assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000661895.1_ASM66189v1	NZ_CP007514	Rubrobacter radiotolerans strain RSPS-4, complete genome	1	24376-24537	1	CRISPRCasFinder	no		DEDDh,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,WYL	Orphan	CCGGAACCTCCGCCCGAGCCGCTG	24	1	1	24400-24417	NZ_CP007514.1_190282-190299	NA	3	3	Orphan	DEDDh,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,csx1,cas6	NA|211aa|up_2|NZ_CP007514.1_20565_21198_+,NA|83aa|up_0|NZ_CP007514.1_23969_24218_+,NA|346aa|down_6|NZ_CP007514.1_34306_35344_+	NA|597aa|up_9|NZ_CP007514.1_13930_15721_+	PRK07803, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed	NA|255aa|up_8|NZ_CP007514.1_15810_16575_+	PRK12386, PRK12386, fumarate reductase iron-sulfur subunit; Provisional	NA|180aa|up_7|NZ_CP007514.1_16755_17295_+	cd04511, Nudix_Hydrolase_4, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|311aa|up_6|NZ_CP007514.1_17301_18234_-	PRK02308, uvsE, putative UV damage endonuclease; Provisional	NA|195aa|up_5|NZ_CP007514.1_18280_18865_-	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|150aa|up_4|NZ_CP007514.1_19179_19629_-	pfam06271, RDD, RDD family	NA|269aa|up_3|NZ_CP007514.1_19751_20558_+	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs	NA|211aa|up_2|NZ_CP007514.1_20565_21198_+	NA	NA|859aa|up_1|NZ_CP007514.1_21204_23781_-	COG1236, YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis]	NA|83aa|up_0|NZ_CP007514.1_23969_24218_+	NA	NA|540aa|down_0|NZ_CP007514.1_26574_28194_-	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|442aa|down_1|NZ_CP007514.1_28198_29524_-	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning]	NA|455aa|down_2|NZ_CP007514.1_29527_30892_-	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|161aa|down_3|NZ_CP007514.1_30902_31385_-	pfam00498, FHA, FHA domain	NA|289aa|down_4|NZ_CP007514.1_31384_32251_-	pfam12401, DUF3662, Protein of unknown function (DUF2662)	NA|567aa|down_5|NZ_CP007514.1_32279_33980_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|346aa|down_6|NZ_CP007514.1_34306_35344_+	NA	NA|94aa|down_7|NZ_CP007514.1_35363_35645_+	pfam01037, AsnC_trans_reg, Lrp/AsnC ligand binding domain	NA|377aa|down_8|NZ_CP007514.1_35655_36786_-	PRK13517, PRK13517, glutamate--cysteine ligase	NA|235aa|down_9|NZ_CP007514.1_36894_37599_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins
GCF_000661895.1_ASM66189v1	NZ_CP007514	Rubrobacter radiotolerans strain RSPS-4, complete genome	2	809727-810005	1	PILER-CR	no		DEDDh,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,WYL	Orphan	TTACCAGGAAGCTATGCGCGGCATCT	26	0	0	NA	NA	NA	3	3	Orphan	DEDDh,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,csx1,cas6	NA|181aa|up_6|NZ_CP007514.1_803289_803832_+,NA|164aa|up_0|NZ_CP007514.1_808857_809349_-,NA|436aa|down_1|NZ_CP007514.1_811888_813196_-,NA|261aa|down_8|NZ_CP007514.1_818026_818809_-	NA|166aa|up_9|NZ_CP007514.1_801269_801767_+	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|154aa|up_8|NZ_CP007514.1_801778_802240_-	pfam01476, LysM, LysM domain	NA|218aa|up_7|NZ_CP007514.1_802413_803067_+	pfam04298, Zn_peptidase_2, Putative neutral zinc metallopeptidase	NA|181aa|up_6|NZ_CP007514.1_803289_803832_+	NA	NA|242aa|up_5|NZ_CP007514.1_803972_804698_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|326aa|up_4|NZ_CP007514.1_804705_805683_-	COG0392, COG0392, Predicted integral membrane protein [Function unknown]	NA|406aa|up_3|NZ_CP007514.1_805687_806905_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|378aa|up_2|NZ_CP007514.1_806915_808049_-	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1	NA|252aa|up_1|NZ_CP007514.1_808105_808861_-	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|164aa|up_0|NZ_CP007514.1_808857_809349_-	NA	NA|595aa|down_0|NZ_CP007514.1_810226_812011_+	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|436aa|down_1|NZ_CP007514.1_811888_813196_-	NA	NA|218aa|down_2|NZ_CP007514.1_813327_813981_+	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional	NA|183aa|down_3|NZ_CP007514.1_813991_814540_+	TIGR03988, antisig_RsrA, mycothiol system anti-sigma-R factor	NA|358aa|down_4|NZ_CP007514.1_814536_815610_+	pfam04519, Bactofilin, Polymer-forming cytoskeletal	NA|195aa|down_5|NZ_CP007514.1_815606_816191_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|268aa|down_6|NZ_CP007514.1_816203_817007_-	TIGR01247, drrB, daunorubicin resistance ABC transporter membrane protein	NA|318aa|down_7|NZ_CP007514.1_817021_817975_-	TIGR01188, drrA, daunorubicin resistance ABC transporter ATP-binding subunit	NA|261aa|down_8|NZ_CP007514.1_818026_818809_-	NA	NA|208aa|down_9|NZ_CP007514.1_818792_819416_+	COG1846, MarR, Transcriptional regulators [Transcription]
