assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000691565.1_ASM69156v1	NZ_CP007620	Pseudomonas putida strain DLL-E4 chromosome, complete genome	1	1475519-1475619	1	CRISPRCasFinder	no		WYL,DEDDh,cas3,csa3,casR,DinG,RT	Orphan	AGTCCGTCCGTATTACTAATGGC	23	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,cas3,csa3,casR,DinG,RT	NA|186aa|up_8|NZ_CP007620.1_1464106_1464664_+,NA|342aa|up_4|NZ_CP007620.1_1469525_1470551_+,NA|107aa|down_0|NZ_CP007620.1_1475846_1476167_-,NA|292aa|down_6|NZ_CP007620.1_1482053_1482929_-,NA|145aa|down_9|NZ_CP007620.1_1484924_1485359_+	NA|252aa|up_9|NZ_CP007620.1_1463299_1464055_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|186aa|up_8|NZ_CP007620.1_1464106_1464664_+	NA	NA|490aa|up_7|NZ_CP007620.1_1464750_1466220_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|526aa|up_6|NZ_CP007620.1_1466298_1467876_+	PRK00074, guaA, GMP synthase; Reviewed	NA|404aa|up_5|NZ_CP007620.1_1468183_1469395_+	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|342aa|up_4|NZ_CP007620.1_1469525_1470551_+	NA	NA|317aa|up_3|NZ_CP007620.1_1470776_1471727_-	TIGR00721, Tfx_protein, DNA-binding protein, Tfx family	NA|511aa|up_2|NZ_CP007620.1_1471957_1473490_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|119aa|up_1|NZ_CP007620.1_1473508_1473865_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|51aa|up_0|NZ_CP007620.1_1473924_1474077_+	pfam05930, Phage_AlpA, Prophage CP4-57 regulatory protein (AlpA)	NA|107aa|down_0|NZ_CP007620.1_1475846_1476167_-	NA	NA|529aa|down_1|NZ_CP007620.1_1476169_1477756_-	TIGR02783, probable_conjugal_transfer_protein_TrbL, P-type conjugative transfer protein TrbL	NA|280aa|down_2|NZ_CP007620.1_1477949_1478789_-	TIGR02780, TrbJ_protein, P-type conjugative transfer protein TrbJ	NA|122aa|down_3|NZ_CP007620.1_1479010_1479376_-	pfam17273, DUF5338, Family of unknown function (DUF5338)	NA|124aa|down_4|NZ_CP007620.1_1479676_1480048_+	PRK13877, PRK13877, conjugal transfer transcriptional regulator TraJ	NA|491aa|down_5|NZ_CP007620.1_1480592_1482065_+	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX	NA|292aa|down_6|NZ_CP007620.1_1482053_1482929_-	NA	NA|55aa|down_7|NZ_CP007620.1_1482940_1483105_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|315aa|down_8|NZ_CP007620.1_1483804_1484749_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|145aa|down_9|NZ_CP007620.1_1484924_1485359_+	NA
GCF_000691565.1_ASM69156v1	NZ_CP007620	Pseudomonas putida strain DLL-E4 chromosome, complete genome	2	2581776-2581880	2	CRISPRCasFinder	no		WYL,DEDDh,cas3,csa3,casR,DinG,RT	Orphan	CATCGAGGGTGGCGACGGCAACGA	24	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,cas3,csa3,casR,DinG,RT	NA,NA|190aa|down_8|NZ_CP007620.1_2599693_2600263_-	NA|315aa|up_9|NZ_CP007620.1_2559892_2560837_+	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold	NA|471aa|up_8|NZ_CP007620.1_2561018_2562431_+	PLN02880, PLN02880, tyrosine decarboxylase	NA|458aa|up_7|NZ_CP007620.1_2562705_2564079_-	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|636aa|up_6|NZ_CP007620.1_2564369_2566277_+	COG3185, COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]	NA|223aa|up_5|NZ_CP007620.1_2566421_2567090_-	pfam13489, Methyltransf_23, Methyltransferase domain	