100.0	1.2e-170
WP_001019219.1|1919835_1920420_-	DUF4355 domain-containing protein	NA	A0A0N7E0U8	Staphylococcus_phage	100.0	1.3e-77
WP_000346033.1|1920522_1920729_-	hypothetical protein	NA	A0A0N9BB04	Staphylococcus_phage	100.0	3.2e-28
WP_000184133.1|1920730_1921684_-|capsid	minor capsid protein	capsid	A0A0N7E0U6	Staphylococcus_phage	99.7	6.6e-177
WP_000177422.1|1921652_1923077_-|portal	phage portal protein	portal	Q4ZBZ7	Staphylococcus_virus	100.0	6.2e-272
WP_001037578.1|1923073_1924297_-|terminase	PBSX family phage terminase large subunit	terminase	A0A0N9BAX9	Staphylococcus_phage	100.0	7.5e-242
WP_000594088.1|1924289_1924784_-|terminase	terminase small subunit	terminase	A0A0N9BAX3	Staphylococcus_phage	100.0	3.4e-84
WP_000286968.1|1925138_1925540_-	hypothetical protein	NA	A0A2H4PQK5	Staphylococcus_phage	100.0	5.6e-69
WP_000595257.1|1925540_1925714_-	transcriptional activator RinB	NA	Q4ZBK0	Staphylococcus_phage	100.0	6.4e-22
WP_001129214.1|1925726_1926185_-	hypothetical protein	NA	A0A2I6PDM7	Staphylococcus_phage	81.6	1.1e-60
WP_038412600.1|1926177_1926330_-	DUF1381 domain-containing protein	NA	Q4ZBC8	Staphylococcus_virus	98.0	7.6e-19
WP_001282074.1|1926326_1926572_-	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	100.0	5.0e-36
WP_001061834.1|1926608_1927115_-	dUTP diphosphatase	NA	G4KNP5	Staphylococcus_phage	100.0	1.0e-91
WP_000889683.1|1927129_1927291_-	hypothetical protein	NA	A0A2I6PDW5	Staphylococcus_phage	100.0	2.4e-23
WP_000454994.1|1927291_1927573_-	hypothetical protein	NA	A0A2I6PDX3	Staphylococcus_phage	100.0	8.5e-48
WP_000028424.1|1927573_1927747_-	hypothetical protein	NA	A0A2H4PQJ2	Staphylococcus_phage	100.0	1.8e-24
WP_001065099.1|1927736_1927988_-	DUF1024 family protein	NA	G4KNP4	Staphylococcus_phage	100.0	6.4e-39
WP_000131388.1|1928002_1928245_-	hypothetical protein	NA	A0A2I6PDU1	Staphylococcus_phage	100.0	3.9e-41
WP_000029366.1|1928248_1928605_-	hypothetical protein	NA	G4KNP3	Staphylococcus_phage	100.0	1.1e-60
WP_001187236.1|1928605_1928791_-	DUF3113 family protein	NA	A0A068A236	Staphylococcus_phage	95.1	7.8e-26
WP_021758092.1|1928795_1929200_-	DUF1064 domain-containing protein	NA	A0A059T5A5	Staphylococcus_phage	98.5	8.4e-73
WP_000451862.1|1929196_1929622_-	DNA N-6-adenine-methyltransferase	NA	Q4ZAC6	Staphylococcus_virus	100.0	8.0e-82
WP_001123688.1|1929631_1929853_-	DUF3269 family protein	NA	Q9G021	Staphylococcus_phage	100.0	1.3e-35
WP_000237153.1|1929865_1930027_-	hypothetical protein	NA	D2JGK6	Staphylococcus_phage	100.0	4.5e-22
WP_038412603.1|1930020_1930800_-	ATP-binding protein	NA	Q6R838	Staphylococcus_virus	99.2	4.2e-145
WP_000190224.1|1930809_1931580_-	conserved phage C-terminal domain-containing protein	NA	W5R8N2	Staphylococcus_phage	100.0	1.4e-116
WP_000371250.1|1931644_1932502_+	DUF4393 domain-containing protein	NA	Q4ZBL8	Staphylococcus_phage	100.0	9.5e-159
WP_031928974.1|1932607_1933282_-	phi PV83 orf 19-like protein	NA	A1KX69	Staphylococcus_virus	99.6	1.5e-130
WP_001099007.1|1933293_1933737_-	single-stranded DNA-binding protein	NA	G4KNN8	Staphylococcus_phage	100.0	1.4e-76
WP_000840496.1|1933733_1934384_-	ERF family protein	NA	A0A0F6N3I5	Staphylococcus_phage	100.0	1.1e-119
WP_001004336.1|1934384_1934921_-	host-nuclease inhibitor Gam family protein	NA	A0A0F6N4M6	Staphylococcus_phage	100.0	1.4e-80
WP_001556704.1|1934933_1935194_-	DUF1108 family protein	NA	G4KNN5	Staphylococcus_phage	100.0	2.0e-43
WP_000829613.1|1935198_1935516_-	hypothetical protein	NA	Q4ZAS8	Staphylococcus_virus	100.0	3.9e-33
WP_000048124.1|1935604_1935766_-	DUF1270 family protein	NA	C7F7L3	Staphylococcus_phage	100.0	1.9e-20
WP_000455727.1|1935779_1935989_-	hypothetical protein	NA	A0A2H4PQR1	Staphylococcus_phage	98.6	2.2e-32
WP_031925041.1|1936001_1936715_-	ORF6C domain-containing protein	NA	A0A059T7N7	Staphylococcus_phage	98.7	2.1e-127
WP_000772137.1|1936771_1936981_+	hypothetical protein	NA	A0A2I6PDR8	Staphylococcus_phage	100.0	9.1e-31
WP_000939495.1|1936973_1937114_-	hypothetical protein	NA	A0A2I6PDT8	Staphylococcus_phage	100.0	1.9e-16
WP_000435360.1|1937128_1937572_-	hypothetical protein	NA	W5R971	Staphylococcus_phage	100.0	1.5e-75
