The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP006740	Xylella fastidiosa MUL0034, complete genome	2642186	221797	269756	2642186	plate,integrase,capsid,protease,tail,portal	Escherichia_phage(23.81%)	53	214107:214121	270132:270146
214107:214121	attL	GTTGCTGTGTATCAG	NA	NA	NA	NA
WP_004089328.1|221797_223132_-|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_004089326.1|223158_224343_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_027700423.1|224345_225200_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_038228785.1|225196_225964_-	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	34.8	7.3e-17
WP_004089320.1|225966_226524_-	ribosome recycling factor	NA	NA	NA	NA	NA
WP_038228786.1|227319_228663_-	outer membrane protein transport protein	NA	NA	NA	NA	NA
WP_004089316.1|228894_229575_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_004089314.1|229693_230014_+	DUF1820 family protein	NA	NA	NA	NA	NA
WP_038230128.1|231233_231965_-	UMP kinase	NA	NA	NA	NA	NA
WP_155266588.1|232270_232414_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038230130.1|232410_232659_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038230133.1|233360_234020_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA	NA
WP_038230135.1|234116_236033_-	phosphogluconate dehydratase	NA	NA	NA	NA	NA
WP_038230136.1|236173_236893_-	6-phosphogluconolactonase	NA	NA	NA	NA	NA
WP_038230138.1|236889_237903_-	glucokinase	NA	NA	NA	NA	NA
WP_038230140.1|237899_239333_-	glucose-6-phosphate dehydrogenase	NA	A0A222YYZ2	Synechococcus_phage	34.4	2.6e-68
WP_040123336.1|239661_240756_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	32.4	7.2e-26
WP_004089294.1|240900_241704_-	folate-binding protein YgfZ	NA	NA	NA	NA	NA
WP_011097601.1|242018_242237_+	DUF1674 domain-containing protein	NA	NA	NA	NA	NA
WP_038230145.1|242294_242690_+	succinate dehydrogenase, cytochrome b556 subunit	NA	NA	NA	NA	NA
WP_040123070.1|242686_243070_+	succinate dehydrogenase, hydrophobic membrane anchor protein	NA	NA	NA	NA	NA
WP_040123071.1|243077_244868_+	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA	NA
WP_004089282.1|244888_245674_+	succinate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_004089280.1|245794_246043_+	succinate dehydrogenase assembly factor 2	NA	NA	NA	NA	NA
WP_051606190.1|246065_246446_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038230151.1|246471_247713_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_140161045.1|247744_248428_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	37.0	7.6e-34
WP_038230158.1|248775_251253_+	DNA internalization-related competence protein ComEC/Rec2	NA	M1PSD2	Streptococcus_phage	34.3	1.4e-05
WP_004085189.1|251237_251900_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_004089267.1|251904_252342_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_004089264.1|252359_254108_+	lipid A export permease/ATP-binding protein MsbA	NA	W8CYL7	Bacillus_phage	29.4	3.9e-50
WP_038230156.1|254104_255124_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_080679715.1|255530_256253_-	phage late control D family protein	NA	A0A088FRU7	Escherichia_phage	40.7	6.1e-50
WP_040123072.1|256137_257109_-	hypothetical protein	NA	V9IQX0	Stenotrophomonas_phage	46.8	7.7e-64
WP_040123338.1|257116_257674_-|tail	phage tail protein I	tail	V9IQK7	Stenotrophomonas_phage	55.0	2.3e-52
WP_040123073.1|257666_258560_-|plate	baseplate assembly protein	plate	V9IQV9	Stenotrophomonas_phage	46.4	6.6e-70
WP_004088650.1|258559_258898_-|plate	phage baseplate protein	plate	A0A088FV58	Escherichia_phage	61.3	2.4e-33
WP_004086967.1|259046_259310_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
WP_038230161.1|259296_259578_+	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA	NA
WP_027700438.1|259614_260202_-|plate	phage baseplate assembly protein V	plate	NA	NA	NA	NA
WP_040123074.1|260198_260741_-	hypothetical protein	NA	A0A1W6JT55	Escherichia_phage	41.6	3.2e-35
WP_038230165.1|260716_261238_-	hypothetical protein	NA	D5LGZ7	Escherichia_phage	34.9	7.4e-13
WP_027700441.1|261234_261558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_027700442.1|261557_261818_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123075.1|261835_263710_-|capsid	phage major capsid protein	capsid	V5YSS9	Pseudomonas_phage	48.1	6.9e-162
WP_040123076.1|263706_264339_-|portal	phage portal protein	portal	A0A088FVG5	Escherichia_phage	51.7	5.6e-47
WP_038230623.1|264344_264854_+	hypothetical protein	NA	C8CLG0	Xylella_phage	95.7	4.0e-88
WP_004085028.1|264850_265129_+	VRR-NUC domain-containing protein	NA	C8CLF9	Xylella_phage	96.7	1.9e-44
WP_040123340.1|265130_265439_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123077.1|265523_266942_+	DEAD/DEAH box helicase	NA	C8CLF7	Xylella_phage	98.3	1.0e-274
WP_016024069.1|267094_267352_+	DUF4224 domain-containing protein	NA	C8CLF5	Xylella_phage	100.0	9.8e-43
WP_038230604.1|267341_268361_+|integrase	tyrosine-type recombinase/integrase	integrase	C8CLF4	Xylella_phage	88.2	4.6e-168
WP_038228792.1|269114_269756_+	ParA family protein	NA	A0A142F1W4	Mycobacterium_phage	39.7	1.2e-12
270132:270146	attR	CTGATACACAGCAAC	NA	NA	NA	NA
>prophage 2
NZ_CP006740	Xylella fastidiosa MUL0034, complete genome	2642186	550644	661511	2642186	plate,terminase,integrase,capsid,protease,tail,portal,tRNA	Xylella_phage(25.49%)	114	564394:564409	584350:584365
WP_024749251.1|550644_551415_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_004090663.1|551411_552074_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_038229079.1|552575_553793_+	tryptophan synthase subunit beta	NA	NA	NA	NA	NA
WP_038229054.1|553918_554725_+	tryptophan synthase subunit alpha	NA	NA	NA	NA	NA
WP_027700018.1|554933_556325_-	DNA repair protein RadA	NA	NA	NA	NA	NA
WP_038229056.1|556507_557473_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_004083818.1|557673_558153_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038229058.1|558275_560078_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.1	2.9e-80
WP_004090677.1|560257_560800_-	DNA starvation/stationary phase protection protein	NA	A0A2H4N7L5	Lake_Baikal_phage	36.1	5.5e-19
WP_038229060.1|560893_565294_+	DUF3418 domain-containing protein	NA	A0A1V0SBU4	Catovirus	26.6	1.1e-45
564394:564409	attL	CCGTTTTGGCAGCCAC	NA	NA	NA	NA
WP_040123094.1|565306_566782_-	PhoPQ-regulated protein	NA	NA	NA	NA	NA
WP_038229064.1|567199_570142_+	aminomethyl-transferring glycine dehydrogenase	NA	M4QFZ1	Prochlorococcus_phage	51.6	3.2e-262
WP_004090681.1|570705_571767_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	56.9	3.0e-101
WP_004090683.1|571778_572015_-	DUF4224 domain-containing protein	NA	A0A2H4JF29	uncultured_Caudovirales_phage	54.4	6.5e-09
WP_040123095.1|572011_573406_-	DEAD/DEAH box helicase	NA	C8CLF7	Xylella_phage	96.1	4.4e-262
WP_040123096.1|573490_573907_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038230497.1|573908_574187_-	VRR-NUC domain-containing protein	NA	C8CLF9	Xylella_phage	95.6	7.3e-44
WP_040123097.1|574183_576364_-	DNA polymerase	NA	C8CLG0	Xylella_phage	94.2	0.0e+00
WP_155266612.1|576365_577523_-	hypothetical protein	NA	C8CLG1	Xylella_phage	93.4	7.0e-205
WP_040123098.1|577648_578215_-	DUF2815 family protein	NA	C8CLG2	Xylella_phage	95.2	1.7e-100
WP_040123099.1|578211_579492_-	DUF2800 domain-containing protein	NA	C8CLG3	Xylella_phage	98.1	3.0e-241
WP_040123100.1|579488_579986_-	hypothetical protein	NA	C8CLG4	Xylella_phage	93.4	1.9e-50
WP_004086187.1|579975_580170_-	hypothetical protein	NA	C8CLG5	Xylella_phage	98.4	1.6e-26
