assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000632415.1_ASM63241v1	NZ_CP004887	Klebsiella michiganensis HKOPL1 chromosome, complete genome	1	774320-774410	1	CRISPRCasFinder	no		WYL,DEDDh,cas3,cas14j,csa3,DinG,cas6f,cas7f,cas5f,cas8f	Orphan	TCCGGGCTACCCGAACGCAGGCGG	24	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,cas3,cas14j,csa3,DinG,cas6f,cas7f,cas5f,cas8f	NA,NA	NA|86aa|up_9|NZ_CP004887.1_762100_762358_+	PRK09956, PRK09956, ISNCY family transposase	NA|301aa|up_8|NZ_CP004887.1_762361_763264_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|103aa|up_7|NZ_CP004887.1_763414_763723_-	pfam01845, CcdB, CcdB protein	NA|79aa|up_6|NZ_CP004887.1_763725_763962_-	pfam07362, CcdA, Post-segregation antitoxin CcdA	NA|478aa|up_5|NZ_CP004887.1_764067_765501_-	PRK09586, murP, PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed	NA|301aa|up_4|NZ_CP004887.1_765525_766428_-	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed	NA|389aa|up_3|NZ_CP004887.1_766588_767755_-	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|455aa|up_2|NZ_CP004887.1_767805_769170_-	PRK09837, PRK09837, Cu(I)/Ag(I) efflux RND transporter outer membrane protein	NA|375aa|up_1|NZ_CP004887.1_772280_773405_-	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA	NA|139aa|up_0|NZ_CP004887.1_773858_774275_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|499aa|down_0|NZ_CP004887.1_775220_776717_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|305aa|down_1|NZ_CP004887.1_776713_777628_-	cd08471, PBP2_CrgA_like_2, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|207aa|down_2|NZ_CP004887.1_777730_778351_+	COG3576, COG3576, Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase [General function prediction only]	NA|157aa|down_3|NZ_CP004887.1_778481_778952_+	pfam07080, DUF1348, Protein of unknown function (DUF1348)	NA|270aa|down_4|NZ_CP004887.1_779207_780017_+	PRK09861, PRK09861, lipoprotein NlpA	NA|287aa|down_5|NZ_CP004887.1_780041_780902_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|185aa|down_6|NZ_CP004887.1_780893_781448_-	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|260aa|down_7|NZ_CP004887.1_781617_782397_+	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]	NA|350aa|down_8|NZ_CP004887.1_783362_784412_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|101aa|down_9|NZ_CP004887.1_784570_784873_-	COG1359, COG1359, Uncharacterized conserved protein [Function unknown]
GCF_000632415.1_ASM63241v1	NZ_CP004887	Klebsiella michiganensis HKOPL1 chromosome, complete genome	2	1829126-1830742	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no		WYL,DEDDh,cas3,cas14j,csa3,DinG,cas6f,cas7f,cas5f,cas8f	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	1	1	1829766-1829797	NZ_CP004887.1_2179588-2179619	I-E:I-E:I-E	25,26,23	26	Orphan	WYL,DEDDh,cas3,cas14j,csa3,DinG,cas6f,cas7f,cas5f,cas8f	NA,NA|50aa|down_0|NZ_CP004887.1_1830850_1831000_-	NA|746aa|up_9|NZ_CP004887.1_1813659_1815897_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|264aa|up_8|NZ_CP004887.1_1815965_1816757_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_7|NZ_CP004887.1_1816984_1818622_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_6|NZ_CP004887.1_1818702_1820001_+	PRK00077, eno, enolase; Provisional	NA|370aa|up_5|NZ_CP004887.1_1820067_1821177_-	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs	NA|224aa|up_4|NZ_CP004887.1_1821637_1822309_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|121aa|up_3|NZ_CP004887.1_1822366_1822729_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|up_2|NZ_CP004887.1_1823159_1824959_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|up_1|NZ_CP004887.1_1824958_1826671_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_0|NZ_CP004887.1_1826769_1827504_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|50aa|down_0|NZ_CP004887.1_1830850_1831000_-	NA	NA|352aa|down_1|NZ_CP004887.1_1831035_1832091_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|469aa|down_2|NZ_CP004887.1_1832337_1833744_+	