assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000724525.1_ASM72452v1	NZ_CP008841	Klebsiella michiganensis strain M1 chromosome, complete genome	1	978765-978855	1	CRISPRCasFinder	no		csa3,RT,cas14j,cas3,DEDDh,WYL,DinG	Orphan	CCGCCTGCGATCGGGTAGCCCGGA	24	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,cas14j,cas3,DEDDh,WYL,DinG,c2c9_V-U4	NA,NA	NA|318aa|up_9|NZ_CP008841.1_969825_970779_-	PRK09393, ftrA, transcriptional activator FtrA; Provisional	NA|260aa|up_8|NZ_CP008841.1_970793_971573_-	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]	NA|185aa|up_7|NZ_CP008841.1_971742_972297_+	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|287aa|up_6|NZ_CP008841.1_972288_973149_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|270aa|up_5|NZ_CP008841.1_973173_973983_-	PRK09861, PRK09861, lipoprotein NlpA	NA|157aa|up_4|NZ_CP008841.1_974238_974709_-	pfam07080, DUF1348, Protein of unknown function (DUF1348)	NA|207aa|up_3|NZ_CP008841.1_974839_975460_-	COG3576, COG3576, Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase [General function prediction only]	NA|305aa|up_2|NZ_CP008841.1_975562_976477_+	cd08471, PBP2_CrgA_like_2, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|499aa|up_1|NZ_CP008841.1_976473_977970_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|216aa|up_0|NZ_CP008841.1_978050_978698_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|139aa|down_0|NZ_CP008841.1_978899_979316_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|375aa|down_1|NZ_CP008841.1_979769_980894_+	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA	NA|1036aa|down_2|NZ_CP008841.1_980893_984001_+	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family	NA|455aa|down_3|NZ_CP008841.1_984004_985369_+	PRK09837, PRK09837, Cu(I)/Ag(I) efflux RND transporter outer membrane protein	NA|389aa|down_4|NZ_CP008841.1_985419_986586_+	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|301aa|down_5|NZ_CP008841.1_986746_987649_+	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed	NA|478aa|down_6|NZ_CP008841.1_987673_989107_+	PRK09586, murP, PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed	NA|79aa|down_7|NZ_CP008841.1_989212_989449_+	pfam07362, CcdA, Post-segregation antitoxin CcdA	NA|103aa|down_8|NZ_CP008841.1_989451_989760_+	pfam01845, CcdB, CcdB protein	NA|301aa|down_9|NZ_CP008841.1_989910_990813_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter
GCF_000724525.1_ASM72452v1	NZ_CP008841	Klebsiella michiganensis strain M1 chromosome, complete genome	2	1628533-1628642	2	CRISPRCasFinder	no		csa3,RT,cas14j,cas3,DEDDh,WYL,DinG	Orphan	CGCCGCCTCCGGGAAGCAGCGCGCAATG	28	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,cas14j,cas3,DEDDh,WYL,DinG,c2c9_V-U4	NA,NA	NA|1259aa|up_9|NZ_CP008841.1_1615526_1619303_+	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown]	NA|115aa|up_8|NZ_CP008841.1_1619305_1619650_+	COG2105, COG2105, Uncharacterized conserved protein [Function unknown]	NA|176aa|up_7|NZ_CP008841.1_1619801_1620329_-	PRK01250, PRK01250, inorganic diphosphatase	NA|319aa|up_6|NZ_CP008841.1_1620732_1621689_+	cd06309, PBP1_galactofuranose_YtfQ-like, periplasmic binding domain of ABC-type galactofuranose YtfQ-like transport systems	NA|501aa|up_5|NZ_CP008841.1_1621798_1623301_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|342aa|up_4|NZ_CP008841.1_1623311_1624337_+	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|329aa|up_3|NZ_CP008841.1_1624323_1625310_+	PRK11618, PRK11618, inner membrane ABC transporter permease protein YjfF; Provisional	NA|333aa|up_2|NZ_CP008841.1_1625354_1626353_-	PRK09293, PRK09293, class 1 fructose-bisphosphatase	NA|458aa|up_1|NZ_CP008841.1_1626528_1627902_+	TIGR01081, mpl, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase	NA|182aa|up_0|NZ_CP008841.1_1627966_1628512_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|403aa|down_0|NZ_CP008841.1_1628764_1629973_-	pfam14486, DUF4432, Domain of unknown function (DUF4432)	NA|381aa|down_1|NZ_CP008841.1_1630300_1631443_-	cd08179, NADPH_BDH, NADPH-dependent butanol dehydrogenase involved in the butanol and ethanol formation pathway in bacteria	NA|504aa|down_2|NZ_CP008841.1_1631637_1633149_-	