WP_040123101.1|580201_580396_-	hypothetical protein	NA	C8CLG6	Xylella_phage	81.2	1.6e-21
WP_040123102.1|580392_580794_-	hypothetical protein	NA	C8CLG7	Xylella_phage	66.9	8.1e-44
WP_040123103.1|580793_581255_-	DUF1566 domain-containing protein	NA	NA	NA	NA	NA
WP_040123104.1|581251_581767_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123105.1|581763_582297_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123106.1|583104_583875_-	helix-turn-helix transcriptional regulator	NA	C8CLH0	Xylella_phage	40.7	9.5e-33
WP_014607787.1|583948_584149_+	Rha family transcriptional regulator	NA	NA	NA	NA	NA
WP_040123107.1|584145_584451_-	hypothetical protein	NA	NA	NA	NA	NA
584350:584365	attR	GTGGCTGCCAAAACGG	NA	NA	NA	NA
WP_080703211.1|584682_584931_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004085135.1|585070_585259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040123109.1|585255_585504_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040123111.1|585784_586378_+	hypothetical protein	NA	C8CLH5	Xylella_phage	55.9	1.8e-47
WP_040123112.1|586513_589060_+	DNA primase	NA	C8CLH6	Xylella_phage	97.4	0.0e+00
WP_038230188.1|589505_590123_+	hypothetical protein	NA	V5YTF6	Pseudomonas_phage	48.8	2.4e-26
WP_040123113.1|590089_590584_+	lysozyme	NA	I2GUG4	Acinetobacter_phage	51.4	1.2e-25
WP_011097940.1|590594_590906_+	hypothetical protein	NA	A0A172PZR6	Pseudomonas_phage	44.0	7.0e-19
WP_040123114.1|590895_591357_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038230183.1|591358_591583_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050765486.1|591755_592289_+	DNA-packaging protein	NA	A0A193GYK5	Enterobacter_phage	58.6	5.2e-46
WP_038230181.1|592281_594234_+|terminase	phage terminase large subunit family protein	terminase	A0A088FQV3	Escherichia_phage	66.5	3.5e-249
WP_038230179.1|594237_594789_+	hypothetical protein	NA	V5YTG8	Pseudomonas_phage	51.7	2.6e-40
WP_040123115.1|594785_596372_+|portal	phage portal protein	portal	A0A088FVG5	Escherichia_phage	51.3	3.1e-131
WP_040123116.1|596368_598243_+|capsid	phage major capsid protein	capsid	V5YSS9	Pseudomonas_phage	48.3	6.3e-163
WP_027700442.1|598260_598521_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027700441.1|598520_598844_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038230165.1|598840_599362_+	hypothetical protein	NA	D5LGZ7	Escherichia_phage	34.9	7.4e-13
WP_038230164.1|599337_599880_+	hypothetical protein	NA	A0A1W6JT55	Escherichia_phage	42.6	9.0e-38
WP_040123117.1|599876_600464_+|plate	phage baseplate assembly protein V	plate	NA	NA	NA	NA
WP_004090697.1|600532_600934_-	type II toxin-antitoxin system MqsA family antitoxin	NA	NA	NA	NA	NA
WP_038230541.1|600936_601239_-	type II toxin-antitoxin system MqsR family toxin	NA	NA	NA	NA	NA
WP_004085172.1|601326_601602_-	HigA family addiction module antidote protein	NA	NA	NA	NA	NA
WP_004085174.1|601612_601894_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A0M3LQB1	Mannheimia_phage	45.2	1.6e-14
WP_038210500.1|602091_602430_+|plate	phage baseplate protein	plate	A0A088FV58	Escherichia_phage	60.4	2.1e-32
WP_040123118.1|602429_603323_+|plate	baseplate assembly protein	plate	V9IQV9	Stenotrophomonas_phage	46.4	1.1e-69
WP_040123345.1|603315_603873_+|tail	phage tail protein I	tail	V9IQK7	Stenotrophomonas_phage	54.4	5.1e-52
WP_040123119.1|603880_605473_+	hypothetical protein	NA	V9IQX0	Stenotrophomonas_phage	36.1	9.3e-83
WP_040123120.1|605537_606716_+|tail	phage tail sheath family protein	tail	A0A088FVH5	Escherichia_phage	55.2	3.5e-135
WP_027700433.1|606715_607225_+|tail	phage major tail tube protein	tail	A0A088FRU2	Escherichia_phage	53.3	4.0e-48
WP_012337638.1|607227_607515_+|tail	phage tail assembly protein	tail	A0A193GYZ8	Enterobacter_phage	44.6	1.4e-13
WP_040123121.1|607641_609861_+|tail	phage tail tape measure protein	tail	V5YUN9	Pseudomonas_phage	47.1	4.6e-104
WP_040123122.1|609857_610340_+|tail	phage tail protein	tail	A0A193GYE0	Enterobacter_phage	47.6	8.9e-29
WP_040123123.1|610336_610555_+|tail	tail protein	tail	A0A1W6JT40	Escherichia_phage	48.6	2.0e-12
WP_040123124.1|610545_611628_+	phage late control D family protein	NA	A0A088FRU7	Escherichia_phage	45.9	1.7e-91
WP_004089237.1|611923_612265_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_004089235.1|612264_612873_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_027700013.1|612878_614876_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_027700012.1|614869_615829_-	ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_038229804.1|616297_617299_-	octaprenyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_004089231.1|617549_618044_+	single-stranded DNA-binding protein	NA	A0A0U1VYM4	Pseudomonas_phage	62.6	1.0e-32
WP_080679699.1|619691_620522_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_080679700.1|620822_622031_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_051606201.1|622191_622719_-	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_038229807.1|623253_623733_-	magnesium transporter	NA	NA	NA	NA	NA
WP_038229809.1|623828_624113_-	magnesium transporter	NA	NA	NA	NA	NA
WP_080679701.1|624295_626068_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_004089222.1|626083_626353_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_004083781.1|626345_626738_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_152534381.1|627109_627958_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	33.0	6.8e-08
WP_004083779.1|627978_628929_-	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_004083778.1|629194_629512_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_080703192.1|629545_630937_-	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_004083776.1|630978_631701_-	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	32.2	1.6e-26
WP_004083775.1|631700_632231_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_004083774.1|632208_632778_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_004083773.1|632774_633323_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_011097728.1|633340_634342_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	35.3	2.8e-37
WP_004089208.1|634403_634631_+	BolA family transcriptional regulator	NA	NA	NA	NA	NA
WP_038229815.1|634701_635979_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_011097729.1|635975_636278_+	EF-hand domain-containing protein	NA	NA	NA	NA	NA
WP_038229818.1|636287_636863_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038229820.1|637118_638003_+	acetyltransferase	NA	NA	NA	NA	NA
WP_027700000.1|638004_638370_+	DUF4224 domain-containing protein	NA	A0A2H4JF29	uncultured_Caudovirales_phage	56.1	2.6e-09
WP_152534380.1|638710_642715_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	56.2	1.8e-119
WP_038229822.1|642874_643663_-	DsbC family protein	NA	NA	NA	NA	NA
WP_038229824.1|643794_644769_-	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	29.7	8.6e-31
WP_038210991.1|645026_645920_-	ion transporter	NA	NA	NA	NA	NA
WP_038229826.1|645987_647223_+	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	24.1	6.6e-20
WP_038229828.1|647630_648995_-	glutamate--cysteine ligase	NA	NA	NA	NA	NA
WP_027699998.1|649214_649826_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_027699997.1|650456_650690_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040123125.1|650785_651757_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123126.1|652566_653214_+	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_004089159.1|653305_654088_+	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_004089155.1|654133_654874_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_038229834.1|654981_655596_-	high frequency lysogenization protein HflD	NA	NA	NA	NA	NA
