The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP006819	Streptococcus thermophilus ASCC 1275 chromosome, complete genome	1845495	73110	81132	1845495	transposase,integrase	Staphylococcus_phage(50.0%)	7	70468:70482	75765:75779
70468:70482	attL	TTTAATAAAATAGTA	NA	NA	NA	NA
WP_024704243.1|73110_73566_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	33.8	3.9e-10
WP_024704245.1|73929_74451_-|integrase	tyrosine-type recombinase/integrase	integrase	D2XR58	Bacillus_phage	36.7	3.4e-18
WP_003331352.1|74479_74776_-	DUF4298 domain-containing protein	NA	NA	NA	NA	NA
WP_003726380.1|75482_75842_+	winged helix-turn-helix transcriptional regulator	NA	E4ZFI8	Streptococcus_phage	48.2	5.4e-23
75765:75779	attR	TACTATTTTATTAAA	NA	NA	NA	NA
WP_001291323.1|75838_77956_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	62.7	3.1e-235
WP_037623256.1|78321_78930_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	34.1	1.2e-19
WP_024704247.1|79536_81132_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	49.6	2.4e-123
>prophage 2
NZ_CP006819	Streptococcus thermophilus ASCC 1275 chromosome, complete genome	1845495	167682	183254	1845495	tRNA	Streptococcus_phage(30.0%)	15	NA	NA
WP_011681757.1|167682_168312_-	hypothetical protein	NA	Q4Z8Z7	Staphylococcus_phage	45.2	3.6e-22
WP_011226701.1|168551_169106_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0E3XCL7	Enterococcus_phage	42.2	3.1e-25
WP_002952279.1|169409_170204_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_002947774.1|170196_171039_-	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.2	2.1e-17
WP_002947776.1|171014_171845_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	31.3	4.5e-20
WP_024704275.1|171857_172400_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_011681760.1|172412_173270_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_024704276.1|173328_174606_-	insulinase family protein	NA	A0A167R9K4	Powai_lake_megavirus	28.1	1.3e-21
WP_024704277.1|174607_175858_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	39.9	5.0e-92
WP_148301643.1|175936_176326_+	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	68.4	2.9e-22
WP_024704278.1|176315_177416_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_011227627.1|177584_179066_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.3	6.8e-96
WP_011681763.1|179242_180265_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_011681764.1|180692_181565_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	33.6	4.8e-33
WP_011226709.1|181631_183254_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	25.3	5.4e-46
>prophage 3
NZ_CP006819	Streptococcus thermophilus ASCC 1275 chromosome, complete genome	1845495	783268	796317	1845495		Streptococcus_phage(77.78%)	12	NA	NA
WP_004197422.1|783268_784270_+	catabolite control protein A	NA	C6ZCU4	Enterobacteria_phage	27.3	3.7e-21
WP_014608125.1|784328_784526_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011680937.1|785408_786524_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	99.6	5.2e-157
WP_011680938.1|786570_787026_-	YueI family protein	NA	W6LLD2	Streptococcus_phage	98.0	2.2e-77
WP_011680939.1|787234_788539_+	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	99.5	1.4e-246
WP_011680940.1|788690_788876_-	hypothetical protein	NA	W6LMT3	Streptococcus_phage	96.7	3.0e-25
WP_002947233.1|789037_791224_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	99.2	0.0e+00
WP_024009810.1|791385_792549_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	99.2	1.7e-219
WP_002947238.1|792545_793223_+	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	100.0	1.9e-122
WP_011680943.1|793212_794070_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_011680944.1|794082_795150_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_011225712.1|795150_796317_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	34.9	1.6e-39
>prophage 4
NZ_CP006819	Streptococcus thermophilus ASCC 1275 chromosome, complete genome	1845495	908399	917324	1845495		Bacillus_phage(50.0%)	8	NA	NA
WP_002948474.1|908399_909005_+	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	33.7	8.0e-19
WP_011227085.1|909099_910350_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	52.1	2.0e-96
WP_014608183.1|910356_911334_+	nucleoid-associated protein	NA	NA	NA	NA	NA
WP_014621429.1|911335_911947_+	lysozyme family protein	NA	A0A223LKM8	Bacillus_phage	41.0	4.6e-22
WP_011681019.1|911979_913719_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.2	2.6e-46
WP_011681020.1|913708_915457_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.9	7.1e-52
WP_002885174.1|915633_915765_+	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA	NA
WP_011681022.1|915773_917324_+	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9KZV5	Tupanvirus	29.3	2.0e-42
>prophage 5
NZ_CP006819	Streptococcus thermophilus ASCC 1275 chromosome, complete genome	1845495	921686	993969	1845495	tRNA,transposase,integrase	Streptococcus_phage(44.44%)	62	926349:926366	934144:934161
WP_014621434.1|921686_924323_-	calcium-translocating P-type ATPase, PMCA-type	NA	M1HK51	Paramecium_bursaria_Chlorella_virus	29.2	2.8e-84
WP_014608193.1|924499_926218_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	36.2	2.1e-27
926349:926366	attL	GATTTTAGAGGGAAATAT	NA	NA	NA	NA
WP_014727422.1|926637_926799_-	hypothetical protein	NA	A3F673	Streptococcus_phage	45.0	2.0e-06
