assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000632805.1_ASM63280v1	NZ_CP007444	Dyella jiangningensis strain SBZ 3-12, complete genome	1	1192527-1192609	1	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	AAAGCGGCCATCCATAGCCGCACT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA,NA	NA|883aa|up_9|NZ_CP007444.1_1180537_1183186_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|667aa|up_8|NZ_CP007444.1_1183245_1185246_-	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	NA|127aa|up_7|NZ_CP007444.1_1185368_1185749_-	pfam04248, NTP_transf_9, Domain of unknown function (DUF427)	NA|160aa|up_6|NZ_CP007444.1_1185824_1186304_-	cd03013, PRX5_like, Peroxiredoxin (PRX) family, PRX5-like subfamily; members are similar to the human protein, PRX5, a homodimeric TRX peroxidase, widely expressed in tissues and found cellularly in mitochondria, peroxisomes and the cytosol	NA|300aa|up_5|NZ_CP007444.1_1186535_1187435_+	PRK10266, PRK10266, curved DNA-binding protein	NA|122aa|up_4|NZ_CP007444.1_1187504_1187870_-	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains	NA|336aa|up_3|NZ_CP007444.1_1187939_1188947_-	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases	NA|199aa|up_2|NZ_CP007444.1_1188972_1189569_-	TIGR00730, LOG_family_protein_YJL055W, TIGR00730 family protein	NA|475aa|up_1|NZ_CP007444.1_1189705_1191130_-	PRK06327, PRK06327, dihydrolipoamide dehydrogenase; Validated	NA|403aa|up_0|NZ_CP007444.1_1191271_1192480_-	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA|949aa|down_0|NZ_CP007444.1_1192622_1195469_-	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed	NA|317aa|down_1|NZ_CP007444.1_1195718_1196669_-	COG2153, ElaA, Predicted acyltransferase [General function prediction only]	NA|398aa|down_2|NZ_CP007444.1_1196665_1197859_-	COG2850, COG2850, Uncharacterized conserved protein [Function unknown]	NA|610aa|down_3|NZ_CP007444.1_1198037_1199867_+	TIGR01931, Sulfite_reductase_flavoprotein_alpha-component, sulfite reductase [NADPH] flavoprotein, alpha-component	NA|565aa|down_4|NZ_CP007444.1_1199868_1201563_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|241aa|down_5|NZ_CP007444.1_1201559_1202282_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|587aa|down_6|NZ_CP007444.1_1202351_1204112_+	PRK05537, PRK05537, bifunctional sulfate adenylyltransferase/adenylylsulfate kinase	NA|339aa|down_7|NZ_CP007444.1_1205153_1206170_-	PRK12680, PRK12680, LysR family transcriptional regulator	NA|473aa|down_8|NZ_CP007444.1_1206495_1207914_+	PRK10637, cysG, siroheme synthase CysG	NA|314aa|down_9|NZ_CP007444.1_1207989_1208931_+	TIGR01139, Cysteine_synthase, cysteine synthase A
GCF_000632805.1_ASM63280v1	NZ_CP007444	Dyella jiangningensis strain SBZ 3-12, complete genome	2	1240115-1240220	2	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	GCGGATGGGCTGCTCGACAACAGC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA|109aa|up_9|NZ_CP007444.1_1218252_1218579_-,NA|619aa|up_4|NZ_CP007444.1_1225179_1227036_-,NA|78aa|down_0|NZ_CP007444.1_1248196_1248430_+,NA|72aa|down_2|NZ_CP007444.1_1251448_1251664_+,NA|215aa|down_3|NZ_CP007444.1_1251809_1252454_+,NA|167aa|down_4|NZ_CP007444.1_1252513_1253014_+,NA|118aa|down_5|NZ_CP007444.1_1253095_1253449_-	NA|109aa|up_9|NZ_CP007444.1_1218252_1218579_-	NA	NA|262aa|up_8|NZ_CP007444.1_1218865_1219651_+	cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR	NA|281aa|up_7|NZ_CP007444.1_1219862_1220705_+	COG2521, COG2521, Predicted archaeal methyltransferase [General function prediction only]	NA|653aa|up_6|NZ_CP007444.1_1220799_1222758_+	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only]	