WP_038229836.1|655592_656732_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_004083752.1|656728_657187_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_004083751.1|657366_657687_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	42.0	4.2e-11
WP_038229838.1|657819_660096_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	45.0	2.9e-170
WP_004083749.1|660444_660663_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_004089137.1|660779_661511_-|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
>prophage 3
NZ_CP006740	Xylella fastidiosa MUL0034, complete genome	2642186	984156	998859	2642186	integrase	Xanthomonas_phage(50.0%)	23	997810:997825	1005179:1005194
WP_040123149.1|984156_985332_+	replication initiation factor	NA	S0F3F7	Stenotrophomonas_phage	45.3	2.5e-77
WP_040123150.1|985372_985684_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038230226.1|985698_985899_+	hypothetical protein	NA	S0F2M5	Stenotrophomonas_phage	60.0	8.7e-15
WP_040123151.1|985895_986141_+	hypothetical protein	NA	A0A1D6ZIT7	Xanthomonas_phage	56.6	1.2e-05
WP_051606207.1|986239_987721_+	hypothetical protein	NA	A0A1W6DXV5	Xanthomonas_phage	47.6	7.9e-44
WP_080679719.1|987726_988098_+	DUF2523 domain-containing protein	NA	A0A1D6ZIU0	Xanthomonas_phage	45.9	8.9e-21
WP_040123152.1|988102_989257_+	filamentous phage Cf1c related protein	NA	S0F3F8	Stenotrophomonas_phage	57.6	6.2e-113
WP_038230212.1|989486_989798_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038230214.1|989857_990208_-	hypothetical protein	NA	Q38057	Xanthomonas_phage	51.0	4.1e-07
WP_040123153.1|990251_990650_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_040123154.1|990797_991082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080679727.1|991074_991341_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020852991.1|991344_991527_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040123155.1|991643_992819_+	replication initiation factor	NA	S0F3F7	Stenotrophomonas_phage	46.2	1.5e-77
WP_040123156.1|992859_993171_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038230226.1|993185_993386_+	hypothetical protein	NA	S0F2M5	Stenotrophomonas_phage	60.0	8.7e-15
WP_040123151.1|993382_993628_+	hypothetical protein	NA	A0A1D6ZIT7	Xanthomonas_phage	56.6	1.2e-05
WP_051606208.1|993726_995208_+	hypothetical protein	NA	A0A1W6DXV5	Xanthomonas_phage	47.6	4.6e-44
WP_080679719.1|995213_995585_+	DUF2523 domain-containing protein	NA	A0A1D6ZIU0	Xanthomonas_phage	45.9	8.9e-21
WP_038230210.1|995589_996744_+	filamentous phage Cf1c related protein	NA	S0F3F8	Stenotrophomonas_phage	58.1	2.5e-114
WP_040123157.1|997092_997509_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038210426.1|997534_997762_-	hypothetical protein	NA	NA	NA	NA	NA
997810:997825	attL	GGGGCTAGCCCCCTAC	NA	NA	NA	NA
WP_080703198.1|998028_998859_+|integrase	site-specific integrase	integrase	Q7Y5X7	Haemophilus_phage	46.2	3.6e-62
WP_080703198.1|998028_998859_+|integrase	site-specific integrase	integrase	Q7Y5X7	Haemophilus_phage	46.2	3.6e-62
1005179:1005194	attR	GTAGGGGGCTAGCCCC	NA	NA	NA	NA
>prophage 4
NZ_CP006740	Xylella fastidiosa MUL0034, complete genome	2642186	1003607	1014530	2642186		Xanthomonas_phage(50.0%)	15	NA	NA
WP_040123160.1|1003607_1004687_+	DUF2075 domain-containing protein	NA	Q6UAZ2	Ralstonia_phage	29.0	8.6e-24
WP_004087004.1|1004865_1005135_-	hypothetical protein	NA	NA	NA	NA	NA
WP_051606241.1|1005194_1005539_-	hypothetical protein	NA	Q38057	Xanthomonas_phage	51.0	3.1e-07
WP_040123161.1|1005733_1006084_+	hypothetical protein	NA	Q38057	Xanthomonas_phage	51.0	4.1e-07
WP_012382578.1|1006156_1006396_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038230210.1|1006628_1007783_-	filamentous phage Cf1c related protein	NA	S0F3F8	Stenotrophomonas_phage	58.1	2.5e-114
WP_080679719.1|1007787_1008159_-	DUF2523 domain-containing protein	NA	A0A1D6ZIU0	Xanthomonas_phage	45.9	8.9e-21
WP_051606209.1|1008164_1009646_-	hypothetical protein	NA	A0A1W6DXV5	Xanthomonas_phage	47.6	4.6e-44
WP_040123151.1|1009744_1009990_-	hypothetical protein	NA	A0A1D6ZIT7	Xanthomonas_phage	56.6	1.2e-05
WP_038230226.1|1009986_1010187_-	hypothetical protein	NA	S0F2M5	Stenotrophomonas_phage	60.0	8.7e-15
WP_040123156.1|1010201_1010513_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123155.1|1010553_1011729_-	replication initiation factor	NA	S0F3F7	Stenotrophomonas_phage	46.2	1.5e-77
WP_020852991.1|1012471_1012654_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080703199.1|1012657_1012924_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004085576.1|1013837_1014530_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2I2L6M4	Escherichia_phage	38.5	6.5e-25
>prophage 5
NZ_CP006740	Xylella fastidiosa MUL0034, complete genome	2642186	1037809	1073931	2642186	integrase,portal,head	Xylella_phage(94.44%)	43	1064352:1064367	1075778:1075793
WP_038230190.1|1037809_1038142_-	DNA-binding transcriptional regulator	NA	A0A0P0IRJ4	Acinetobacter_phage	39.8	2.4e-17
WP_040123165.1|1038330_1039833_-	hypothetical protein	NA	C8CLJ8	Xylella_phage	94.0	6.2e-246
WP_038230599.1|1039829_1040612_-	hypothetical protein	NA	C8CLJ7	Xylella_phage	89.6	1.0e-127
WP_020850879.1|1040698_1040944_+	hypothetical protein	NA	C8CLJ6	Xylella_phage	90.1	2.7e-34
WP_080703200.1|1040909_1041344_+	DUF2335 domain-containing protein	NA	C8CLJ5	Xylella_phage	64.9	3.2e-30
WP_128283847.1|1041452_1041656_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020850878.1|1041652_1043422_-	hypothetical protein	NA	C8CLJ3	Xylella_phage	89.7	3.6e-277
WP_040123166.1|1043425_1044634_-	hypothetical protein	NA	C8CLJ2	Xylella_phage	98.8	2.2e-217
WP_038230533.1|1044637_1045345_-	hypothetical protein	NA	C8CLJ1	Xylella_phage	79.6	6.8e-94
WP_040123167.1|1045375_1045621_-	hypothetical protein	NA	C8CLJ0	Xylella_phage	100.0	8.4e-36
WP_016024102.1|1045590_1047519_-|head	head completion protein	head	C8CLI9	Xylella_phage	100.0	0.0e+00
WP_016024101.1|1047515_1047923_-	DNA stabilization protein	NA	C8CLI8	Xylella_phage	100.0	1.9e-69
WP_040123168.1|1047943_1049170_-	hypothetical protein	NA	C8CLI7	Xylella_phage	99.8	1.9e-229
WP_016024099.1|1049217_1050072_-	hypothetical protein	NA	C8CLI6	Xylella_phage	100.0	2.7e-129
WP_016024098.1|1050073_1052146_-|portal	portal protein	portal	C8CLI5	Xylella_phage	100.0	0.0e+00
WP_080679723.1|1052148_1053564_-	DNA packaging protein	NA	C8CLI4	Xylella_phage	100.0	3.5e-283
WP_040123169.1|1053472_1053799_-	hypothetical protein	NA	C8CLI3	Xylella_phage	99.1	2.0e-53
WP_016024095.1|1053798_1054113_-	hypothetical protein	NA	C8CLI2	Xylella_phage	100.0	7.5e-53
WP_038230362.1|1054109_1054655_-	hypothetical protein	NA	C8CLI0	Xylella_phage	99.4	7.8e-82
WP_051606210.1|1054651_1055143_-	lysozyme	NA	C8CLH9	Xylella_phage	98.8	3.4e-92
WP_040123171.1|1055479_1056187_-	hypothetical protein	NA	C8CLH7	Xylella_phage	97.4	2.6e-125
WP_040123172.1|1056461_1058990_-	DNA primase	NA	C8CLH6	Xylella_phage	77.2	0.0e+00
WP_040123173.1|1059125_1059716_-	phage antirepressor protein	NA	C8CLH5	Xylella_phage	92.7	6.3e-53
WP_020852637.1|1059974_1060358_-	hypothetical protein	NA	C8CLH2	Xylella_phage	99.2	1.9e-66
WP_040123174.1|1060445_1060775_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123359.1|1060764_1060989_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123175.1|1061054_1061720_+	helix-turn-helix transcriptional regulator	NA	E7C9R0	Salmonella_phage	33.0	2.5e-21