WP_014727423.1|927282_927558_-	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	45.2	7.8e-14
WP_024704073.1|927574_927760_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024704074.1|928057_929563_-	DNA primase family protein	NA	Q9AZI5	Lactococcus_phage	35.7	2.2e-62
WP_024704075.1|929552_930413_-	primase alpha helix C-terminal domain-containing protein	NA	A0A1X9I6L2	Streptococcus_phage	62.5	3.1e-101
WP_011227098.1|930427_930700_-	MerR family transcriptional regulator	NA	A0A1X9I5U9	Streptococcus_phage	50.6	1.4e-18
WP_024704076.1|930942_931179_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024704077.1|931192_931387_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024704078.1|931390_931684_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014608200.1|931922_932120_-	helix-turn-helix transcriptional regulator	NA	A0A1X9I5U5	Streptococcus_phage	67.7	1.9e-17
WP_014608201.1|932282_932795_+	helix-turn-helix transcriptional regulator	NA	A0A286QPK5	Streptococcus_phage	52.8	4.0e-19
WP_011227104.1|932877_934044_+|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	69.3	1.9e-154
WP_002948199.1|934159_934495_+	hypothetical protein	NA	NA	NA	NA	NA
934144:934161	attR	GATTTTAGAGGGAAATAT	NA	NA	NA	NA
WP_002950451.1|934823_937073_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_014621437.1|937261_938137_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
WP_024704080.1|938276_939995_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	83.0	2.9e-271
WP_011681047.1|940077_940650_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_014608202.1|940677_941223_-	phosphopantothenoylcysteine decarboxylase	NA	A0A1V0S7W6	Shearwaterpox_virus	35.6	4.4e-24
WP_002948206.1|941215_941899_-	phosphopantothenate--cysteine ligase	NA	NA	NA	NA	NA
WP_024704082.1|942092_943763_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
WP_014621440.1|944612_944912_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014621441.1|944989_945313_+	hypothetical protein	NA	NA	NA	NA	NA
WP_148301644.1|945320_945497_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014621443.1|945516_946032_+	sensor histidine kinase	NA	Q8QNA2	Ectocarpus_siliculosus_virus	29.8	1.1e-05
WP_087009847.1|946132_947702_+|transposase	IS3-like element ISSth1b family transposase	transposase	A0A0C5AC89	Paenibacillus_phage	50.9	2.0e-53
WP_014621445.1|947893_949105_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	73.4	1.0e-166
WP_011681050.1|949463_950534_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011681051.1|950651_952190_+	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA	NA
WP_024704321.1|953014_957871_+	S8 family serine peptidase	NA	A0A217EQY2	Bacillus_phage	27.7	4.3e-06
WP_011681055.1|959740_960997_+|transposase	ISL3-like element ISSth1 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	71.0	9.0e-166
WP_002947597.1|961096_961333_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_002950487.1|961401_962322_-	type I pantothenate kinase	NA	A0A1B1ISL9	uncultured_Mediterranean_phage	36.6	3.8e-36
WP_002950490.1|962644_963235_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_002950496.1|965186_965585_+	cytidine deaminase	NA	NA	NA	NA	NA
WP_024704314.1|965653_966718_+	BMP family ABC transporter substrate-binding protein	NA	A0A0A7DN02	Lactobacillus_phage	38.1	2.3e-53
WP_024704315.1|966831_968370_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.4	1.5e-16
WP_002950506.1|968362_969430_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011681056.1|969431_970388_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011681057.1|970491_971127_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	60.5	4.5e-73
WP_014608206.1|971221_973708_+	bifunctional DnaQ family exonuclease/ATP-dependent helicase	NA	A0A1X9I5C8	Streptococcus_phage	47.6	1.5e-212
WP_011681058.1|973852_974335_+	DUF5590 domain-containing protein	NA	NA	NA	NA	NA
WP_004197254.1|974339_975521_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_011681059.1|975557_976904_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	31.8	1.9e-57
WP_014608211.1|977871_978078_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	55.9	2.9e-13
WP_002950526.1|978419_978800_+	RidA family protein	NA	NA	NA	NA	NA
WP_024704316.1|978974_979628_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	55.9	9.7e-63
WP_014608213.1|979627_980071_+	6-carboxytetrahydropterin synthase QueD	NA	J9PV91	Bacillus_phage	56.3	3.5e-40
WP_014608214.1|980063_980780_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	46.9	3.4e-61
WP_014608215.1|980899_981391_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	56.7	1.8e-45
WP_014608216.1|982211_982400_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014621466.1|982604_983375_+	DUF1003 domain-containing protein	NA	NA	NA	NA	NA
WP_011225838.1|983355_984246_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	28.9	3.3e-05
WP_014621467.1|984242_985217_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	73.8	4.0e-137
WP_002945081.1|985213_986125_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	64.7	7.1e-104
WP_002944716.1|987435_987636_+	cold shock domain-containing protein	NA	A0A1X9IGI9	Lactococcus_phage	53.1	1.1e-12
WP_014621469.1|987915_988116_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	90.9	3.4e-27
