The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP006986	Rhizobium sp. IE4771 chromosome, complete genome	4475387	1573819	1583218	4475387		Aeromonas_phage(14.29%)	9	NA	NA
WP_038688083.1|1573819_1575118_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	50.8	3.2e-97
WP_003547190.1|1575127_1575604_+	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_038688086.1|1575607_1576927_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	37.0	2.5e-33
WP_038688088.1|1576926_1577538_+	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	36.1	2.6e-17
WP_038688090.1|1577826_1578696_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	59.0	2.2e-94
WP_038688092.1|1578705_1579593_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_038688094.1|1579599_1580652_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	51.9	1.1e-95
WP_038688096.1|1580658_1581237_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A218MN57	uncultured_virus	43.4	2.4e-33
WP_038688098.1|1581226_1583218_-	hypothetical protein	NA	A0A0G2Y9S0	Acanthamoeba_polyphaga_mimivirus	26.9	6.7e-06
>prophage 2
NZ_CP006986	Rhizobium sp. IE4771 chromosome, complete genome	4475387	1894878	1905344	4475387	tRNA	uncultured_Mediterranean_phage(90.0%)	12	NA	NA
WP_038692488.1|1894878_1895892_+	beta-N-acetylhexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	41.9	1.4e-23
WP_038688483.1|1895910_1896768_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	37.2	1.6e-33
WP_038688485.1|1896764_1897469_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	47.6	7.3e-40
WP_038688487.1|1897651_1897843_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	72.1	6.8e-09
WP_038688490.1|1897894_1898512_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_038688492.1|1898508_1899336_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	42.8	1.1e-42
WP_038688494.1|1899435_1900719_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	46.0	4.4e-99
WP_038688496.1|1900723_1901497_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	30.2	2.4e-23
WP_038688498.1|1901493_1902147_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	36.3	1.1e-16
WP_038688500.1|1902286_1903867_+	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV24	Clostridium_phage	29.2	1.5e-11
WP_009990833.1|1903921_1904794_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_038688504.1|1904996_1905344_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.2	2.4e-12
>prophage 3
NZ_CP006986	Rhizobium sp. IE4771 chromosome, complete genome	4475387	2180621	2190780	4475387		uncultured_Mediterranean_phage(83.33%)	9	NA	NA
WP_038688898.1|2180621_2183543_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	62.1	0.0e+00
WP_038688900.1|2183824_2184337_+	single-stranded DNA-binding protein	NA	R9TP78	Rhizobium_phage	56.5	1.4e-45
WP_038688903.1|2184422_2185070_-	MarC family protein	NA	NA	NA	NA	NA
WP_038688905.1|2185307_2188130_+	DNA gyrase subunit A	NA	A0A1B1IVS2	uncultured_Mediterranean_phage	41.9	6.7e-76
WP_003539654.1|2188450_2188606_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038688907.1|2188737_2189028_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038688909.1|2189118_2189613_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	37.2	2.3e-24
WP_038688912.1|2189669_2190242_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	52.6	4.9e-42
WP_004671916.1|2190270_2190780_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	58.8	1.2e-44
>prophage 4
NZ_CP006986	Rhizobium sp. IE4771 chromosome, complete genome	4475387	3253371	3314895	4475387	transposase,tRNA,holin,protease	Bacillus_phage(25.0%)	59	NA	NA
WP_038690366.1|3253371_3254103_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_038690368.1|3254099_3254561_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_038690370.1|3254568_3254880_-|protease	ATP-dependent Clp protease adapter ClpS	protease	NA	NA	NA	NA
WP_038690372.1|3255205_3256309_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_038690374.1|3256328_3257408_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038690376.1|3257602_3258085_+	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_038690378.1|3258081_3258549_+	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010058411.1|3258576_3259122_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.1	6.1e-34
WP_038690380.1|3259396_3260278_-	cytochrome c1	NA	NA	NA	NA	NA
WP_038690382.1|3260303_3261584_-	cytochrome b N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_009982651.1|3261598_3262177_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_038690385.1|3262463_3263396_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_038690388.1|3263351_3265265_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.9	2.1e-28
WP_038692728.1|3265426_3265657_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038692730.1|3265751_3267608_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	31.4	4.2e-34