WP_040123176.1|1061902_1062436_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040123177.1|1062432_1062948_+	hypothetical protein	NA	NA	NA	NA	NA
WP_051606211.1|1062944_1063358_+	hypothetical protein	NA	C8CLG9	Xylella_phage	63.9	1.1e-35
WP_004088545.1|1063354_1063816_+	DUF1566 domain-containing protein	NA	NA	NA	NA	NA
WP_004088547.1|1063815_1064217_+	hypothetical protein	NA	C8CLG7	Xylella_phage	66.2	3.6e-44
WP_020852641.1|1064213_1064408_+	hypothetical protein	NA	C8CLG6	Xylella_phage	82.8	7.2e-22
1064352:1064367	attL	CGCCGCGCGCACTACG	NA	NA	NA	NA
WP_016024078.1|1064439_1064634_+	hypothetical protein	NA	C8CLG5	Xylella_phage	100.0	3.3e-27
WP_040123178.1|1064633_1065122_+	hypothetical protein	NA	C8CLG4	Xylella_phage	96.9	4.7e-62
WP_040123179.1|1065118_1066399_+	DUF2800 domain-containing protein	NA	C8CLG3	Xylella_phage	99.5	1.4e-246
WP_016024075.1|1066395_1066962_+	DUF2815 family protein	NA	C8CLG2	Xylella_phage	100.0	5.2e-105
WP_155266613.1|1067087_1068245_+	hypothetical protein	NA	C8CLG1	Xylella_phage	95.3	1.1e-207
WP_040123180.1|1068246_1070427_+	DNA polymerase	NA	C8CLG0	Xylella_phage	96.4	0.0e+00
WP_038230497.1|1070423_1070702_+	VRR-NUC domain-containing protein	NA	C8CLF9	Xylella_phage	95.6	7.3e-44
WP_040123181.1|1070703_1071009_-	DUF1640 domain-containing protein	NA	NA	NA	NA	NA
WP_016024069.1|1072664_1072922_+	DUF4224 domain-containing protein	NA	C8CLF5	Xylella_phage	100.0	9.8e-43
WP_040123182.1|1072911_1073931_+|integrase	tyrosine-type recombinase/integrase	integrase	C8CLF4	Xylella_phage	88.8	7.1e-169
1075778:1075793	attR	CGCCGCGCGCACTACG	NA	NA	NA	NA
>prophage 6
NZ_CP006740	Xylella fastidiosa MUL0034, complete genome	2642186	1116226	1125585	2642186	plate,tail	Aggregatibacter_phage(25.0%)	13	NA	NA
WP_038229562.1|1116226_1117102_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.8	1.4e-08
WP_038229560.1|1117098_1118076_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_020852919.1|1118334_1118781_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040123183.1|1118960_1120133_-|tail	tail fiber protein	tail	A4PE46	Ralstonia_virus	32.7	8.5e-09
WP_038230308.1|1120136_1120697_-	DUF2612 domain-containing protein	NA	A0A0M5M1K4	Salmonella_phage	26.1	1.4e-06
WP_040123184.1|1120693_1121839_-|plate	baseplate J/gp47 family protein	plate	D0UIH5	Aggregatibacter_phage	49.2	4.8e-97
WP_004089386.1|1121988_1122297_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_011097871.1|1122305_1122545_-	antitoxin	NA	NA	NA	NA	NA
WP_040123185.1|1122682_1123036_-	hypothetical protein	NA	Q7Y5S5	Haemophilus_phage	50.4	1.3e-24
WP_040123186.1|1123032_1123674_-	hypothetical protein	NA	A0A2H4J8H6	uncultured_Caudovirales_phage	36.8	2.2e-30
WP_040123187.1|1123670_1124501_-	hypothetical protein	NA	D0UIH8	Aggregatibacter_phage	51.1	7.5e-76
WP_012382585.1|1124497_1124815_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123188.1|1124814_1125585_-	hypothetical protein	NA	Q7Y5T0	Haemophilus_phage	36.7	1.2e-30
>prophage 7
NZ_CP006740	Xylella fastidiosa MUL0034, complete genome	2642186	1128809	1139978	2642186	integrase	Xylella_phage(62.5%)	9	1127201:1127214	1149935:1149948
1127201:1127214	attL	TGCCATCACGGCCT	NA	NA	NA	NA
WP_004087249.1|1128809_1129247_-	DUF3277 family protein	NA	Q7Y5T4	Haemophilus_phage	63.1	3.6e-45
WP_051606212.1|1131305_1131923_+	hypothetical protein	NA	C8CLG0	Xylella_phage	96.1	1.8e-114
WP_004085028.1|1131919_1132198_+	VRR-NUC domain-containing protein	NA	C8CLF9	Xylella_phage	96.7	1.9e-44
WP_011097621.1|1132199_1132508_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123189.1|1132592_1134011_+	DEAD/DEAH box helicase	NA	C8CLF7	Xylella_phage	98.5	4.6e-275
WP_016024069.1|1134164_1134422_+	DUF4224 domain-containing protein	NA	C8CLF5	Xylella_phage	100.0	9.8e-43
WP_040123190.1|1134411_1135431_+|integrase	tyrosine-type recombinase/integrase	integrase	C8CLF4	Xylella_phage	88.5	2.1e-168
WP_038230066.1|1135497_1137435_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.3	1.2e-68
WP_038230106.1|1137596_1139978_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	28.7	2.4e-10
1149935:1149948	attR	TGCCATCACGGCCT	NA	NA	NA	NA
>prophage 8
NZ_CP006740	Xylella fastidiosa MUL0034, complete genome	2642186	1307082	1313440	2642186		Xylella_phage(33.33%)	11	NA	NA
WP_004089519.1|1307082_1307382_+	HigA family addiction module antidote protein	NA	M9MUN2	Rhodococcus_phage	45.9	1.1e-13
WP_004085025.1|1307561_1307897_-	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
WP_038228269.1|1307893_1308148_-	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA	NA
WP_040123196.1|1308200_1308899_-	hypothetical protein	NA	C8CLH7	Xylella_phage	80.4	9.0e-99
WP_038228391.1|1309027_1309438_-	hypothetical protein	NA	A0A088F6Y8	Sulfitobacter_phage	43.0	2.4e-11
WP_040123197.1|1309485_1310175_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123198.1|1310155_1311058_-	YdaU family protein	NA	A0A142K7R2	Mycobacterium_phage	59.0	1.0e-17
WP_080679645.1|1311054_1311354_-	hypothetical protein	NA	C8CLG1	Xylella_phage	81.8	4.3e-42
WP_040123200.1|1311455_1311830_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040123201.1|1311835_1312441_+	conjugal transfer protein TrbN	NA	NA	NA	NA	NA
WP_038228248.1|1312993_1313440_+	hypothetical protein	NA	B3GAJ9	uncultured_virus	43.7	3.7e-21
>prophage 9
NZ_CP006740	Xylella fastidiosa MUL0034, complete genome	2642186	1577241	1623333	2642186	integrase,tRNA,portal,terminase	Stenotrophomonas_phage(16.67%)	54	1582928:1582987	1620477:1630045
WP_021358189.1|1577241_1579314_+|tRNA	methionine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_051606219.1|1579612_1580032_+	Rnf electron transport complex subunit RnfB	NA	NA	NA	NA	NA
WP_038228014.1|1580149_1580350_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038228009.1|1580838_1581507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038228007.1|1581608_1581866_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080679634.1|1582452_1582887_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123221.1|1582859_1583375_-|portal	phage portal protein	portal	K7PHM5	Enterobacterial_phage	34.7	9.5e-13
1582928:1582987	attL	GGCGCTGGACGCTGGACCAGTCGTGCATCCAGGTGACTTCGGGACGTTTGGACCAGGCTT	NA	NA	NA	NA
WP_038228002.1|1583371_1583608_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123222.1|1583684_1585784_-|terminase	phage terminase large subunit family protein	terminase	A0A1B2LRQ2	Wolbachia_phage	30.2	8.0e-74
WP_038228344.1|1585780_1586389_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123223.1|1586785_1588252_-	virulence factor	NA	A0A2D1GN57	Marinobacter_phage	33.1	2.3e-59
WP_040123224.1|1588248_1589304_-	DNA primase	NA	G9CU58	Helicobacter_phage	44.3	1.4e-13
WP_038227995.1|1589302_1589704_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040123370.1|1589805_1590429_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038227991.1|1590484_1590709_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038227987.1|1591075_1591309_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080679633.1|1591301_1591772_+	DUF5131 family protein	NA	NA	NA	NA	NA
WP_051606220.1|1591755_1592253_+	single-stranded DNA-binding protein	NA	L7TJL2	Pseudomonas_virus	52.3	1.0e-32
WP_040123372.1|1592224_1592497_+	hypothetical protein	NA	V9IQX6	Stenotrophomonas_phage	51.7	1.3e-08
WP_040123225.1|1592496_1593669_+|integrase	integrase	integrase	V9IQN0	Stenotrophomonas_phage	53.5	3.8e-118