NA|454aa|up_4|NZ_CP007620.1_2567117_2568479_-	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family	NA|288aa|up_3|NZ_CP007620.1_2568496_2569360_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|443aa|up_2|NZ_CP007620.1_2569450_2570779_-	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|447aa|up_1|NZ_CP007620.1_2570780_2572121_-	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|579aa|up_0|NZ_CP007620.1_2572127_2573864_-	COG4618, ArpD, ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]	NA|162aa|down_0|NZ_CP007620.1_2585673_2586159_+	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle	NA|233aa|down_1|NZ_CP007620.1_2586679_2587378_-	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain	NA|839aa|down_2|NZ_CP007620.1_2587553_2590070_+	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|1600aa|down_3|NZ_CP007620.1_2590077_2594877_-	pfam14496, NEL, C-terminal novel E3 ligase, LRR-interacting	NA|309aa|down_4|NZ_CP007620.1_2595200_2596127_+	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|142aa|down_5|NZ_CP007620.1_2596483_2596909_+	cd07253, GLOD5, Human glyoxalase domain-containing protein 5 and similar proteins	NA|260aa|down_6|NZ_CP007620.1_2596905_2597685_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|559aa|down_7|NZ_CP007620.1_2597901_2599578_+	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|190aa|down_8|NZ_CP007620.1_2599693_2600263_-	NA	NA|226aa|down_9|NZ_CP007620.1_2600374_2601052_+	pfam12261, T_hemolysin, Thermostable hemolysin
GCF_000691565.1_ASM69156v1	NZ_CP007620	Pseudomonas putida strain DLL-E4 chromosome, complete genome	3	2824221-2824309	3	CRISPRCasFinder	no		WYL,DEDDh,cas3,csa3,casR,DinG,RT	Orphan	TCACGGTCGTTGGCAAAGTTGCC	23	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,cas3,csa3,casR,DinG,RT	NA|79aa|up_6|NZ_CP007620.1_2815158_2815395_+,NA|89aa|down_4|NZ_CP007620.1_2830053_2830320_-,NA|203aa|down_9|NZ_CP007620.1_2834703_2835312_+	NA|422aa|up_9|NZ_CP007620.1_2810237_2811503_-	cd06174, MFS, Major Facilitator Superfamily	NA|357aa|up_8|NZ_CP007620.1_2811536_2812607_-	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel	NA|502aa|up_7|NZ_CP007620.1_2812718_2814224_-	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|79aa|up_6|NZ_CP007620.1_2815158_2815395_+	NA	NA|848aa|up_5|NZ_CP007620.1_2816059_2818603_+	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|305aa|up_4|NZ_CP007620.1_2818625_2819540_-	cd08412, PBP2_PAO1_like, The C-terminal substrate-binding domain of putative LysR-type transcriptional regulator PAO1-like, a member of the type 2 periplasmic binding fold protein superfamily	NA|323aa|up_3|NZ_CP007620.1_2819739_2820708_+	cd13641, PBP2_HisX_like, Substrate-binding domain of ABC-type histidine transporter involves in betaine and proline uptake; the type 2 periplasmic-binding protein fold	NA|284aa|up_2|NZ_CP007620.1_2820783_2821635_+	COG4176, ProW, ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism]	NA|278aa|up_1|NZ_CP007620.1_2821631_2822465_+	COG4175, ProV, ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]	NA|508aa|up_0|NZ_CP007620.1_2822477_2824001_+	COG2986, HutH, Histidine ammonia-lyase [Amino acid transport and metabolism]	NA|442aa|down_0|NZ_CP007620.1_2824566_2825892_-	