WP_038690390.1|3267992_3268454_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_038690392.1|3268650_3270297_+	Na/Pi cotransporter family protein	NA	NA	NA	NA	NA
WP_038690394.1|3270300_3270561_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038690396.1|3270738_3271650_+	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_038690398.1|3271753_3272017_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010029983.1|3272131_3272317_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_038690400.1|3272388_3273654_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	K4JS34	Caulobacter_phage	34.3	3.4e-43
WP_038690402.1|3273650_3274301_-	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_038690404.1|3274297_3274921_-	DUF1285 domain-containing protein	NA	NA	NA	NA	NA
WP_038690406.1|3275079_3276090_+	MoxR family ATPase	NA	NA	NA	NA	NA
WP_038690408.1|3276103_3277024_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_038690410.1|3277020_3279837_+	DUF4159 domain-containing protein	NA	NA	NA	NA	NA
WP_038690412.1|3279838_3281911_+	membrane protein	NA	NA	NA	NA	NA
WP_038690414.1|3281915_3282332_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_077990043.1|3282332_3282896_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_038690416.1|3283124_3284111_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_009991784.1|3284117_3284597_-	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_038690418.1|3284667_3285576_+	metallophosphoesterase	NA	NA	NA	NA	NA
WP_038690420.1|3285732_3286293_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038690422.1|3286479_3286989_+	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_038690424.1|3286990_3287833_+	anti-sigma factor	NA	NA	NA	NA	NA
WP_038687419.1|3288150_3289296_-|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_038690426.1|3289541_3291266_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_038690428.1|3291652_3292852_-	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_038690430.1|3293040_3293625_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	37.9	7.4e-30
WP_038690432.1|3293854_3294631_+	DUF2076 domain-containing protein	NA	NA	NA	NA	NA
WP_038690434.1|3294776_3295241_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	49.6	1.7e-29
WP_038690436.1|3295240_3296155_-	CDF family cation efflux transporter EmfA	NA	NA	NA	NA	NA
WP_038690438.1|3296363_3297035_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010056092.1|3297049_3297289_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038690441.1|3297386_3299576_-	anthranilate synthase	NA	NA	NA	NA	NA
WP_038690443.1|3299841_3302100_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_038690445.1|3302326_3303334_+	extensin family protein	NA	NA	NA	NA	NA
WP_038690447.1|3303416_3303662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038690449.1|3303995_3305675_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
WP_080710984.1|3305831_3306362_+	TIGR00645 family protein	NA	NA	NA	NA	NA
WP_038690451.1|3306358_3307327_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038690454.1|3307634_3308360_+	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010058568.1|3308455_3309586_-	DUF2333 family protein	NA	NA	NA	NA	NA
WP_038690456.1|3309823_3310897_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010057131.1|3311130_3311733_-	thymidine kinase	NA	A0A0K1LPF6	Klebsiella_phage	55.8	1.6e-51
WP_010057129.1|3311969_3312926_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_038690458.1|3313000_3313846_+|holin	choline ABC transporter permease subunit	holin	NA	NA	NA	NA
WP_038690460.1|3313842_3314895_+|holin	choline ABC transporter ATP-binding protein	holin	G3M9Y6	Bacillus_virus	30.8	5.7e-20
>prophage 5
NZ_CP006986	Rhizobium sp. IE4771 chromosome, complete genome	4475387	4031395	4042806	4475387	transposase	Mycobacterium_phage(25.0%)	10	NA	NA
WP_038691503.1|4031395_4032106_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2P1JXV3	Rhodococcus_phage	48.2	3.0e-49
WP_038691505.1|4032105_4032462_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_038691507.1|4032458_4033187_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	39.0	2.8e-42
WP_010058992.1|4033199_4034423_-	adenylate/guanylate cyclase domain-containing protein	NA	M1HLN3	Pelagibacter_phage	28.8	7.0e-14
WP_010058993.1|4034525_4035500_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	74.4	3.3e-139
WP_038691509.1|4035680_4037858_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	51.7	1.1e-211
WP_010056487.1|4037836_4038241_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A142F1R4	Bacillus_phage	46.6	7.7e-18
WP_003582512.1|4038253_4038475_-	glutaredoxin-like protein NrdH	NA	V5UN81	Mycobacterium_phage	53.4	3.6e-17
WP_038687419.1|4039271_4040417_+|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_038691512.1|4040574_4042806_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	40.5	5.2e-124