WP_038227961.1|1593978_1594182_+	DUF4102 domain-containing protein	NA	NA	NA	NA	NA
WP_080679632.1|1594484_1595279_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_011098180.1|1596586_1597249_-	hypothetical protein	NA	NA	NA	NA	NA
WP_140189681.1|1597330_1597558_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057683625.1|1597938_1598193_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5NR91	Burkholderia_phage	54.8	1.8e-17
WP_012337734.1|1598173_1598518_+	helix-turn-helix transcriptional regulator	NA	A0A1S5NNJ5	Burkholderia_phage	49.1	1.1e-17
WP_004083921.1|1598795_1599083_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004084245.1|1599042_1599360_+	BrnA antitoxin family protein	NA	NA	NA	NA	NA
WP_040123226.1|1599765_1600008_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040123227.1|1600020_1600272_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040123373.1|1600366_1600663_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027700038.1|1600716_1601115_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040123228.1|1601370_1602162_-	DNA adenine methylase	NA	B7SYF3	Stenotrophomonas_phage	69.6	1.2e-104
WP_155266601.1|1602228_1602435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040123229.1|1602397_1603093_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004083636.1|1603168_1603588_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123230.1|1604095_1606921_-	VWA domain-containing protein	NA	A0A0A1IVS6	Pseudomonas_phage	29.5	4.4e-59
WP_004083943.1|1606910_1607147_-	hypothetical protein	NA	A0A0A1IV01	Pseudomonas_phage	53.0	6.3e-12
WP_004083945.1|1607143_1607572_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123231.1|1607562_1609005_-	DUF2163 domain-containing protein	NA	NA	NA	NA	NA
WP_040123232.1|1608994_1610182_-	hypothetical protein	NA	J9STL4	Pseudomonas_phage	32.4	1.0e-41
WP_040123233.1|1610174_1612688_-	hypothetical protein	NA	A0A0U2BXT9	Paracoccus_phage	30.4	5.0e-22
WP_040123234.1|1612852_1613299_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123235.1|1613295_1614045_-	hypothetical protein	NA	A0A2I7QRV3	Vibrio_phage	30.0	6.6e-23
WP_040123236.1|1614041_1614515_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004086810.1|1614511_1614832_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123237.1|1614828_1615614_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155266602.1|1615610_1615754_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123238.1|1615753_1616335_-	lysozyme	NA	C8CLH9	Xylella_phage	82.7	1.9e-62
WP_040123239.1|1616327_1616552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123240.1|1616624_1616984_-	DUF2190 family protein	NA	NA	NA	NA	NA
WP_040123241.1|1619361_1620924_-|portal	phage portal protein	portal	K7PHM5	Enterobacterial_phage	39.0	1.3e-89
WP_038228002.1|1620920_1621157_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123222.1|1621233_1623333_-|terminase	phage terminase large subunit family protein	terminase	A0A1B2LRQ2	Wolbachia_phage	30.2	8.0e-74
1620477:1630045	attR	GGCGCTGGACGCTGGACCAGTCGTGCATCCAGGTGACTTCGGGACGTTTGGACCAGGCTTGGTAGAGGGGGAGGATGGCATCCACCAGTGATTCAACCAGGTTGCCGTCGACGTCGCGGGGGGTGGGGACGATGTTGATGCCGCTGGGGCCGATGATGTTCTGGACTAAGGTGGATAGGCCGCCGCTGATGATGTCGTGGTTGCGGTCCAGGTGGCGTGCTTGGTTGCGCAGGGCCACGCCGGTCATGGTCACGATGGTGTTGCCGCTGCCAAAGTCGCGGGAGGCTTGGCGCAGGTGGGTTTTTTCCGCCGCTTCATAGGCCTGTCGGTAGGCAACGGCTTTGACGCGGCTCTGGGCACGGGAGGCAGCCCAGGCTGGGGCAAGCTGGAGGAGGCTGCGGTCGAAGGCGGCAACGAGGCGATGCAGGCGCGGGGATGCGGTGGTCATGGTGCGTCTCCGCCGCTGTCTCTGCGGAAGTCGGCAATGGCAATGCGAACGGTGCCGCTTGTGGAGGGGGCCGCTTCTGCGGCGGCGCGGCGCAGCCATTTGTCCAGTTCATCGCTAATCCATTTGGCATCGGCGCGGGTCACTTGGCGTTCGCCATACCGGACGGATTGGCCCAGCAGGACTTTGCGGTAGGCGTCTTTTAGAAGTGCAACTTGGTCGGTAGCAAGGCTCATGTGTGTCTCTGGTGTTGGTTGGGAAGCCACTCGGTAAGCCTGGTGATGGGGGCTTTGGTGCGGTGCGTCGTGCGGTTCATAGACGCTTGTTCCAACGGTCGGAGCCAAAGCCGCTGTTAGGAAGCGGTGGCATGTCATGGGGGGCGCTGGGCGGGGCGGGGGTGGCGGTCACTGAGCGCAGGGTGCCGCGGGCGGTGTCAGTGGGCGGGGCAGCTGGTGGGTCAAAGAGGCTGCCGTTGGTCGGTTGGTAGATGGCTTCCAGGGCTTCCCATTGTGATTCGCGCATGACGTCGACTTTGAGTGCGGGGGCCAGGGTGGCCCAGAGGGCGTAGACGGCGGTGTCCAGGGGTTCGTTGCGCACGCCGCGGGGTTTGATCCAGCGTCCGGCGTCTTTGTCGAAGTATTCGGCGGTGAGGCCGGCGAAGTAGTGTTCTGGCAGTGCGCCAGGATCAGGGTGCAAGGGGTCATGGTTGTCGTCGCCACGTCCGCCAGGAAAGCGCAGCATGCGGGCGCTGATGTCTTCGGCGGTGCCTGTTTGGGCGGCGTTGTCTTTGGCAGCCAGGGCGGCGCCTAGCCAGCCGTAGATCATGTGTTTGAGGACGCTGGTGCCAACGCCCCAGACGCCGACGTCTCGGGCCAGTGTTTTGCCGCGTTCGTCAACGGTGGTTTTTGAGGGGCGGTAGACGGCGCGGTCTGATTTGATTTCGGCGCGGCCACGCACGAGGTAGAGGGTCTGTTTCAGAAAGCCATGAGGGGTCTCTAGGATGCGGGATTGGCCGGACCAGCCAACGTGTTGTTTGATGAATTGGGCGACGGTTTCGGTCCAGTTGCCGCCGTCAATGGCGACGGCGCTAATGGGCATGTCGATGCCACAGGCGGTTTTCCAGGTGCCGCGAAGGTAGGTGTCCAGGTCGGTGTAGCTGTCCAGGACGGTGGGGTCCAGGTCGATGACGGCGTAGTCAACGATGTAGCGGCGTTGGCCACGGCCGGTGGCGATGAGGTGGATTTCAGCGCGGTCATGGGCAAGGTCCACGCCCGCCGCAAGGACGAGGCCGCCCAGGGGCACCAGGCCACGATAGACGCCAGGTTCGGCGAGGGTGGCCACTTCGTGAGCGGCGCGGACGTCGCGTTCGCCTTGGAAGGGCAGGCCCAGAATCAGGTTGGTGAAGCCAGGCAGTTTGGAGGGGTCGCGTTTGGCTTCGGCCCATTTGTCTGCAATCTGTTTCCAGCTCAGGCCCAGGCCCAGGGGGGCGTAGGCGGCCCAAAGGTGGTAGCTGCGATGGTCCGGAGGGGCCGATGGGTTGTGGGGGTGCCAAAAGGCGGTGCCGCCGGTGCCGCGTTCTTTGAGGATGGTGTTTTTGTGGTGTTCTTGGATGATGCAGCCGTTGACGGCGCAGGCAAAGGTGCCATCTGGCTGGAGGTGTTCCAGGTCTAGGACCTGTTCGCCGCCGCAATGGGGGCAGTGGATGTGGTAGTGGCGTTGGTCGCCGTCAAGGAAGTTTGTTTCAATCGCGCTGCCACCAGCAACGGTGGGGGTGCAGGCGCGGTAGATTTTGCCGCGTTCGCCGTGGGACATGATGCGGGCGGCGATCTGTTGGTCGGCGGTGCCTTGGTTGTTGAGGTTGCGGGGGTATTCGTCAATTTCATCCAAAAATGCGTAGCAGGCGGTGATCTGGCGGAGTTGGCTGGAGGAGTTAGCCCATTTCACGAAGAGGGTGCCGCCTGGATATTGTTTTTCGAAGGTGTTGTTGGTGGTGAGTTTGTTGAGCAGGGGGGGCATGTCCAGGACGCCTGGGTCAAATTTGGCTACGGTCCAGGTGCGGGCGAGGTCTTTGACGGGTTGGGTGACGATCATGGAATCAATGCCGCGGTCAATGACGTAGCACACCCAGTTGATGCCGATTTCGGTCGCGCCAATTTGGCCGGATTTCATGAAGCTGACCTGTTGCACGGGGGTGTGATCGCTGAGGCAATTCATGATTTCGCGCAGCGGGGGGTGACGGTCGGTGCGCCATTGGCCTGGTTCAGCGCCTGAGCCGCGGGCGATCTTGCGGTAGGCATCGGCCCATTGGCTGATCTCCAGGCGCGGGGGGACTTCCCAGGCGTGCTGCCAGGCGGTGGAAACGGTGTGGTAAGCGTTGGCCAGTTGGATGTCGGGGAAGTCGTCGAGGCTCATCCGGATACTCCTTCTTCCTCGAATTCGAGGGTGTCGTTGGTGTCGTTGGCTTGGACGGGTTCGGCGTCGGGTGTGTTGGTTTTCAGCAAGGTCGTGGCGGCGTCCTGCATTTGCTTGCAGATGTGGGCGACGTCGGTATCAATGATCTGGGTGACTTTGCCCGCATCGGTCTCTGCCGCCAGTGTCTTGCGTAGTCGGCCACTCATGCCGCGGAGCTGGTTCAGTGCTTGGCGTACCAGGGTGAAGACGGCGCGGTTGACCTCATCTACGCAGGTCAGTTGTTCGGCTTGCTTGCCCAGATCAAGTTCAGCCATGAGTGCACGCGCGACGCGCTCGCGGCGGACCGCTTCTTGCACCGGAATGCCCTGTGGGGTCATCACGGTGAAGGTGGGTACGCCTGAGACGGGAGAGTCGGTCATGCCGCGCTTGCCGCCCTGCACGGGATGGGTCATGCCATCCAGCAGGGTGTCACTGGCGTTCACGTGGATGCGGCCATCCTCGCCCAGGATCACATTGCCTTTGCGCCGCATCCGGCGGATGTAGGAGTCGCTGACGCCGCGGTGCTTGGCGTATTCGGCGGTGGTCATGGTCGTCACAGAACCCATCGGAACCACCCCGCCCCCACCGGAACCAAAATCTGGAACCAGGACATGCACGCAAAACGGGGTCCGAATTGCCCGCGGGGCAGACCCCCACGGAGGAACCTTTGACAGCGGCCCGCCACGGGGAGCAGCCACAGAAATCCCGACCCACGGCTCTGCTGTCCAGACCGTCCAAACGTGGGTGAAAAGGTCTGGACAGCAAAACCCGCGCCGTGATTAGTTTGTCCAGACCGTCCAAACCGTCCAGACCTAGATGGATATATAGAAGGATGGATGAAACGCGCTCCCCTATACGTGCGCACGTCAAAAAGGTCTGGACGGTCTGGACAGGCCCGCCGTTGCTCGCTCCAGGTCTGGACAGAGGTTTGGACGGTCTGGACAGGTGTGGACAATGGCGGCTCAGAAATCGGGCGCATCATCCCTCCCGTTGTCATCCAGTGGCTTAGACACAGGCGTTAGCTCGTTAATGCAAGTGCCTTCGCGCACCCAACGTTGTTCTCGTGTTTTTGTGTCCGGCCAGCGTTTCCGCAGGTGATCCCACGTATCCTCGACACAGGCGTCCCCCTGCACAGGGTCACGCCCTAAGCGCTTCATGATGTTGGCAACGCGCATCTGGGCACTCCTGTCGTGCCTGGCTGGGTCCATGCCGATGGCAAACTCCAGTAGCTCATCGGTGGTCGTCCACAGGACACGCCCTGCAGTGAGCTTCAACCGCTGCGGTGCAATCTCCTTCCCATCCACGGTTTTTCGAAATTGACCGGCGAGGAATTGCTCCACGCGGGCCTCCCAGCTATCGCCGATGTAGCGGGCGGCCTGCTCAGCGGGTGCGTCATCAGGCAATACCCAGTACGGGAAGCGATCAAGGAACAGCTGCACTGCCTCGGCCCATAGCTGATCGCGCTCGGCCACAATGCGCGAGACATCCACGTTGCCATCGGCACGCACCGGCAGAAAGCGCCGCCCGCCCGTGGCATCCTTCAGGTATTCCCGATCATTGGTCGTGCCGACAAACACGCACTCCCGCCGGTAACTATTCGGCAGACGTTCGTAAGGCGCGCGAAACTTATCGGTACGTCGGGTAATGGCCACTTTCACCGCGGTCACATCCGCCTTGCCGAAGCTGTCCATCTCGCCGATCTCCACGCCCCAGCACCCCTGGATGACCTGATAAAAGTCCTTCCCCGTGGGCGACTCAGCCGTTTCTACAAACCAGTAGGTGCCGAACAGTTCGCTCAGTGAGGTGGACTTGTGCTTGCCTTGCGGGCCTTCCAGCACCAGCATGAAATCCACCTTGGCCCCAATGGATGGATTCTTTGGATCCACCCACAGCACCCGCGCCACGGCACCGACCATGAAACACAACGAAGCTTGCCGCGAATAAGTGCGGTCACTGGCACCGAACATGTCGATGAGCATCGTCTCCACGCGCGGCGTCCCGTCCCACTGCACCCCCGTCAGGTATTCACGGATCGGGTGCCGCCGATACCGCCGTGCAACCGCAATCACGGCCTTTAGCACGCTGTCATCGCTGCACTTCATTCCATAGCGCTCTGGATGCTGGAGCCATGCCGCAAGCTCGCTACTGTCAGCATCCACAAACTCATCGCGTGTACTGCCCTGCCACGGTGCCGGACGGGCCATCACCACCTGGTTACTGGAATCGTTCAACCAGAACAACGCTTTCAACCGCTCATCGTTCTCAATGATGGTGATGAGGTTATGCATCGTGCCCTCGACATGACCGTCACGGGTGCGCGTTAACTGCTGCTTCCAGTCATCGGACCCTGGCACACCGCCATGACCACCGCCGCCGCCATGAGAACGGCCCTTGCCGCCATCCAGGATGGTGATCACCGGCCTCGTCATCGCCCCCCTCCCCGCACCACATTGACGTCAACACGCCGCGCCGCCGCCCAGGCGGCTGCCTGCGGGGGTGTCCAGCCATCCTTTTCGAAGGCATCGGCAAGATCCCAGCCTTTGCTGCACCCGTGCGTGTCAATCATGCCAATGCTGCGCACCCCAACGCGCGACACGTAGTGCGCCACACCCGCCCTGAAATCACCGGCATCCGTGCGGTTGCCCAGCATGGCCTTGCGGCCCACCTCATCGGCATCCGGCCACAGCACCACATCGCGCCCAGCCAGCGGCGTCCAGTCCACCTTACGGATCCCGTTCGTGCCACCAGGCCAAGCAACCACCGCATACTGCGGCCACGCGCGAGCGCCGGCTGCGCAACACTTTTCACCTTCAACAATCAACACCGGCGCGTCTGGCTTGACCGCCAACGTATCCAAACCAAACAAGGGCCGCGGTTCTGGAAAATGCTGCAAACACCACTGCCGCGCTCCGGTCGGACTCACGCACCAGGTGAGCGTCGGCGTCCACTTTTTTAGCGCCCCCGTGTCCCGATCCTTGATCTGCGCCCGCGCCACGTAGCCGAGCAAACGCCCCTGCGCATCACGGTAGGCATCCAGGCGCTGCACCTTCAGAGGAGCGGCCCTACCCCGCTTGGGATTCCATATCGGCACCGTCCAGTGCGCATCACCCATCACCTCCGGCGCATCTTCCGGTACTGGCAGCAGCGGCACCCAGACCATGTCAGGCACATACTCTGGCCGCTGCCGCTGCGCCTGTTGCTCGGCCTGCGGCAAGGCACCGCGATCAAGCTGACGCACCGCCTCACGGAAATCCACGTTGAGGTAACGCATCACAAAGCCAATCGCATCATGATGCGCGCCACACCCAAAGCAATGCACAAACCCTTTATGCGGAATCACCGTGAACGAGGGGGTGTGCTCGTGATGGAACGGACATACCCCCGTGTACTCAGCGCCTGTACGCCGCAGCGTCACATAGCGGCCCACCACCTCGACCAGATCAATCCGCGCGCGTAATGCCTGCGTATCCACCCTAGTCATGCTGCTGCCCCGCCTGACGCCGCTGCGCCTGCTCACGGTTGACCTGCATTCCCCATTGCACCCGAAAGTACGCGGCGACGTATTCCCTGCATCCTGGCTGGGCCGTACAGCTGGTGCACGGGCACACCTGCGGCAGCGTTTGGATGTACGCCTTCCATTGCGTCCTGGGCTGATCCCGCAGCGCCTCGACAGCCTGACCCAAACACCGCGACACACTCATGGGCCACCCCGCAACAGCAACACCCCTTGCCTGCACCGTGATGCTTCGGCTTCTACCCGCATCCGTTCACGCGCGGCCAATGCCGCCGCACCACTCACCCCCTGTTCGCTGGAATACAAGGCCTCCAGCGCCGCTCGTAATCCGGCGCACTGCCGCGGCGTCATCGTGACCCTGCCTTGACGGCGGTATCCACTCGGTAAACGGTGACGGGCCATCATGCGGCCTCCCCACCAGCAACGGTGGTGCGTTGCTTACCGTGATGACCTGCGGCACAACACGCCTTACGCATCCGTGTTCTCCTGCTGAAACATCGCTTGTACTTGGCCGCGAACCCCCAACACCGCCGCGATCACATCGTCGGATTCATCAAGGATGCGCCGCACAAACGGCAGGTCATTTTTATCAATACGGCTATCAGCTAAGGCCGGTGCAATCACTTCCAACAACTGCGCAAATTCACTCACCAGCTCAGCCACACCAACGACTCCCGCCGCAGAATCAGCAGAGGGCAGACGCACCGGCAACACCCCACGACGCCGCGCCAAGTCGCGCTCACATTCGCCACGATACGGCTCAGGCAGCGCCAACACCCAGGCATCCACCAGATCCGCAGGAAGTGTCTTAACCGTGCCATCCATGTAACGCCGCAGCACCTGCGCGTTATTGCGCATGTCTTCGGCAACATCATCGCCAATGCGCAACGCAACGCCGCGCACGTCAGGGGCGGTGAGTGAGAGATACGTCTCGGCTAACACCATCGCAAACGACTGCGCATTCATTGCGGTTTGGTCCAACATGCGCCGCGTATATCCATAGATCACGCTTTGCAGCGGCGGCAGAAAACGAGGCTCACGCTTCATGCGCGCCTCCAATAACAGGTGCACCCTGTCCGTCATGCCGAACATCACGCCCTGCGCTAGCAGGCTCCCCCACACAATCACTTCAGTATTGGAGACACACATGACCAGAGAAAGCGGCTTAAACGACGTCCACATCGACCACATCTTCGCTATTGAACTTGCACTCGAAGGCTTGCTGCCTCTGCTGATTGATGCATCACCGAAACGCAACGAAGCCATTGCACTGTTGCAAACATGGGCAGAGCTAGAAACCTCAAAATACGAGGAAATACAGCTTGGTGAACTGGCAAACACGGTACTCAAACGAGTGCACTCAATGCGCTGATTTCGCGGCGCAATTCCAGGCACGTGCACGCGCCGACGTCGATCACCCCACACGTACAGGTGTATGCATATAACCCACCCGGCGCGCGCCGACGTAACGGCGTGATGCCTTGCTTCTTTAGATCAACGAAGAAGGAGATATGTTCTGCCTTTTCAAGCTGCCCACTATGAAATTGAGCCTGCAATGTAGACAGGTCTTTGGTGAAGCCGCGTTCTTGAGGACTGGGCGCGGTCAACCAATCACGCACCGCAAGACGGGTGAGTGGTTACCCAACACGTGGGTACGGGTCATCCAATTTGAACGCATCGAATTACGCACTCATGTTTGCCTCAATACAGCTAAAAATGATTCCGTCATGGAGGTCGCGTGATGTCGCTGCTATGGAAAATCACCGCGCGTAATTGGATGGACTGGCCCACTGAACGCCAACACCGCGTGACCGGAAAACGCCAGCACATTGAGTACAGCCGCACCTGGACGTGGGCCGACGGCCCCAAGCCGCAGGCAGAAATATCCATGACAACGACTGAGTCTCTACCGCACCACACCCAAGCACGTCACTTTAATGACGTTCTAGAAAAAGTAAAAAGCAATGACTAATCAATCTTTAATTAAACGGAATCACTTCATCTTCAATCCGTGGATTGGCCCTACAAAAACCGGCAAACCATGCAGGCGGACCAGCAAAAGAATTTGGAAACGCCCATTAAGGTGGGATCGTATTACCAGCATCCAATTAAGCATATGGGAAAAGATCAAGAGTCAATACCCCGGGCTTACAGATGAAAATATGCAAACAACGCATGGATTTATCAAACCATGCCGACAACCTGTGTTATGCGGCTCACACAGTGACGTGTTCGATAAGGATGTACCGCAGCAATGGCGCGATGCGCTGTTCTCATTAATCCATGCAACGCCAAACATTCATTGGCTATTGCTAACGAAAAGTAGCGGTAACGCCCACATCACTGATGCTGTTTGCTCACTGCCGCATGTGGACATCGTCCGCCTGCCCCCTCCATTGCCCTCTAGGAGCACTCACAATGGCACGCGGAATTAATAAAGTGATCCTAGTCGGAAACCTGGGAAACGAGCCAGATATTAAATACACCCAAAGTGGCATGACGATCACCAGCATTAGCCTAGCAACCAGCAGCAAACACAAGGACAGAGAGGGCAATACCCAGGAGCGGACCGAATGGCACCGCGTCAAGTTTTTCGGAAAACTGGGCGAGATTGCCGCCGAATATCTGCACAAGGGATCGCAGTGCTACATAGAGGGCACCATCCGTTACGACAAATTCACCGGCAATGATGGGCAGGACCGTTATGTCACTGAGATTATTGCTAACCAAATGCACATGCTCGGCGGTCGCGGTGAAGGCTCCAGCGGCATCACGCCACAGCAGCGACCGGCAAAGGTCCGTAACAACGATAAAGCCTATGCGTATGCAGGCGACGACTTCCACGATGACGCCCCCCCCGTTTTAGCCGAGCAGGAATCAGACAATGATGAATGCGCCAGTAAAACAAATGCATGACACTCCGTCGTCTATTGAGCACCGCCTGCCGGATATCTACACCTTCCACGACTTGCAGTTGCTTTGTGGCAGAGGAAAAAAAGTTAAACGTGCGCGCGTCGAAGAATGGGCGCGGCGACAAGGCATCCCCTACAAGTACGACGGAGAGGGTGGAATCTGGACCACACTCCAAGCACTCAATGCCGCACTGGGGATCGGCACCGACCTAGACGACGTACCATACCGACCAGAGGACTTGGTGTA	NA	NA	NA	NA
>prophage 10
NZ_CP006740	Xylella fastidiosa MUL0034, complete genome	2642186	1774387	1797467	2642186	plate,tail,head	Haemophilus_phage(28.57%)	28	NA	NA
WP_038227869.1|1774387_1777171_-	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	24.1	2.1e-45
WP_004089938.1|1777387_1777861_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_040123248.1|1779518_1780682_-|tail	tail fiber protein	tail	A4PE46	Ralstonia_virus	32.7	8.5e-09
WP_038230308.1|1780685_1781246_-	DUF2612 domain-containing protein	NA	A0A0M5M1K4	Salmonella_phage	26.1	1.4e-06
WP_011097984.1|1781242_1782388_-|plate	baseplate J/gp47 family protein	plate	D0UIH5	Aggregatibacter_phage	49.2	2.1e-97
WP_004089252.1|1782486_1782783_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	58.1	3.3e-26
WP_038211623.1|1782786_1783092_+	putative addiction module antidote protein	NA	A4JWV1	Burkholderia_virus	43.6	2.4e-11
WP_040123249.1|1783102_1783456_-	hypothetical protein	NA	Q7Y5S5	Haemophilus_phage	50.4	1.7e-24
WP_040123250.1|1783452_1784094_-	hypothetical protein	NA	A0A2H4J8H6	uncultured_Caudovirales_phage	37.3	2.5e-31
WP_038230303.1|1784090_1784921_-	hypothetical protein	NA	D0UIH8	Aggregatibacter_phage	51.1	3.4e-76
WP_012382585.1|1784917_1785235_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024749166.1|1786092_1786392_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	49.5	3.9e-19
WP_004085003.1|1786395_1786704_+	putative addiction module antidote protein	NA	A4JWV1	Burkholderia_virus	46.7	1.4e-16
WP_038230294.1|1786777_1788667_-	hypothetical protein	NA	D0UII2	Aggregatibacter_phage	28.0	1.8e-24
WP_004085005.1|1788814_1789237_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123251.1|1789233_1789671_-	DUF3277 family protein	NA	Q7Y5T4	Haemophilus_phage	61.7	4.0e-44
WP_038230289.1|1789680_1791177_-	DUF3383 domain-containing protein	NA	Q7Y5T5	Haemophilus_phage	48.0	1.2e-124
WP_038211636.1|1791177_1791648_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021358622.1|1791634_1792003_-	hypothetical protein	NA	Q776V7	Haemophilus_phage	40.7	6.3e-19
WP_027700647.1|1791989_1792469_-	hypothetical protein	NA	M4SN98	Psychrobacter_phage	28.7	8.6e-08
WP_004085010.1|1792465_1792837_-	DUF4054 domain-containing protein	NA	Q7Y5T9	Haemophilus_phage	38.3	5.2e-13
