The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP008953	Amycolatopsis japonica strain DSM 44213 chromosome, complete genome	8961318	4912615	4942048	8961318	plate,protease,tail,transposase	Neodiprion_sertifer_nucleopolyhedrovirus(50.0%)	27	NA	NA
WP_038509990.1|4912615_4913689_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_038515037.1|4914487_4915465_+	hypothetical protein	NA	NA	NA	NA	NA
WP_084098299.1|4915517_4916297_-|protease	serine protease	protease	Q6JKF3	Neodiprion_sertifer_nucleopolyhedrovirus	29.1	2.5e-17
WP_038515039.1|4916546_4917347_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_038515041.1|4917374_4918565_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_038515043.1|4918605_4919007_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038515044.1|4919043_4919556_-	DUF2231 domain-containing protein	NA	NA	NA	NA	NA
WP_038515046.1|4919918_4920293_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038515047.1|4920289_4921525_+	ECF subfamily RNA polymerase sigma-24 subunit	NA	NA	NA	NA	NA
WP_038515049.1|4922051_4922819_-	twin-arginine translocation pathway signal protein	NA	NA	NA	NA	NA
WP_038515051.1|4923182_4923860_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_038523672.1|4923865_4924516_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_038515053.1|4924615_4925239_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_038515054.1|4925246_4926566_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038523674.1|4927171_4931170_-	PD40 domain-containing protein	NA	NA	NA	NA	NA
WP_038515056.1|4931187_4932162_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_038515057.1|4932165_4932705_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_038515059.1|4932701_4934663_-|plate	putative baseplate assembly protein	plate	A0A1J0GW37	Streptomyces_phage	27.1	8.1e-12
WP_037344464.1|4934662_4935073_-	GPW/gp25 family protein	NA	NA	NA	NA	NA
WP_037344462.1|4935074_4935356_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_038515061.1|4935538_4937359_-	VgrG-related protein	NA	NA	NA	NA	NA
WP_038515063.1|4937351_4938116_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_016333594.1|4938118_4938565_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_038515065.1|4938576_4940997_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016333592.1|4941004_4941163_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038515067.1|4941159_4941600_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037344451.1|4941604_4942048_-|tail	phage tail protein	tail	NA	NA	NA	NA
>prophage 2
NZ_CP008953	Amycolatopsis japonica strain DSM 44213 chromosome, complete genome	8961318	5955924	5964366	8961318		Mycobacterium_phage(75.0%)	12	NA	NA
WP_038516629.1|5955924_5956839_-	AAA family ATPase	NA	A0A222YX12	Streptomyces_phage	38.6	1.9e-40
WP_051972602.1|5957038_5958115_-	hypothetical protein	NA	A0A2L1IVY6	Streptomyces_phage	41.6	2.1e-62
WP_051972603.1|5958196_5958751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038516632.1|5958747_5959068_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063777817.1|5959079_5960969_-	DNA polymerase	NA	A0A222YXX9	Mycobacterium_phage	64.2	1.3e-224
WP_038516635.1|5960984_5961230_-	helix-turn-helix domain-containing protein	NA	A0A142K6D0	Mycobacterium_phage	47.6	2.3e-09
WP_158509806.1|5961226_5961391_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038516638.1|5961390_5961594_-	hypothetical protein	NA	NA	NA	NA	NA