WP_106693466.1|988374_989945_-|transposase	IS3-like element ISSth1b family transposase	transposase	A0A0C5AC89	Paenibacillus_phage	50.9	2.0e-53
WP_038694590.1|990139_991315_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	28.0	4.8e-36
WP_187288158.1|991544_991685_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024704322.1|991878_993969_-	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	32.7	2.3e-65
>prophage 6
NZ_CP006819	Streptococcus thermophilus ASCC 1275 chromosome, complete genome	1845495	1667221	1719744	1845495	bacteriocin,protease,transposase,tRNA	Bacillus_virus(23.08%)	56	NA	NA
WP_014608641.1|1667221_1668664_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_014608642.1|1668663_1670130_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_002884769.1|1670129_1670432_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_024010053.1|1670571_1670826_-	glycosyl transferase	NA	NA	NA	NA	NA
WP_080998437.1|1670838_1671048_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_165813972.1|1671363_1672776_-	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
WP_024703984.1|1672957_1673467_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_024703985.1|1673478_1674327_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002946999.1|1674450_1675002_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	40.3	2.6e-24
WP_002951720.1|1675064_1675850_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_002951721.1|1676109_1677324_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_002946987.1|1677678_1678131_+	universal stress protein	NA	NA	NA	NA	NA
WP_011681546.1|1678953_1679127_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681547.1|1679187_1679562_-	membrane protein	NA	NA	NA	NA	NA
WP_002946980.1|1679773_1680574_-	pyruvate formate lyase-activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	31.8	2.9e-24
WP_157821721.1|1680761_1680890_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_024703987.1|1681569_1682901_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_024703988.1|1683014_1683797_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.0	7.7e-14
WP_011681548.1|1684418_1686485_-	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_011226461.1|1686493_1686736_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011226462.1|1686732_1687281_-	SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	44.1	3.5e-37
WP_011226463.1|1687277_1688222_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	48.3	8.6e-36
WP_011681549.1|1688306_1689383_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_011681550.1|1689360_1689858_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	28.8	1.1e-13
WP_081005005.1|1689891_1690440_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_011226467.1|1690581_1691502_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	52.0	4.7e-87
WP_014621911.1|1691567_1691792_-	DUF4059 family protein	NA	NA	NA	NA	NA
WP_014608652.1|1692006_1692750_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.5	1.2e-29
WP_100284797.1|1692749_1693496_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014608653.1|1693883_1694714_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_002947030.1|1695173_1695407_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014608654.1|1695704_1696808_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_011226473.1|1697086_1699396_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	32.4	8.1e-112
WP_011681555.1|1699662_1700445_+	carbonic anhydrase family protein	NA	NA	NA	NA	NA
WP_014608655.1|1700495_1700948_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_014621914.1|1701298_1701604_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_011681558.1|1702581_1703337_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_024703990.1|1703333_1703984_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.0	3.7e-22
WP_024703991.1|1704186_1705143_-	serine hydrolase	NA	NA	NA	NA	NA
WP_011681560.1|1705142_1705898_-	CppA family protein	NA	NA	NA	NA	NA
WP_014608659.1|1706179_1706542_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002951781.1|1706628_1707492_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	34.4	3.9e-27
WP_011681561.1|1707612_1709880_+	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA	NA
WP_002951783.1|1709959_1710340_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002945924.1|1710464_1710728_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004197070.1|1711049_1711346_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_011681562.1|1711510_1711717_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681563.1|1711747_1712437_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_106693466.1|1712630_1714200_+|transposase	IS3-like element ISSth1b family transposase	transposase	A0A0C5AC89	Paenibacillus_phage	50.9	2.0e-53
WP_014608660.1|1714346_1714601_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014608662.1|1716257_1716488_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_011681569.1|1716843_1717044_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681570.1|1717062_1717239_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002948869.1|1717493_1718225_+	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	20.9	5.9e-08
WP_024703993.1|1718224_1719565_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_011681573.1|1719582_1719744_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