GCF_000661895.1_ASM66189v1	NZ_CP007514	Rubrobacter radiotolerans strain RSPS-4, complete genome	3	1147071-1149653	2,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	DEDDh,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,WYL	Type I-U, Type I-U?,Type I-C	GTTGCGCCCGGCTTTCGAGTCGGGCGAGGATTGGAA,GTTGCGCCCGGCTTTCGAGTCGGGCGAGGATTGGAAA,GTTGCGCCCGGCTTTCGAGTCGGGCGAGGATTGGAAA	36,37,37	0	0	NA	NA	I-C:I-C:I-C	35,35,35	35	TypeI-U,TypeI-U?,TypeI-C	DEDDh,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,csx1,cas6	NA|199aa|up_7|NZ_CP007514.1_1138037_1138634_-,NA|122aa|down_3|NZ_CP007514.1_1154793_1155159_-	NA|287aa|up_9|NZ_CP007514.1_1136219_1137080_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|284aa|up_8|NZ_CP007514.1_1137176_1138028_+	COG0169, AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism]	NA|199aa|up_7|NZ_CP007514.1_1138037_1138634_-	NA	cas3|751aa|up_6|NZ_CP007514.1_1139052_1141305_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas5|235aa|up_5|NZ_CP007514.1_1141332_1142037_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|568aa|up_4|NZ_CP007514.1_1142033_1143737_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|379aa|up_3|NZ_CP007514.1_1143737_1144874_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|203aa|up_2|NZ_CP007514.1_1144910_1145519_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|345aa|up_1|NZ_CP007514.1_1145528_1146563_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NZ_CP007514.1_1146577_1146868_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|515aa|down_0|NZ_CP007514.1_1149736_1151281_-	cd06460, M32_Taq, Peptidase family M32, which includes thermostable carboxypeptidases TaqCP, PfuCP and FisCP	NA|454aa|down_1|NZ_CP007514.1_1151365_1152727_+	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]	NA|662aa|down_2|NZ_CP007514.1_1152735_1154721_-	cd11324, AmyAc_Amylosucrase, Alpha amylase catalytic domain found in Amylosucrase	NA|122aa|down_3|NZ_CP007514.1_1154793_1155159_-	NA	NA|286aa|down_4|NZ_CP007514.1_1155279_1156137_+	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed	NA|445aa|down_5|NZ_CP007514.1_1156195_1157530_+	TIGR00443, hisZ_biosyn_reg, ATP phosphoribosyltransferase, regulatory subunit	NA|223aa|down_6|NZ_CP007514.1_1157526_1158195_+	cd13595, PBP2_HisGs, The catalytic domain of hetero-octomeric short form HisGs; contains the type 2 periplasmic binding protein fold	NA|430aa|down_7|NZ_CP007514.1_1158178_1159468_+	TIGR00069, Histidinol_dehydrogenase, histidinol dehydrogenase	NA|146aa|down_8|NZ_CP007514.1_1159460_1159898_+	PRK10146, PRK10146, aminoalkylphosphonate N-acetyltransferase	NA|195aa|down_9|NZ_CP007514.1_1159942_1160527_+	PRK00951, hisB, imidazoleglycerol-phosphate dehydratase HisB
GCF_000661895.1_ASM66189v1	NZ_CP007515	Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence	1	185076-188632	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	WYL,cas1	cas2,cas4,cas3,cas7,csx1,cas6,csa3,WYL,cas1	Unclear	CTTTCAGTTCCCTATCTAGCGGGAGATGGTCTGCAAC,CTTTCAGTTCCCTATCTAGCGGGAGATGGTCTGCAAC,CTTTCAGTTCCCTATCTAGCGGGAGATGGTCTGCAAC	37,37,37	0	0	NA	NA	NA:NA:NA	48,48,48	48	Unclear	DEDDh,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,csx1,cas6	NA|189aa|up_9|NZ_CP007515.1_173844_174411_+,NA	NA|189aa|up_9|NZ_CP007515.1_173844_174411_+	NA	NA|587aa|up_8|NZ_CP007515.1_174453_176214_+	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|331aa|up_7|NZ_CP007515.1_175991_176984_+	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|253aa|up_6|NZ_CP007515.1_177503_178262_+	pfam01899, MNHE, Na+/H+ ion antiporter subunit	NA|90aa|up_5|NZ_CP007515.1_178258_178528_+	PRK12599, PRK12599, putative monovalent cation/H+ antiporter subunit F; Reviewed	NA|101aa|up_4|NZ_CP007515.1_178524_178827_+	PRK12674, PRK12674, putative monovalent cation/H+ antiporter subunit G; Reviewed	NA|346aa|up_3|NZ_CP007515.1_178826_179864_+	PRK12507, PRK12507, putative monovalent cation/H+ antiporter subunit B; Reviewed	NA|596aa|up_2|NZ_CP007515.1_180099_181887_+	COG0651, HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion / Inorganic ion transport and metabolism]	NA|499aa|up_1|NZ_CP007515.1_181987_183484_+	PRK08375, PRK08375, putative monovalent cation/H+ antiporter subunit D; Reviewed	NA|510aa|up_0|NZ_CP007515.1_183503_185033_+	PRK08375, PRK08375, putative monovalent cation/H+ antiporter subunit D; Reviewed	WYL|299aa|down_0|NZ_CP007515.1_188929_189826_+	pfam13280, WYL, WYL domain	cas1|334aa|down_1|NZ_CP007515.1_189886_190888_+	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
