assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000696675.2_ASM69667v2	NZ_CP007255	Rhodococcus erythropolis R138 chromosome, complete genome	1	545903-546023	1	CRISPRCasFinder	no		cas3,csa3,RT,WYL,DEDDh,DinG,cas4	Orphan	CAGGGTGTCGGCACCAACGCCCTCGTCGACAACCCGTTCA	40	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,RT,WYL,DEDDh,DinG,cas4	NA|416aa|up_8|NZ_CP007255.1_537175_538423_+,NA|151aa|up_6|NZ_CP007255.1_540141_540594_+,NA	NA|196aa|up_9|NZ_CP007255.1_536569_537157_-	pfam04978, DUF664, Protein of unknown function (DUF664)	NA|416aa|up_8|NZ_CP007255.1_537175_538423_+	NA	NA|549aa|up_7|NZ_CP007255.1_538491_540138_+	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|151aa|up_6|NZ_CP007255.1_540141_540594_+	NA	NA|98aa|up_5|NZ_CP007255.1_540590_540884_+	pfam09851, SHOCT, Short C-terminal domain	NA|229aa|up_4|NZ_CP007255.1_540885_541572_-	TIGR03605, antibiot_sagB, SagB-type dehydrogenase domain	NA|327aa|up_3|NZ_CP007255.1_541576_542557_-	cd01148, TroA_a, Metal binding protein TroA_a	NA|265aa|up_2|NZ_CP007255.1_542553_543348_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|356aa|up_1|NZ_CP007255.1_543344_544412_-	pfam01032, FecCD, FecCD transport family	NA|420aa|up_0|NZ_CP007255.1_544496_545756_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|271aa|down_0|NZ_CP007255.1_546131_546944_+	TIGR03882, hypothetical_protein, bacteriocin biosynthesis cyclodehydratase domain	NA|476aa|down_1|NZ_CP007255.1_546940_548368_+	COG2936, COG2936, Predicted acyl esterases [General function prediction only]	NA|447aa|down_2|NZ_CP007255.1_548360_549701_+	TIGR03604, hypothetical_protein, thiazole/oxazole-forming peptide maturase, SagD family component	NA|431aa|down_3|NZ_CP007255.1_549697_550990_+	TIGR03604, hypothetical_protein, thiazole/oxazole-forming peptide maturase, SagD family component	NA|324aa|down_4|NZ_CP007255.1_550936_551908_-	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]	NA|209aa|down_5|NZ_CP007255.1_551959_552586_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|147aa|down_6|NZ_CP007255.1_552593_553034_-	pfam13426, PAS_9, PAS domain	NA|247aa|down_7|NZ_CP007255.1_553145_553886_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|374aa|down_8|NZ_CP007255.1_553882_555004_-	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|401aa|down_9|NZ_CP007255.1_555043_556246_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]
GCF_000696675.2_ASM69667v2	NZ_CP007255	Rhodococcus erythropolis R138 chromosome, complete genome	2	4692822-4692907	2	CRISPRCasFinder	no		cas3,csa3,RT,WYL,DEDDh,DinG,cas4	Orphan	CGGCGGCGGCGCAGCATCCGGTG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,RT,WYL,DEDDh,DinG,cas4	NA,NA|117aa|down_1|NZ_CP007255.1_4693617_4693968_+	NA|285aa|up_9|NZ_CP007255.1_4678438_4679293_-	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism]	NA|547aa|up_8|NZ_CP007255.1_4679408_4681049_+	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	NA|114aa|up_7|NZ_CP007255.1_4681045_4681387_+	pfam13822, ACC_epsilon, Acyl-CoA carboxylase epsilon subunit	NA|214aa|up_6|NZ_CP007255.1_4681402_4682044_+	PRK00148, PRK00148, Maf-like protein; Reviewed	NA|566aa|up_5|NZ_CP007255.1_4683534_4685232_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|498aa|up_4|NZ_CP007255.1_4685382_4686876_+	pfam00668, Condensation, Condensation domain	NA|488aa|up_3|NZ_CP007255.1_4686875_4688339_+	pfam00668, Condensation, Condensation domain	NA|302aa|up_2|NZ_CP007255.1_4688457_4689363_+	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|139aa|up_1|NZ_CP007255.1_4689359_4689776_+	