PRK10637, cysG, siroheme synthase CysG	NA|303aa|down_3|NZ_CP004887.1_1833753_1834662_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_4|NZ_CP004887.1_1834671_1836099_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_5|NZ_CP004887.1_1836098_1836704_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|109aa|down_6|NZ_CP004887.1_1836757_1837084_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|106aa|down_7|NZ_CP004887.1_1837224_1837542_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_8|NZ_CP004887.1_1837561_1838272_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_9|NZ_CP004887.1_1838271_1838751_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed
GCF_000632415.1_ASM63241v1	NZ_CP004887	Klebsiella michiganensis HKOPL1 chromosome, complete genome	3	1919671-1919820	3	CRISPRCasFinder	no		WYL,DEDDh,cas3,cas14j,csa3,DinG,cas6f,cas7f,cas5f,cas8f	Orphan	CCCGGGTCGCGGCCGTAAACGCCTTACCCGGGCTACCGGTCCGCGGG	47	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,cas3,cas14j,csa3,DinG,cas6f,cas7f,cas5f,cas8f	NA,NA	NA|115aa|up_9|NZ_CP004887.1_1911247_1911592_-	PRK03681, hypA, hydrogenase/urease nickel incorporation protein HypA	NA|150aa|up_8|NZ_CP004887.1_1911800_1912250_+	PRK10198, PRK10198, formate hydrogenlyase regulator HycA	NA|203aa|up_7|NZ_CP004887.1_1912332_1912941_+	cd10554, HycB_like, HycB, HydN and similar proteins	NA|609aa|up_6|NZ_CP004887.1_1912937_1914764_+	PRK08042, PRK08042, formate hydrogenlyase subunit 3; Reviewed	NA|308aa|up_5|NZ_CP004887.1_1914766_1915690_+	COG0650, HyfC, Formate hydrogenlyase subunit 4 [Energy production and conversion]	NA|570aa|up_4|NZ_CP004887.1_1915707_1917417_+	COG3261, HycE, Ni,Fe-hydrogenase III large subunit [Energy production and conversion]	NA|181aa|up_3|NZ_CP004887.1_1917426_1917969_+	PRK12387, PRK12387, formate hydrogenlyase complex iron-sulfur subunit; Provisional	NA|256aa|up_2|NZ_CP004887.1_1917968_1918736_+	COG3260, COG3260, Ni,Fe-hydrogenase III small subunit [Energy production and conversion]	NA|137aa|up_1|NZ_CP004887.1_1918732_1919143_+	PRK15084, PRK15084, formate hydrogenlyase maturation protein HycH; Provisional	NA|162aa|up_0|NZ_CP004887.1_1919135_1919621_+	PRK11544, hycI, hydrogenase 3 maturation protease; Provisional	NA|475aa|down_0|NZ_CP004887.1_1919922_1921347_-	PRK09852, PRK09852, cryptic 6-phospho-beta-glucosidase; Provisional	NA|481aa|down_1|NZ_CP004887.1_1921373_1922816_-	PRK09796, PRK09796, PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional	NA|338aa|down_2|NZ_CP004887.1_1923072_1924086_+	cd06270, PBP1_GalS-like, ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism	NA|740aa|down_3|NZ_CP004887.1_1924761_1926981_+	COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]	NA|338aa|down_4|NZ_CP004887.1_1926992_1928006_+	COG3376, HoxN, High-affinity nickel permease [Inorganic ion transport and metabolism]	NA|378aa|down_5|NZ_CP004887.1_1928238_1929372_-	PRK04965, PRK04965, NADH:flavorubredoxin reductase NorW	NA|482aa|down_6|NZ_CP004887.1_1929368_1930814_-	PRK05452, PRK05452, anaerobic nitric oxide reductase flavorubredoxin; Provisional	NA|515aa|down_7|NZ_CP004887.1_1931001_1932546_+	PRK05022, PRK05022, nitric oxide reductase transcriptional regulator NorR	NA|322aa|down_8|NZ_CP004887.1_1932508_1933474_-	PRK11543, gutQ, arabinose-5-phosphate isomerase GutQ	NA|258aa|down_9|NZ_CP004887.1_1933466_1934240_-	PRK10434, srlR, DNA-binding transcriptional repressor