PRK06139, PRK06139, SDR family oxidoreductase	NA|543aa|down_1|NZ_CP007620.1_2826252_2827881_+	pfam00924, MS_channel, Mechanosensitive ion channel	NA|413aa|down_2|NZ_CP007620.1_2828006_2829245_-	COG3174, COG3174, Predicted membrane protein [Function unknown]	NA|274aa|down_3|NZ_CP007620.1_2829229_2830051_-	PRK11161, PRK11161, fumarate/nitrate reduction transcriptional regulator Fnr	NA|89aa|down_4|NZ_CP007620.1_2830053_2830320_-	NA	NA|309aa|down_5|NZ_CP007620.1_2830674_2831601_+	PRK11175, PRK11175, universal stress protein UspE; Provisional	NA|183aa|down_6|NZ_CP007620.1_2831628_2832177_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|305aa|down_7|NZ_CP007620.1_2832363_2833278_+	cd00293, USP_Like, Usp: Universal stress protein family	NA|456aa|down_8|NZ_CP007620.1_2833280_2834648_+	COG1236, YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis]	NA|203aa|down_9|NZ_CP007620.1_2834703_2835312_+	NA
GCF_000691565.1_ASM69156v1	NZ_CP007620	Pseudomonas putida strain DLL-E4 chromosome, complete genome	4	4608709-4608819	4	CRISPRCasFinder	no	RT	WYL,DEDDh,cas3,csa3,casR,DinG,RT	Unclear	GGCCCTTCGCGGGTAAACCCGCTCC	25	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,cas3,csa3,casR,DinG,RT	NA|98aa|up_1|NZ_CP007620.1_4606748_4607042_+,NA	NA|111aa|up_9|NZ_CP007620.1_4596948_4597281_-	PRK00253, fliE, flagellar hook-basal body protein FliE; Reviewed	NA|452aa|up_8|NZ_CP007620.1_4597502_4598858_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|406aa|up_7|NZ_CP007620.1_4598857_4600075_-	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|353aa|up_6|NZ_CP007620.1_4600363_4601422_+	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|705aa|up_5|NZ_CP007620.1_4602261_4604376_+	PRK08869, PRK08869, polar flagellin E	NA|120aa|up_4|NZ_CP007620.1_4604450_4604810_+	pfam03646, FlaG, FlaG protein	NA|453aa|up_3|NZ_CP007620.1_4604893_4606252_+	pfam07195, FliD_C, Flagellar hook-associated protein 2 C-terminus	NA|132aa|up_2|NZ_CP007620.1_4606334_4606730_+	PRK05685, fliS, flagellar export chaperone FliS	NA|98aa|up_1|NZ_CP007620.1_4606748_4607042_+	NA	NA|492aa|up_0|NZ_CP007620.1_4607211_4608687_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|353aa|down_0|NZ_CP007620.1_4609074_4610133_-	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	RT|474aa|down_1|NZ_CP007620.1_4610526_4611948_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|310aa|down_2|NZ_CP007620.1_4612434_4613364_-	cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems	NA|522aa|down_3|NZ_CP007620.1_4613770_4615336_-	PRK12717, flgL, flagellar hook-associated protein 3	NA|681aa|down_4|NZ_CP007620.1_4615349_4617392_-	PRK05683, flgK, flagellar hook-associated protein FlgK; Validated	NA|385aa|down_5|NZ_CP007620.1_4617404_4618559_-	PRK05684, flgJ, flagellar assembly peptidoglycan hydrolase FlgJ	NA|372aa|down_6|NZ_CP007620.1_4618570_4619686_-	PRK05303, flgI, flagellar basal body P-ring protein FlgI	NA|232aa|down_7|NZ_CP007620.1_4619692_4620388_-	PRK00249, flgH, flagellar basal body L-ring protein FlgH	NA|262aa|down_8|NZ_CP007620.1_4620438_4621224_-	PRK12693, flgG, flagellar basal body rod protein FlgG; Provisional	NA|247aa|down_9|NZ_CP007620.1_4621271_4622012_-	PRK12640, flgF, flagellar basal body rod protein FlgF; Reviewed