WP_038230286.1|1792839_1793175_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038230284.1|1793239_1794223_-	DUF2184 domain-containing protein	NA	A0A2R3UA82	Siphoviridae_environmental_samples	38.7	1.9e-49
WP_038230283.1|1794232_1794715_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123252.1|1794724_1795933_-	DUF2213 domain-containing protein	NA	H9C194	Pectobacterium_phage	42.2	1.5e-40
WP_040123253.1|1795932_1796778_-|head	phage head morphogenesis protein	head	Q7Y5U5	Haemophilus_phage	34.2	9.8e-31
WP_038230273.1|1796850_1797189_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_004090283.1|1797185_1797467_+	XRE family transcriptional regulator	NA	A0A2D1GR59	Pseudomonas_phage	45.2	6.8e-13
>prophage 11
NZ_CP006740	Xylella fastidiosa MUL0034, complete genome	2642186	1800487	1825530	2642186	integrase,terminase	Xylella_phage(60.87%)	37	1807258:1807271	1828905:1828918
WP_038230550.1|1800487_1802038_-|terminase	phage terminase large subunit	terminase	H9C0C7	Vibrio_phage	44.3	1.2e-111
WP_020853032.1|1801988_1802387_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123254.1|1802477_1802690_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123255.1|1802691_1803153_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011097940.1|1803142_1803454_-	hypothetical protein	NA	A0A172PZR6	Pseudomonas_phage	44.0	7.0e-19
WP_038230262.1|1803464_1803965_-	lysozyme	NA	I2GUG4	Acinetobacter_phage	51.7	4.3e-26
WP_004089578.1|1804167_1804506_-	BrnA antitoxin family protein	NA	K4NZP3	Burkholderia_phage	54.9	1.0e-07
WP_004089577.1|1804492_1804759_-	hypothetical protein	NA	K4NX81	Burkholderia_phage	40.7	1.8e-07
WP_040123256.1|1804947_1805646_-	hypothetical protein	NA	C8CLH7	Xylella_phage	81.7	1.6e-100
WP_038211646.1|1805774_1806185_-	hypothetical protein	NA	A0A088F6Y8	Sulfitobacter_phage	43.1	8.4e-12
WP_038230254.1|1806190_1807651_-	replicative DNA helicase	NA	O80281	Escherichia_phage	39.3	1.3e-70
1807258:1807271	attL	TGCCCACGTCGATC	NA	NA	NA	NA
WP_040123257.1|1807647_1808496_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038230249.1|1808497_1808776_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123376.1|1808754_1809864_-	hypothetical protein	NA	C8CLG1	Xylella_phage	56.9	3.1e-109
WP_038230245.1|1809929_1810511_-	hypothetical protein	NA	A4PE61	Ralstonia_virus	46.7	8.2e-21
WP_038230243.1|1810795_1811044_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038230241.1|1811040_1811229_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155266605.1|1811289_1811787_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123259.1|1812107_1812782_+	helix-turn-helix transcriptional regulator	NA	A0A0M3LQ62	Mannheimia_phage	31.7	1.5e-18
WP_004087046.1|1813440_1813629_-	antitoxin VbhA family protein	NA	NA	NA	NA	NA
WP_038230236.1|1814008_1814464_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038230234.1|1814460_1814886_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038230232.1|1814882_1815353_+	DUF1566 domain-containing protein	NA	NA	NA	NA	NA
WP_038230230.1|1815349_1815757_+	hypothetical protein	NA	C8CLG7	Xylella_phage	85.2	9.4e-56
WP_004087232.1|1815753_1815945_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040123260.1|1815968_1816160_+	hypothetical protein	NA	C8CLG6	Xylella_phage	78.1	2.1e-18
WP_004086187.1|1816191_1816386_+	hypothetical protein	NA	C8CLG5	Xylella_phage	98.4	1.6e-26
WP_016024077.1|1816385_1816874_+	hypothetical protein	NA	C8CLG4	Xylella_phage	100.0	1.5e-63
WP_040123261.1|1816870_1818151_+	DUF2800 domain-containing protein	NA	C8CLG3	Xylella_phage	97.7	7.4e-240
WP_016024075.1|1818147_1818714_+	DUF2815 family protein	NA	C8CLG2	Xylella_phage	100.0	5.2e-105
WP_040123377.1|1818839_1820003_+	hypothetical protein	NA	C8CLG1	Xylella_phage	81.6	1.4e-173
WP_040123262.1|1820004_1822185_+	DNA polymerase	NA	C8CLG0	Xylella_phage	94.8	0.0e+00
WP_038230497.1|1822181_1822460_+	VRR-NUC domain-containing protein	NA	C8CLF9	Xylella_phage	95.6	7.3e-44
WP_040123181.1|1822461_1822767_-	DUF1640 domain-containing protein	NA	NA	NA	NA	NA
WP_040123263.1|1822851_1824270_+	DEAD/DEAH box helicase	NA	C8CLF7	Xylella_phage	97.9	2.5e-273
WP_080703203.1|1824266_1824521_+	DUF4224 domain-containing protein	NA	C8CLF5	Xylella_phage	92.5	1.8e-36
WP_038229700.1|1824510_1825530_+|integrase	tyrosine-type recombinase/integrase	integrase	C8CLF4	Xylella_phage	86.7	2.5e-166
1828905:1828918	attR	GATCGACGTGGGCA	NA	NA	NA	NA
>prophage 12
NZ_CP006740	Xylella fastidiosa MUL0034, complete genome	2642186	1884370	1919202	2642186	portal,head	Xylella_phage(94.74%)	43	NA	NA
WP_038230190.1|1884370_1884703_-	DNA-binding transcriptional regulator	NA	A0A0P0IRJ4	Acinetobacter_phage	39.8	2.4e-17
WP_040123165.1|1884891_1886394_-	hypothetical protein	NA	C8CLJ8	Xylella_phage	94.0	6.2e-246
WP_038230599.1|1886390_1887173_-	hypothetical protein	NA	C8CLJ7	Xylella_phage	89.6	1.0e-127
WP_020850879.1|1887259_1887505_+	hypothetical protein	NA	C8CLJ6	Xylella_phage	90.1	2.7e-34
WP_080703200.1|1887470_1887905_+	DUF2335 domain-containing protein	NA	C8CLJ5	Xylella_phage	64.9	3.2e-30
WP_128283847.1|1888013_1888217_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020850878.1|1888213_1889983_-	hypothetical protein	NA	C8CLJ3	Xylella_phage	89.7	3.6e-277
WP_040123166.1|1889986_1891195_-	hypothetical protein	NA	C8CLJ2	Xylella_phage	98.8	2.2e-217
WP_038230533.1|1891198_1891906_-	hypothetical protein	NA	C8CLJ1	Xylella_phage	79.6	6.8e-94
WP_040123167.1|1891936_1892182_-	hypothetical protein	NA	C8CLJ0	Xylella_phage	100.0	8.4e-36
WP_016024102.1|1892151_1894080_-|head	head completion protein	head	C8CLI9	Xylella_phage	100.0	0.0e+00
WP_016024101.1|1894076_1894484_-	DNA stabilization protein	NA	C8CLI8	Xylella_phage	100.0	1.9e-69
WP_040123168.1|1894504_1895731_-	hypothetical protein	NA	C8CLI7	Xylella_phage	99.8	1.9e-229
WP_016024099.1|1895778_1896633_-	hypothetical protein	NA	C8CLI6	Xylella_phage	100.0	2.7e-129
WP_016024098.1|1896634_1898707_-|portal	portal protein	portal	C8CLI5	Xylella_phage	100.0	0.0e+00
WP_080679723.1|1898709_1900125_-	DNA packaging protein	NA	C8CLI4	Xylella_phage	100.0	3.5e-283
WP_016024096.1|1900033_1900360_-	hypothetical protein	NA	C8CLI3	Xylella_phage	100.0	7.0e-54
WP_016024095.1|1900359_1900674_-	hypothetical protein	NA	C8CLI2	Xylella_phage	100.0	7.5e-53
WP_038230362.1|1900670_1901216_-	hypothetical protein	NA	C8CLI0	Xylella_phage	99.4	7.8e-82
WP_051606210.1|1901212_1901704_-	lysozyme	NA	C8CLH9	Xylella_phage	98.8	3.4e-92
WP_152534392.1|1901681_1901915_-	hypothetical protein	NA	C8CLH8	Xylella_phage	98.7	3.3e-37
WP_040123171.1|1902039_1902747_-	hypothetical protein	NA	C8CLH7	Xylella_phage	97.4	2.6e-125
WP_040123172.1|1903021_1905550_-	DNA primase	NA	C8CLH6	Xylella_phage	77.2	0.0e+00
WP_040123271.1|1905685_1906279_-	hypothetical protein	NA	C8CLH5	Xylella_phage	56.9	1.6e-48
WP_080703204.1|1906275_1906539_-	hypothetical protein	NA	C8CLH4	Xylella_phage	69.8	1.2e-27
WP_016024085.1|1906535_1906919_-	hypothetical protein	NA	C8CLH2	Xylella_phage	100.0	1.1e-66
WP_155266607.1|1907118_1907664_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038230585.1|1907723_1907960_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_038230581.1|1908042_1908798_+	helix-turn-helix transcriptional regulator	NA	Q7Y5W5	Haemophilus_phage	33.8	3.0e-07
WP_038230385.1|1908979_1909528_+	hypothetical protein	NA	C8CLG9	Xylella_phage	36.6	2.0e-08
WP_051606211.1|1909524_1909938_+	hypothetical protein	NA	C8CLG9	Xylella_phage	63.9	1.1e-35