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|184aa|down_3|NZ_CP008841.1_1633785_1634337_-	PRK05255, PRK05255, ribosome-associated protein	NA|451aa|down_4|NZ_CP008841.1_1634431_1635784_+	PRK11040, PRK11040, peptidase PmbA; Provisional	NA|129aa|down_5|NZ_CP008841.1_1635820_1636207_+	PRK15058, PRK15058, cytochrome b562; Provisional	NA|113aa|down_6|NZ_CP008841.1_1636498_1636837_+	TIGR03582, EF_0829, PRD domain protein EF_0829/AHA_3910	NA|121aa|down_7|NZ_CP008841.1_1636848_1637211_+	TIGR03577, EF_0830, conserved hypothetical protein EF_0830/AHA_3911	NA|100aa|down_8|NZ_CP008841.1_1637213_1637513_+	TIGR03578, EF_0831, conserved hypothetical protein EF_0831/AHA_3912	NA|259aa|down_9|NZ_CP008841.1_1637534_1638311_+	TIGR03580, EF_0832, conserved hypothetical protein EF_0832/AHA_3913
GCF_000724525.1_ASM72452v1	NZ_CP008841	Klebsiella michiganensis strain M1 chromosome, complete genome	3	2703843-2703952	3	CRISPRCasFinder	no		csa3,RT,cas14j,cas3,DEDDh,WYL,DinG	Orphan	GCGCTGCGCTTACCCGGGCTACGGGT	26	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,cas14j,cas3,DEDDh,WYL,DinG,c2c9_V-U4	NA,NA	NA|331aa|up_9|NZ_CP008841.1_2691549_2692542_-	PRK10440, PRK10440, iron-enterobactin ABC transporter permease	NA|336aa|up_8|NZ_CP008841.1_2692538_2693546_-	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease	NA|414aa|up_7|NZ_CP008841.1_2693658_2694900_+	PRK10489, PRK10489, enterobactin transporter EntS	NA|706aa|up_6|NZ_CP008841.1_2695500_2697618_-	COG3325, ChiA, Chitinase [Carbohydrate transport and metabolism]	NA|320aa|up_5|NZ_CP008841.1_2697847_2698807_-	PRK10957, PRK10957, iron-enterobactin transporter periplasmic binding protein; Provisional	NA|392aa|up_4|NZ_CP008841.1_2698994_2700170_+	PRK15016, PRK15016, isochorismate synthase EntC; Provisional	NA|536aa|up_3|NZ_CP008841.1_2700179_2701787_+	PRK10946, entE, (2,3-dihydroxybenzoyl)adenylate synthase	NA|284aa|up_2|NZ_CP008841.1_2701800_2702652_+	COG1535, EntB, Isochorismate hydrolase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|252aa|up_1|NZ_CP008841.1_2702651_2703407_+	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	NA|138aa|up_0|NZ_CP008841.1_2703407_2703821_+	PRK10254, PRK10254, proofreading thioesterase EntH	NA|702aa|down_0|NZ_CP008841.1_2704329_2706435_+	PRK15015, PRK15015, carbon starvation protein CstA	NA|66aa|down_1|NZ_CP008841.1_2706490_2706688_+	COG2879, COG2879, Uncharacterized small protein [Function unknown]	NA|135aa|down_2|NZ_CP008841.1_2706684_2707089_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|98aa|down_3|NZ_CP008841.1_2707069_2707363_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|363aa|down_4|NZ_CP008841.1_2707549_2708638_-	PRK10586, PRK10586, putative oxidoreductase; Provisional	NA|501aa|down_5|NZ_CP008841.1_2708798_2710301_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|333aa|down_6|NZ_CP008841.1_2710297_2711296_+	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|355aa|down_7|NZ_CP008841.1_2711440_2712505_+	cd06305, PBP1_methylthioribose_binding-like, similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily	NA|414aa|down_8|NZ_CP008841.1_2712501_2713743_+	COG5276, COG5276, Uncharacterized conserved protein [Function unknown]	NA|400aa|down_9|NZ_CP008841.1_2713870_2715070_-	PRK09550, mtnK, methylthioribose kinase; Reviewed
GCF_000724525.1_ASM72452v1	NZ_CP008841	Klebsiella michiganensis strain M1 chromosome, complete genome	4	3054635-3054842	1,4,1	PILER-CR,CRISPRCasFinder,CRT	no		csa3,RT,cas14j,cas3,DEDDh,WYL,DinG	Orphan	GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	2,3,3	3	Orphan	csa3,RT,cas14j,cas3,DEDDh,WYL,DinG,c2c9_V-U4	NA,NA	NA|323aa|up_9|NZ_CP008841.1_3041420_3042389_-	PRK10684, PRK10684, HCP oxidoreductase, NADH-dependent; Provisional	NA|551aa|up_8|NZ_CP008841.1_3042399_3044052_-	PRK05290, PRK05290, hybrid cluster protein; Provisional	NA|300aa|up_7|NZ_CP008841.1_3044196_3045096_-	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|232aa|up_6|NZ_CP008841.1_3045221_3045917_-	PRK05420, PRK05420, aquaporin Z; Provisional	NA|553aa|up_5|NZ_CP008841.1_3046299_3047958_+	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|372aa|up_4|NZ_CP008841.1_3048133_3049249_+	