pfam02657, SufE, Fe-S metabolism associated domain	NA|467aa|up_0|NZ_CP007255.1_4689780_4691181_+	pfam00668, Condensation, Condensation domain	NA|142aa|down_0|NZ_CP007255.1_4693192_4693618_+	pfam08044, DUF1707, Domain of unknown function (DUF1707)	NA|117aa|down_1|NZ_CP007255.1_4693617_4693968_+	NA	NA|121aa|down_2|NZ_CP007255.1_4693964_4694327_+	COG5652, COG5652, Predicted integral membrane protein [Function unknown]	NA|267aa|down_3|NZ_CP007255.1_4694327_4695128_-	pfam13350, Y_phosphatase3, Tyrosine phosphatase family	NA|173aa|down_4|NZ_CP007255.1_4695244_4695763_+	PRK13798, PRK13798, putative OHCU decarboxylase; Provisional	NA|110aa|down_5|NZ_CP007255.1_4695759_4696089_+	pfam00576, Transthyretin, HIUase/Transthyretin family	NA|316aa|down_6|NZ_CP007255.1_4696123_4697071_+	TIGR03383, Structure_Of_Uricase, urate oxidase	NA|457aa|down_7|NZ_CP007255.1_4697067_4698438_+	PRK08203, PRK08203, hydroxydechloroatrazine ethylaminohydrolase; Reviewed	NA|270aa|down_8|NZ_CP007255.1_4698445_4699255_+	pfam00941, FAD_binding_5, FAD binding domain in molybdopterin dehydrogenase	NA|904aa|down_9|NZ_CP007255.1_4699251_4701963_+	PRK09800, PRK09800, putative hypoxanthine oxidase; Provisional
GCF_000696675.2_ASM69667v2	NZ_CP007257	Rhodococcus erythropolis R138 plasmid pLRE138, complete sequence	1	91436-91534	1	CRISPRCasFinder	no		DEDDh	Orphan	CCCGGATTGCAGATCGGACTCGCC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,RT,WYL,DEDDh,DinG,cas4	NA,NA|76aa|down_0|NZ_CP007257.1_91700_91928_+	NA|50aa|up_9|NZ_CP007257.1_82284_82434_+	pfam01527, HTH_Tnp_1, Transposase	NA|354aa|up_8|NZ_CP007257.1_82996_84058_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|101aa|up_7|NZ_CP007257.1_85955_86258_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|356aa|up_6|NZ_CP007257.1_86228_87296_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|102aa|up_5|NZ_CP007257.1_87118_87424_-	pfam01527, HTH_Tnp_1, Transposase	NA|136aa|up_4|NZ_CP007257.1_87481_87889_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|405aa|up_3|NZ_CP007257.1_88132_89347_-	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]	NA|136aa|up_2|NZ_CP007257.1_89375_89783_-	cd06284, PBP1_LacI-like, ligand-binding domain of an uncharacterized transcription regulator from Actinobacillus succinogenes and its close homologs from other bacteria	NA|163aa|up_1|NZ_CP007257.1_89902_90391_-	COG1846, MarR, Transcriptional regulators [Transcription]	NA|191aa|up_0|NZ_CP007257.1_90518_91091_+	COG2085, COG2085, Predicted dinucleotide-binding enzymes [General function prediction only]	NA|76aa|down_0|NZ_CP007257.1_91700_91928_+	NA	NA|163aa|down_1|NZ_CP007257.1_93572_94061_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|381aa|down_2|NZ_CP007257.1_94253_95396_-	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]	NA|400aa|down_3|NZ_CP007257.1_95392_96592_-	cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family	NA|233aa|down_4|NZ_CP007257.1_96656_97355_-	COG2964, COG2964, Uncharacterized protein conserved in bacteria [Function unknown]	NA|433aa|down_5|NZ_CP007257.1_97587_98886_+	cd17367, MFS_KgtP, Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters	NA|479aa|down_6|NZ_CP007257.1_99058_100495_+	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|102aa|down_7|NZ_CP007257.1_101493_101799_+	pfam01527, HTH_Tnp_1, Transposase	NA|356aa|down_8|NZ_CP007257.1_101621_102689_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|405aa|down_9|NZ_CP007257.1_102815_104030_-	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
