assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000689235.1_GBCO_p1	NZ_HG939456	Streptococcus agalactiae COH1	1	871649-872081	1,1	CRISPRCasFinder,CRT	no	RT,cas9,cas1,cas2,csn2	cas3,DinG,RT,cas9,cas1,cas2,csn2,csm6,DEDDh,csa3	Type II-A,Type II-B,Type II-C	AGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC,GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	37,36	0	0	NA	NA	II-A:II-A	5,6	6	TypeII-A,TypeII-B,TypeII-C	cas3,DinG,RT,cas9,cas1,cas2,csn2,csm6,DEDDh,csa3	NA,NA|46aa|down_0|NZ_HG939456.1_872359_872497_+	NA|124aa|up_9|NZ_HG939456.1_861138_861510_+	pfam08349, DUF1722, Protein of unknown function (DUF1722)	NA|127aa|up_8|NZ_HG939456.1_861534_861915_+	TIGR02328, TIGR02328, conserved hypothetical protein	NA|377aa|up_7|NZ_HG939456.1_862007_863138_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|246aa|up_6|NZ_HG939456.1_863141_863879_+	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase	NA|257aa|up_5|NZ_HG939456.1_863879_864650_+	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|219aa|up_4|NZ_HG939456.1_864639_865296_+	COG4478, COG4478, Predicted membrane protein [Function unknown]	cas9|1371aa|up_3|NZ_HG939456.1_865575_869688_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|290aa|up_2|NZ_HG939456.1_869689_870559_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|114aa|up_1|NZ_HG939456.1_870555_870897_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|222aa|up_0|NZ_HG939456.1_870883_871549_+	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	NA|46aa|down_0|NZ_HG939456.1_872359_872497_+	NA	NA|139aa|down_1|NZ_HG939456.1_872637_873054_+	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|611aa|down_2|NZ_HG939456.1_873189_875022_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|878aa|down_3|NZ_HG939456.1_875267_877901_+	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily	NA|220aa|down_4|NZ_HG939456.1_878000_878660_+	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|155aa|down_5|NZ_HG939456.1_878668_879133_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|146aa|down_6|NZ_HG939456.1_879132_879570_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|931aa|down_7|NZ_HG939456.1_879718_882511_+	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|368aa|down_8|NZ_HG939456.1_882510_883614_+	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|213aa|down_9|NZ_HG939456.1_883731_884370_-	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others
GCF_000689235.1_GBCO_p1	NZ_HG939456	Streptococcus agalactiae COH1	2	1934523-1934708	2	CRT	no		cas3,DinG,RT,cas9,cas1,cas2,csn2,csm6,DEDDh,csa3	Orphan	CTGGCTTANCNTCTGGTT	18	1	1	1934589-1934606	NZ_HG939456.1_1934697-1934714	NA	4	4	Orphan	cas3,DinG,RT,cas9,cas1,cas2,csn2,csm6,DEDDh,csa3	NA|203aa|up_7|NZ_HG939456.1_1923692_1924301_+,NA	NA|1572aa|up_9|NZ_HG939456.1_1916581_1921297_+	cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases	NA|463aa|up_8|NZ_HG939456.1_1922211_1923600_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|203aa|up_7|NZ_HG939456.1_1923692_1924301_+	NA	NA|834aa|up_6|NZ_HG939456.1_1924390_1926892_-	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|389aa|up_5|NZ_HG939456.1_1927107_1928274_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|416aa|up_4|NZ_HG939456.1_1928715_1929963_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|282aa|up_3|NZ_HG939456.1_1930005_1930851_-	cd07208, Pat_hypo_Ecoli_yjju_like, Hypothetical patatin similar to yjju protein of Escherichia coli	NA|399aa|up_2|NZ_HG939456.1_1931055_1932252_+	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|402aa|up_1|NZ_HG939456.1_1932316_1933522_+	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|180aa|up_0|NZ_HG939456.1_1933568_1934108_-	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|58aa|down_0|NZ_HG939456.1_1936195_1936369_-	COG0690, SecE, Preprotein translocase subunit SecE [Intracellular trafficking and secretion]	NA|51aa|down_1|NZ_HG939456.1_1936404_1936557_-	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|774aa|down_2|NZ_HG939456.1_1936605_1938927_-	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]	NA|295aa|down_3|NZ_HG939456.1_1938970_1939855_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|547aa|down_4|NZ_HG939456.1_1939879_1941520_-	COG4640, COG4640, Predicted membrane protein [Function unknown]	NA|404aa|down_5|NZ_HG939456.1_1941689_1942901_-	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|224aa|down_6|NZ_HG939456.1_1942967_1943639_-	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional	NA|401aa|down_7|NZ_HG939456.1_1943668_1944871_-	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|260aa|down_8|NZ_HG939456.1_1944891_1945671_-	cd17767, UP_EcUdp-like, uridine phosphorylases similar to Escherichia coli Udp and related phosphorylases	NA|246aa|down_9|NZ_HG939456.1_1945830_1946568_+	COG2188, PhnF, Transcriptional regulators [Transcription]