WP_051972604.1|5961659_5962205_-	hypothetical protein	NA	A0A222YXZ3	Mycobacterium_phage	51.7	1.1e-14
WP_038516641.1|5962369_5963002_-	hypothetical protein	NA	A0A0N9BDR2	Mycobacterium_phage	35.8	1.8e-21
WP_038516644.1|5963036_5963807_-	metallophosphoesterase	NA	A0A222YZN7	Mycobacterium_phage	67.7	2.6e-99
WP_038516646.1|5963844_5964366_-	endonuclease VII domain-containing protein	NA	A0A2H4PFM8	Mycobacterium_phage	54.4	1.2e-34
>prophage 3
NZ_CP008953	Amycolatopsis japonica strain DSM 44213 chromosome, complete genome	8961318	5977135	5990942	8961318	tail,capsid,portal	Mycobacterium_phage(66.67%)	17	NA	NA
WP_038516710.1|5977135_5977462_+	HNH endonuclease	NA	A0A1B3B0R4	Gordonia_phage	62.2	1.3e-28
WP_038516714.1|5977733_5978117_+	hypothetical protein	NA	A0A2P1CGA5	Mycobacterium_phage	46.8	1.4e-21
WP_038516717.1|5978116_5978371_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038516720.1|5978954_5979167_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038516723.1|5979180_5980869_+	hypothetical protein	NA	A0A1S5VY55	Rhodococcus_phage	69.0	4.2e-227
WP_051972607.1|5980868_5982293_+|portal	phage portal protein	portal	A0A1D8EUL2	Mycobacterium_phage	52.8	2.1e-126
WP_038516725.1|5982289_5983102_+	hypothetical protein	NA	A0A2D1G8D1	Mycobacterium_phage	49.3	2.6e-65
WP_038516727.1|5983162_5983693_+	hypothetical protein	NA	A0A2P1CFC3	Mycobacterium_phage	37.8	2.1e-07
WP_038516730.1|5983760_5984711_+|capsid	phage major capsid protein	capsid	V5R986	Arthrobacter_phage	61.8	2.0e-93
WP_038516734.1|5984953_5985361_+	hypothetical protein	NA	H9NCJ4	Mycobacterium_phage	55.3	5.0e-33
WP_038516737.1|5985357_5985714_+	hypothetical protein	NA	A0A1D8ESX7	Mycobacterium_phage	54.6	4.0e-26
WP_038516740.1|5985713_5986022_+	DUF5403 family protein	NA	G9FHK2	Rhodococcus_virus	40.4	6.5e-09
WP_038516743.1|5986047_5986440_+	hypothetical protein	NA	A0A088FRQ0	Mycobacterium_phage	56.1	2.2e-33
WP_038516747.1|5986452_5987037_+	hypothetical protein	NA	A0A088FWJ5	Mycobacterium_phage	50.5	5.7e-46
WP_038516749.1|5987156_5987528_+|tail	phage tail assembly protein	tail	A0A222ZJ68	Rhodococcus_phage	50.4	7.3e-23
WP_051972609.1|5987479_5987950_+	hypothetical protein	NA	A0A1J0MIX5	Mycobacterium_phage	46.6	5.6e-20
WP_051972610.1|5987927_5990942_+	hypothetical protein	NA	A0A222ZNE4	Mycobacterium_phage	32.1	2.7e-51
>prophage 1
NZ_CP008954	Amycolatopsis japonica strain DSM 44213 plasmid pAmyja1, complete sequence	92539	28462	36501	92539		Mycobacterium_phage(50.0%)	11	NA	NA
WP_148311769.1|28462_29986_-	hypothetical protein	NA	A0A286N2R7	Arthrobacter_phage	34.7	2.5e-61
WP_040133652.1|29942_30395_-	hypothetical protein	NA	A0A0S2MU64	Streptomyces_phage	32.0	6.4e-05
WP_040133653.1|30423_30849_-	hypothetical protein	NA	NA	NA	NA	NA
WP_051972900.1|30916_31510_-	ParB N-terminal domain-containing protein	NA	A0A0F7IM77	Mycobacterium_phage	65.8	5.9e-67
WP_040133654.1|31506_32601_-	phosphoadenosine phosphosulfate reductase family protein	NA	A0A2P1CCQ7	Mycobacterium_phage	51.8	1.5e-103
WP_148311791.1|32597_33224_-	ParB N-terminal domain-containing protein	NA	A0A222ZHK7	Arthrobacter_phage	41.6	1.9e-31
WP_158509823.1|33598_33769_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040133656.1|33956_34937_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040133657.1|34933_35143_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040133658.1|35426_35876_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040133659.1|35889_36501_+	hypothetical protein	NA	V5UP92	Mycobacterium_phage	33.1	1.6e-11