WP_000272859.1|1937584_1937833_-	helix-turn-helix transcriptional regulator	NA	A0A2K9VBT6	Staphylococcus_phage	100.0	1.7e-39
WP_001260487.1|1937996_1938320_+	helix-turn-helix transcriptional regulator	NA	A0A0H3U2V8	Staphylococcus_phage	100.0	2.0e-53
WP_000525009.1|1938332_1938794_+	hypothetical protein	NA	W5R9J0	Staphylococcus_phage	100.0	1.2e-83
WP_031790084.1|1938811_1939327_+	hypothetical protein	NA	A9CR44	Staphylococcus_phage	94.2	6.3e-41
WP_000146088.1|1939388_1940438_+|integrase	site-specific integrase	integrase	A0A2H4JB53	uncultured_Caudovirales_phage	90.3	5.2e-183
1942799:1942816	attR	TTAAATGTCATCATTTGA	NA	NA	NA	NA
>prophage 11
NZ_CP006630	Staphylococcus aureus subsp. aureus SA268 chromosome, complete genome	2833899	2672321	2708858	2833899	holin,transposase,protease	Streptococcus_phage(44.44%)	35	NA	NA
WP_001015311.1|2672321_2673002_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	1.5e-127
WP_001240982.1|2673406_2676325_-|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	36.1	1.1e-169
WP_000576156.1|2676328_2676883_-	recombinase family protein	NA	A0A0F7LA37	Escherichia_phage	52.1	2.3e-36
WP_001038790.1|2677237_2677975_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	99.6	1.4e-134
WP_001814874.1|2678099_2678183_-	23S rRNA methyltransferase attenuation leader peptide	NA	NA	NA	NA	NA
WP_001096887.1|2678724_2679519_-	aminoglycoside O-phosphotransferase APH(3')-IIIa	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
WP_001255866.1|2680088_2680997_-	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	E4ZFP8	Streptococcus_phage	100.0	2.8e-177
WP_000662263.1|2681029_2681764_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	100.0	1.5e-141
WP_000233000.1|2681744_2682614_-	nucleotidyltransferase domain-containing protein	NA	A0A1X9I6C9	Streptococcus_phage	90.7	6.7e-152
WP_000205227.1|2682628_2682853_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000136908.1|2682995_2684558_-	recombinase family protein	NA	A0A2K5B2B4	Erysipelothrix_phage	88.8	7.8e-260
WP_000323438.1|2684559_2684976_-	recombinase	NA	A0A2K5B2B3	Erysipelothrix_phage	98.6	1.2e-71
WP_002360685.1|2684976_2685273_-	hypothetical protein	NA	A0A2K5B2B2	Erysipelothrix_phage	91.8	4.6e-44
WP_001062586.1|2686477_2687080_-	recombinase family protein	NA	A0A219YA40	Aeromonas_phage	38.3	5.7e-17
WP_000713595.1|2687093_2687264_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001015311.1|2687586_2688267_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	1.5e-127
WP_038412706.1|2689007_2689688_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	98.7	6.5e-126
WP_014363485.1|2689741_2690089_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000161217.1|2690104_2691181_-|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_000621530.1|2691523_2691907_-	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_000163745.1|2691908_2692760_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_000860047.1|2692752_2693571_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	NA	NA	NA	NA
WP_000953560.1|2693643_2694504_+	oxidoreductase	NA	NA	NA	NA	NA
WP_000186117.1|2694589_2695294_-	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_000846637.1|2695571_2696531_-	L-lactate dehydrogenase	NA	NA	NA	NA	NA
WP_000534436.1|2697217_2698666_+	amino acid permease	NA	NA	NA	NA	NA
WP_000030049.1|2698745_2700083_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	26.7	1.8e-18
WP_001237630.1|2700336_2700753_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001031407.1|2700875_2701766_+	fructose bisphosphate aldolase	NA	A0A0K0KVJ8	Prochlorococcus_phage	29.2	1.2e-07
WP_001130051.1|2701960_2703457_-	malate dehydrogenase (quinone)	NA	NA	NA	NA	NA
WP_025174545.1|2703752_2704082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038412709.1|2704141_2705740_-	acyl-CoA synthetase	NA	A0A2H4PQU7	Staphylococcus_phage	36.8	2.6e-77
WP_001028780.1|2705933_2706377_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_000011688.1|2706656_2706869_-	sterile alpha motif-like domain-containing protein	NA	NA	NA	NA	NA
WP_000066521.1|2707148_2708858_-|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	32.3	3.8e-58
