assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000731315.1_RG540_Ch_pA	NZ_HG938353	Neorhizobium galegae bv. orientalis str. HAMBI 540 chromosome I	1	1452131-1452235	1	CRISPRCasFinder	no		csa3,WYL,DEDDh,cas3	Orphan	AAGAAGAAGGCCGCCCCGAAGAAG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DEDDh,cas3	NA,NA|177aa|down_5|NZ_HG938353.1_1457882_1458413_+,NA|79aa|down_9|NZ_HG938353.1_1462614_1462851_+	NA|217aa|up_9|NZ_HG938353.1_1441854_1442505_+	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA|540aa|up_8|NZ_HG938353.1_1442652_1444272_+	COG0739, NlpD, Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane]	NA|291aa|up_7|NZ_HG938353.1_1444345_1445218_-	COG2607, COG2607, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|123aa|up_6|NZ_HG938353.1_1445414_1445783_+	COG1862, YajC, Preprotein translocase subunit YajC [Intracellular trafficking and secretion]	NA|129aa|up_5|NZ_HG938353.1_1445884_1446271_+	COG3737, COG3737, Uncharacterized conserved protein [Function unknown]	NA|285aa|up_4|NZ_HG938353.1_1446274_1447129_+	COG1562, ERG9, Phytoene/squalene synthetase [Lipid metabolism]	NA|151aa|up_3|NZ_HG938353.1_1447248_1447701_+	cd18442, BRCT_polymerase_mu, BRCT domain of DNA-directed DNA/RNA polymerase mu (polymerase mu) and similar proteins	NA|475aa|up_2|NZ_HG938353.1_1447678_1449103_-	PRK05335, PRK05335, tRNA (uracil-5-)-methyltransferase Gid; Reviewed	NA|48aa|up_1|NZ_HG938353.1_1449250_1449394_-	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown]	NA|49aa|up_0|NZ_HG938353.1_1449643_1449790_-	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown]	NA|541aa|down_0|NZ_HG938353.1_1452344_1453967_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|280aa|down_1|NZ_HG938353.1_1454357_1455197_+	COG3773, SleB, Cell wall hydrolyses involved in spore germination [Cell envelope biogenesis, outer membrane]	NA|210aa|down_2|NZ_HG938353.1_1455207_1455837_-	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|154aa|down_3|NZ_HG938353.1_1455905_1456367_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|405aa|down_4|NZ_HG938353.1_1456440_1457655_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|177aa|down_5|NZ_HG938353.1_1457882_1458413_+	NA	NA|665aa|down_6|NZ_HG938353.1_1458543_1460538_+	COG1289, COG1289, Predicted membrane protein [Function unknown]	NA|284aa|down_7|NZ_HG938353.1_1460598_1461450_+	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|266aa|down_8|NZ_HG938353.1_1461433_1462231_+	PRK00865, PRK00865, glutamate racemase; Provisional	NA|79aa|down_9|NZ_HG938353.1_1462614_1462851_+	NA
GCF_000731315.1_RG540_Ch_pA	NZ_HG938353	Neorhizobium galegae bv. orientalis str. HAMBI 540 chromosome I	2	3189915-3190013	2	CRISPRCasFinder	no		csa3,WYL,DEDDh,cas3	Orphan	CCTTCTCCCCGCTAACGGGGAGA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DEDDh,cas3	NA|80aa|up_9|NZ_HG938353.1_3179662_3179902_-,NA|187aa|up_3|NZ_HG938353.1_3187239_3187800_+,NA	NA|80aa|up_9|NZ_HG938353.1_3179662_3179902_-	NA	NA|733aa|up_8|NZ_HG938353.1_3180342_3182541_-	COG5001, COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms]	NA|259aa|up_7|NZ_HG938353.1_3182657_3183434_-	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|223aa|up_6|NZ_HG938353.1_3183512_3184181_-	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|347aa|up_5|NZ_HG938353.1_3184170_3185211_-	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional	NA|468aa|up_4|NZ_HG938353.1_3185529_3186933_-	TIGR03356, BGL, beta-galactosidase	NA|187aa|up_3|NZ_HG938353.1_3187239_3187800_+	NA	NA|391aa|up_2|NZ_HG938353.1_3187985_3189158_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|138aa|up_1|NZ_HG938353.1_3189204_3189618_-	pfam10387, DUF2442, Protein of unknown function (DUF2442)	NA|76aa|up_0|NZ_HG938353.1_3189610_3189838_-	pfam13711, DUF4160, Domain of unknown function (DUF4160)	NA|351aa|down_0|NZ_HG938353.1_3190055_3191108_-	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|317aa|down_1|NZ_HG938353.1_3191325_3192276_-	cd06311, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems	NA|334aa|down_2|NZ_HG938353.1_3192378_3193380_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|508aa|down_3|NZ_HG938353.1_3193379_3194903_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|437aa|down_4|NZ_HG938353.1_3195173_3196484_-	PRK05474, PRK05474, xylose isomerase; Provisional	NA|485aa|down_5|NZ_HG938353.1_3196671_3198126_-	cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xylulokinase-like D-xylulose kinases; a subgroup of the FGGY family of carbohydrate kinases	NA|347aa|down_6|NZ_HG938353.1_3198151_3199192_-	cd06307, PBP1_sugar_binding, periplasmic sugar-binding domain of uncharacterized transport systems	NA|531aa|down_7|NZ_HG938353.1_3199334_3200927_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|405aa|down_8|NZ_HG938353.1_3200948_3202163_-	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|234aa|down_9|NZ_HG938353.1_3202297_3202999_+	pfam14246, TetR_C_7, AefR-like transcriptional repressor, C-terminal region