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|649aa|up_3|NZ_CP008841.1_3049245_3051192_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|77aa|up_2|NZ_CP008841.1_3051259_3051490_-	PRK14998, PRK14998, cold shock-like protein CspD; Provisional	NA|106aa|up_1|NZ_CP008841.1_3051814_3052132_+	COG2127, COG2127, Uncharacterized conserved protein [Function unknown]	NA|761aa|up_0|NZ_CP008841.1_3052162_3054445_+	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|73aa|down_0|NZ_CP008841.1_3055013_3055232_-	PRK00276, infA, translation initiation factor IF-1; Validated	NA|235aa|down_1|NZ_CP008841.1_3055511_3056216_-	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|574aa|down_2|NZ_CP008841.1_3056254_3057976_-	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|589aa|down_3|NZ_CP008841.1_3057976_3059743_-	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|323aa|down_4|NZ_CP008841.1_3059857_3060826_-	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|165aa|down_5|NZ_CP008841.1_3061357_3061852_+	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|1373aa|down_6|NZ_CP008841.1_3061987_3066106_+	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|204aa|down_7|NZ_CP008841.1_3066227_3066839_+	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|448aa|down_8|NZ_CP008841.1_3066847_3068191_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|431aa|down_9|NZ_CP008841.1_3068282_3069575_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional
GCF_000724525.1_ASM72452v1	NZ_CP008841	Klebsiella michiganensis strain M1 chromosome, complete genome	5	5677246-5677399	5	CRISPRCasFinder	no		csa3,RT,cas14j,cas3,DEDDh,WYL,DinG	Orphan	CGCGGACCGGTAGCCCGGGTAAGGCGTTTACGCCGCGACCCGGGGAAAAAAGT	53	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,cas14j,cas3,DEDDh,WYL,DinG,c2c9_V-U4	NA,NA	NA|322aa|up_9|NZ_CP008841.1_5663365_5664331_+	PRK11543, gutQ, arabinose-5-phosphate isomerase GutQ	NA|515aa|up_8|NZ_CP008841.1_5664293_5665838_-	PRK05022, PRK05022, nitric oxide reductase transcriptional regulator NorR	NA|482aa|up_7|NZ_CP008841.1_5666025_5667471_+	PRK05452, PRK05452, anaerobic nitric oxide reductase flavorubredoxin; Provisional	NA|378aa|up_6|NZ_CP008841.1_5667467_5668601_+	PRK04965, PRK04965, NADH:flavorubredoxin reductase NorW	NA|338aa|up_5|NZ_CP008841.1_5669058_5670072_-	COG3376, HoxN, High-affinity nickel permease [Inorganic ion transport and metabolism]	NA|740aa|up_4|NZ_CP008841.1_5670083_5672303_-	COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]	NA|176aa|up_3|NZ_CP008841.1_5672315_5672843_-	PRK10330, PRK10330, electron transport protein HydN	NA|338aa|up_2|NZ_CP008841.1_5672977_5673991_-	cd06270, PBP1_GalS-like, ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism	NA|481aa|up_1|NZ_CP008841.1_5674247_5675690_+	PRK09796, PRK09796, PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional	NA|475aa|up_0|NZ_CP008841.1_5675716_5677141_+	PRK09852, PRK09852, cryptic 6-phospho-beta-glucosidase; Provisional	NA|162aa|down_0|NZ_CP008841.1_5677439_5677925_-	PRK11544, hycI, hydrogenase 3 maturation protease; Provisional	NA|137aa|down_1|NZ_CP008841.1_5677917_5678328_-	PRK15084, PRK15084, formate hydrogenlyase maturation protein HycH; Provisional	NA|256aa|down_2|NZ_CP008841.1_5678324_5679092_-	COG3260, COG3260, Ni,Fe-hydrogenase III small subunit [Energy production and conversion]	NA|181aa|down_3|NZ_CP008841.1_5679091_5679634_-	PRK12387, PRK12387, formate hydrogenlyase complex iron-sulfur subunit; Provisional	NA|570aa|down_4|NZ_CP008841.1_5679643_5681353_-	COG3261, HycE, Ni,Fe-hydrogenase III large subunit [Energy production and conversion]	NA|308aa|down_5|NZ_CP008841.1_5681370_5682294_-	COG0650, HyfC, Formate hydrogenlyase subunit 4 [Energy production and conversion]	NA|609aa|down_6|NZ_CP008841.1_5682296_5684123_-	PRK08042, PRK08042, formate hydrogenlyase subunit 3; Reviewed	NA|203aa|down_7|NZ_CP008841.1_5684119_5684728_-	cd10554, HycB_like, HycB, HydN and similar proteins	NA|150aa|down_8|NZ_CP008841.1_5684810_5685260_-	PRK10198, PRK10198, formate hydrogenlyase regulator HycA	NA|115aa|down_9|NZ_CP008841.1_5685468_5685813_+	PRK03681, hypA, hydrogenase/urease nickel incorporation protein HypA