NA|735aa|up_5|NZ_CP007444.1_1222868_1225073_+	PRK10280, PRK10280, peptidyl-dipeptidase Dcp	NA|619aa|up_4|NZ_CP007444.1_1225179_1227036_-	NA	NA|760aa|up_3|NZ_CP007444.1_1227637_1229917_+	pfam07971, Glyco_hydro_92, Glycosyl hydrolase family 92	NA|252aa|up_2|NZ_CP007444.1_1229992_1230748_-	PRK06500, PRK06500, SDR family oxidoreductase	NA|306aa|up_1|NZ_CP007444.1_1230877_1231795_+	cd08472, PBP2_CrgA_like_3, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|593aa|up_0|NZ_CP007444.1_1233332_1235111_+	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|78aa|down_0|NZ_CP007444.1_1248196_1248430_+	NA	NA|862aa|down_1|NZ_CP007444.1_1248623_1251209_+	pfam13332, Fil_haemagg_2, Haemagluttinin repeat	NA|72aa|down_2|NZ_CP007444.1_1251448_1251664_+	NA	NA|215aa|down_3|NZ_CP007444.1_1251809_1252454_+	NA	NA|167aa|down_4|NZ_CP007444.1_1252513_1253014_+	NA	NA|118aa|down_5|NZ_CP007444.1_1253095_1253449_-	NA	NA|161aa|down_6|NZ_CP007444.1_1253743_1254226_+	pfam07166, DUF1398, Protein of unknown function (DUF1398)	NA|143aa|down_7|NZ_CP007444.1_1254210_1254639_+	COG4538, COG4538, Uncharacterized conserved protein [Function unknown]	NA|251aa|down_8|NZ_CP007444.1_1254729_1255482_-	COG5662, COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) [Transcription]	NA|164aa|down_9|NZ_CP007444.1_1255478_1255970_-	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]
GCF_000632805.1_ASM63280v1	NZ_CP007444	Dyella jiangningensis strain SBZ 3-12, complete genome	3	4098736-4098822	3	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	AAGGCTGTCGCGCACAAGGTGCGCTCC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA|86aa|up_2|NZ_CP007444.1_4096211_4096469_-,NA	NA|481aa|up_9|NZ_CP007444.1_4088611_4090054_-	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|533aa|up_8|NZ_CP007444.1_4090193_4091792_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|369aa|up_7|NZ_CP007444.1_4091788_4092895_-	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|169aa|up_6|NZ_CP007444.1_4092930_4093437_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|195aa|up_5|NZ_CP007444.1_4093608_4094193_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|235aa|up_4|NZ_CP007444.1_4094309_4095014_+	PRK08264, PRK08264, SDR family oxidoreductase	NA|340aa|up_3|NZ_CP007444.1_4095173_4096193_+	pfam02685, Glucokinase, Glucokinase	NA|86aa|up_2|NZ_CP007444.1_4096211_4096469_-	NA	NA|228aa|up_1|NZ_CP007444.1_4096737_4097421_+	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|110aa|up_0|NZ_CP007444.1_4097548_4097878_+	PRK10760, PRK10760, murein hydrolase B; Provisional	NA|1009aa|down_0|NZ_CP007444.1_4098913_4101940_-	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]	NA|343aa|down_1|NZ_CP007444.1_4102066_4103095_-	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA|164aa|down_2|NZ_CP007444.1_4103113_4103605_-	pfam02556, SecB, Preprotein translocase subunit SecB	NA|79aa|down_3|NZ_CP007444.1_4103921_4104158_+	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|56aa|down_4|NZ_CP007444.1_4104168_4104336_+	PRK00595, rpmG, 50S ribosomal protein L33; Validated	NA|181aa|down_5|NZ_CP007444.1_4104467_4105010_+	pfam13761, DUF4166, Domain of unknown function (DUF4166)	NA|138aa|down_6|NZ_CP007444.1_4104999_4105413_+	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|371aa|down_7|NZ_CP007444.1_4105402_4106515_-	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]	NA|398aa|down_8|NZ_CP007444.1_4106640_4107834_-	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism]	NA|252aa|down_9|NZ_CP007444.1_4108012_4108768_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]