WP_004088545.1|1909934_1910396_+	DUF1566 domain-containing protein	NA	NA	NA	NA	NA
WP_004088547.1|1910395_1910797_+	hypothetical protein	NA	C8CLG7	Xylella_phage	66.2	3.6e-44
WP_020852641.1|1910793_1910988_+	hypothetical protein	NA	C8CLG6	Xylella_phage	82.8	7.2e-22
WP_016024078.1|1911019_1911214_+	hypothetical protein	NA	C8CLG5	Xylella_phage	100.0	3.3e-27
WP_040123100.1|1911203_1911701_+	hypothetical protein	NA	C8CLG4	Xylella_phage	93.4	1.9e-50
WP_040123273.1|1911697_1912978_+	DUF2800 domain-containing protein	NA	C8CLG3	Xylella_phage	97.9	6.7e-241
WP_040123098.1|1912974_1913541_+	DUF2815 family protein	NA	C8CLG2	Xylella_phage	95.2	1.7e-100
WP_155266615.1|1913666_1914824_+	hypothetical protein	NA	C8CLG1	Xylella_phage	93.1	3.5e-204
WP_040123274.1|1914825_1917006_+	DNA polymerase	NA	C8CLG0	Xylella_phage	95.0	0.0e+00
WP_038230497.1|1917002_1917281_+	VRR-NUC domain-containing protein	NA	C8CLF9	Xylella_phage	95.6	7.3e-44
WP_040123096.1|1917282_1917699_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123275.1|1917783_1919202_+	DEAD/DEAH box helicase	NA	C8CLF7	Xylella_phage	98.1	1.1e-273
>prophage 13
NZ_CP006740	Xylella fastidiosa MUL0034, complete genome	2642186	1923171	1943258	2642186	plate,tail,head	Haemophilus_phage(28.57%)	28	NA	NA
WP_038211240.1|1923171_1924377_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0A7RTT7	Clostridium_phage	28.7	1.6e-34
WP_038211241.1|1924373_1925027_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123248.1|1925273_1926437_-|tail	tail fiber protein	tail	A4PE46	Ralstonia_virus	32.7	8.5e-09
WP_038230308.1|1926440_1927001_-	DUF2612 domain-containing protein	NA	A0A0M5M1K4	Salmonella_phage	26.1	1.4e-06
WP_011097984.1|1926997_1928143_-|plate	baseplate J/gp47 family protein	plate	D0UIH5	Aggregatibacter_phage	49.2	2.1e-97
WP_004085590.1|1928245_1928542_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	54.7	9.0e-24
WP_004085592.1|1928544_1928838_+	putative addiction module antidote protein	NA	A4JWV1	Burkholderia_virus	37.9	6.2e-09
WP_040123277.1|1928893_1929247_-	hypothetical protein	NA	Q7Y5S5	Haemophilus_phage	50.4	1.3e-24
WP_040123250.1|1929243_1929885_-	hypothetical protein	NA	A0A2H4J8H6	uncultured_Caudovirales_phage	37.3	2.5e-31
WP_038230303.1|1929881_1930712_-	hypothetical protein	NA	D0UIH8	Aggregatibacter_phage	51.1	3.4e-76
WP_012382585.1|1930708_1931026_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024749166.1|1931883_1932183_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	49.5	3.9e-19
WP_004085003.1|1932186_1932495_+	putative addiction module antidote protein	NA	A4JWV1	Burkholderia_virus	46.7	1.4e-16
WP_038230294.1|1932568_1934458_-	hypothetical protein	NA	D0UII2	Aggregatibacter_phage	28.0	1.8e-24
WP_004085005.1|1934605_1935028_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123251.1|1935024_1935462_-	DUF3277 family protein	NA	Q7Y5T4	Haemophilus_phage	61.7	4.0e-44
WP_038230289.1|1935471_1936968_-	DUF3383 domain-containing protein	NA	Q7Y5T5	Haemophilus_phage	48.0	1.2e-124
WP_038211636.1|1936968_1937439_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021358622.1|1937425_1937794_-	hypothetical protein	NA	Q776V7	Haemophilus_phage	40.7	6.3e-19
WP_027700647.1|1937780_1938260_-	hypothetical protein	NA	M4SN98	Psychrobacter_phage	28.7	8.6e-08
WP_004085010.1|1938256_1938628_-	DUF4054 domain-containing protein	NA	Q7Y5T9	Haemophilus_phage	38.3	5.2e-13
WP_038230286.1|1938630_1938966_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123278.1|1939030_1940014_-	DUF2184 domain-containing protein	NA	A0A2R3UA82	Siphoviridae_environmental_samples	38.7	1.9e-49
WP_038230283.1|1940023_1940506_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123252.1|1940515_1941724_-	DUF2213 domain-containing protein	NA	H9C194	Pectobacterium_phage	42.2	1.5e-40
WP_040123253.1|1941723_1942569_-|head	phage head morphogenesis protein	head	Q7Y5U5	Haemophilus_phage	34.2	9.8e-31
WP_038230273.1|1942641_1942980_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_004090283.1|1942976_1943258_+	XRE family transcriptional regulator	NA	A0A2D1GR59	Pseudomonas_phage	45.2	6.8e-13
>prophage 14
NZ_CP006740	Xylella fastidiosa MUL0034, complete genome	2642186	1946277	1968472	2642186	terminase	Xylella_phage(36.84%)	36	NA	NA
WP_038230550.1|1946277_1947828_-|terminase	phage terminase large subunit	terminase	H9C0C7	Vibrio_phage	44.3	1.2e-111
WP_020853032.1|1947778_1948177_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123254.1|1948267_1948480_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040123255.1|1948481_1948943_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011097940.1|1948932_1949244_-	hypothetical protein	NA	A0A172PZR6	Pseudomonas_phage	44.0	7.0e-19
WP_038230262.1|1949254_1949755_-	lysozyme	NA	I2GUG4	Acinetobacter_phage	51.7	4.3e-26
WP_080703205.1|1950849_1951014_-	Arc family DNA-binding protein	NA	NA	NA	NA	NA
WP_051606226.1|1951115_1951517_+	Arc family DNA-binding protein	NA	A0A0U4B0M9	Pseudomonas_phage	53.3	1.1e-05
WP_040123279.1|1951545_1952244_-	hypothetical protein	NA	C8CLH7	Xylella_phage	84.3	1.0e-102
WP_038211646.1|1952372_1952783_-	hypothetical protein	NA	A0A088F6Y8	Sulfitobacter_phage	43.1	8.4e-12
WP_038228265.1|1952830_1953520_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038229974.1|1953500_1954388_-	YdaU family protein	NA	A0A0P0I481	Acinetobacter_phage	44.0	2.0e-18
WP_040123381.1|1954384_1955494_-	hypothetical protein	NA	C8CLG1	Xylella_phage	55.6	1.5e-108
WP_040123280.1|1955523_1956312_-	hypothetical protein	NA	C8CLH5	Xylella_phage	57.7	8.5e-29
WP_080703220.1|1956308_1956911_-	hypothetical protein	NA	C8CLH5	Xylella_phage	86.2	2.7e-51
WP_038229950.1|1957168_1957534_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038211688.1|1957530_1957779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020851634.1|1957775_1957964_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155238084.1|1958024_1958171_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152550752.1|1958511_1958829_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_051248012.1|1958813_1959578_+	helix-turn-helix transcriptional regulator	NA	A0A0U1SXS9	Pseudomonas_phage	28.1	7.5e-06
WP_027700612.1|1959635_1960154_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004086345.1|1960176_1960467_+	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_020852210.1|1960463_1960832_+	DUF86 domain-containing protein	NA	NA	NA	NA	NA
WP_155238083.1|1960850_1961024_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027700613.1|1961077_1961422_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038229963.1|1961715_1962123_+	hypothetical protein	NA	C8CLG7	Xylella_phage	84.4	4.2e-56
WP_004086365.1|1962119_1962311_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038229943.1|1962354_1962879_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038229961.1|1962997_1963189_+	hypothetical protein	NA	C8CLG6	Xylella_phage	70.3	2.9e-15
WP_038229942.1|1963209_1963554_+	hypothetical protein	NA	U5P4J6	Shigella_phage	45.5	3.6e-16
WP_040123282.1|1963593_1964415_+	DUF2303 family protein	NA	K7ZMK3	Xanthomonas_citri_phage	43.3	1.2e-54
WP_038229940.1|1964430_1965366_+	phage recombination protein Bet	NA	U6C6J0	Ralstonia_phage	48.9	1.4e-57
WP_040123283.1|1965362_1967015_+	hypothetical protein	NA	U6C712	Ralstonia_phage	37.0	1.1e-94
WP_038229937.1|1967368_1967959_+	phage antirepressor protein	NA	C8CLH5	Xylella_phage	67.8	5.0e-50
WP_038229935.1|1968025_1968472_+	single-stranded DNA-binding protein	NA	L7TJL2	Pseudomonas_virus	54.1	4.5e-35