GCF_000632415.1_ASM63241v1	NZ_CP004887	Klebsiella michiganensis HKOPL1 chromosome, complete genome	4	4557589-4557671	4	CRISPRCasFinder	no	cas6f,cas7f,cas5f,cas8f	WYL,DEDDh,cas3,cas14j,csa3,DinG,cas6f,cas7f,cas5f,cas8f	Type I-F	TAAGCTGCCTGTACGGCAGTGAA	23	0	0	NA	NA	I-F	1	1	TypeI-F	WYL,DEDDh,cas3,cas14j,csa3,DinG,cas6f,cas7f,cas5f,cas8f	NA|37aa|up_5|NZ_CP004887.1_4551352_4551463_-,NA	NA|431aa|up_9|NZ_CP004887.1_4543033_4544326_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|448aa|up_8|NZ_CP004887.1_4544417_4545761_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|204aa|up_7|NZ_CP004887.1_4545769_4546381_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|165aa|up_6|NZ_CP004887.1_4550574_4551069_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|37aa|up_5|NZ_CP004887.1_4551352_4551463_-	NA	NA|323aa|up_4|NZ_CP004887.1_4551600_4552569_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|NZ_CP004887.1_4552683_4554450_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|NZ_CP004887.1_4554450_4556172_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|NZ_CP004887.1_4556210_4556915_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|NZ_CP004887.1_4557194_4557413_+	PRK00276, infA, translation initiation factor IF-1; Validated	cas6f|185aa|down_0|NZ_CP004887.1_4557885_4558440_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|334aa|down_1|NZ_CP004887.1_4558449_4559451_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|312aa|down_2|NZ_CP004887.1_4559461_4560397_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|438aa|down_3|NZ_CP004887.1_4560393_4561707_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	NA|761aa|down_4|NZ_CP004887.1_4563260_4565543_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|106aa|down_5|NZ_CP004887.1_4565573_4565891_-	COG2127, COG2127, Uncharacterized conserved protein [Function unknown]	NA|77aa|down_6|NZ_CP004887.1_4566215_4566446_+	PRK14998, PRK14998, cold shock-like protein CspD; Provisional	NA|649aa|down_7|NZ_CP004887.1_4566514_4568461_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_8|NZ_CP004887.1_4568457_4569573_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|553aa|down_9|NZ_CP004887.1_4569748_4571407_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]
GCF_000632415.1_ASM63241v1	NZ_CP004887	Klebsiella michiganensis HKOPL1 chromosome, complete genome	5	4635032-4635168	5	CRISPRCasFinder	no		WYL,DEDDh,cas3,cas14j,csa3,DinG,cas6f,cas7f,cas5f,cas8f	Orphan	ATTCGGCTTGAGAGCCGTTTCCA	23	0	0	NA	NA	NA	2	2	Orphan	WYL,DEDDh,cas3,cas14j,csa3,DinG,cas6f,cas7f,cas5f,cas8f	NA|47aa|up_8|NZ_CP004887.1_4628162_4628303_-,NA|61aa|up_6|NZ_CP004887.1_4629696_4629879_-,NA|98aa|up_4|NZ_CP004887.1_4630659_4630953_-,NA|71aa|up_1|NZ_CP004887.1_4633998_4634211_-,NA|98aa|up_0|NZ_CP004887.1_4634207_4634501_-,NA|90aa|down_2|NZ_CP004887.1_4637163_4637433_+,NA|63aa|down_3|NZ_CP004887.1_4637700_4637889_+,NA|102aa|down_5|NZ_CP004887.1_4638488_4638794_+,NA|98aa|down_6|NZ_CP004887.1_4638790_4639084_+	NA|274aa|up_9|NZ_CP004887.1_4627344_4628166_-	pfam03589, Antiterm, Antitermination protein	NA|47aa|up_8|NZ_CP004887.1_4628162_4628303_-	NA	NA|214aa|up_7|NZ_CP004887.1_4628299_4628941_-	COG4725, IME4, Transcriptional activator, adenine-specific DNA methyltransferase [Signal transduction mechanisms / Transcription]	NA|61aa|up_6|NZ_CP004887.1_4629696_4629879_-	NA	NA|78aa|up_5|NZ_CP004887.1_4630005_4630239_-	PRK10597, PRK10597, DNA damage-inducible protein I; Provisional	NA|98aa|up_4|NZ_CP004887.1_4630659_4630953_-	NA	NA|245aa|up_3|NZ_CP004887.1_4631927_4632662_-	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair]	NA|262aa|up_2|NZ_CP004887.1_4633220_4634006_-	TIGR03734, PRTRC_parB, PRTRC system ParB family protein	NA|71aa|up_1|NZ_CP004887.1_4633998_4634211_-	NA	NA|98aa|up_0|NZ_CP004887.1_4634207_4634501_-	NA	NA|142aa|down_0|NZ_CP004887.1_4635854_4636280_-	pfam06254, YdaT_toxin, Putative bacterial toxin ydaT	NA|136aa|down_1|NZ_CP004887.1_4636573_4636981_+	PRK09706, PRK09706, transcriptional repressor DicA; Reviewed	NA|90aa|down_2|NZ_CP004887.1_4637163_4637433_+	NA	NA|63aa|down_3|NZ_CP004887.1_4637700_4637889_+	NA	NA|98aa|down_4|NZ_CP004887.1_4637881_4638175_+	pfam06301, Lambda_Kil, Bacteriophage lambda Kil protein	NA|102aa|down_5|NZ_CP004887.1_4638488_4638794_+	NA	NA|98aa|down_6|NZ_CP004887.1_4638790_4639084_+	NA	NA|235aa|down_7|NZ_CP004887.1_4639210_4639915_+	TIGR01651, CobT, cobaltochelatase, CobT subunit	NA|72aa|down_8|NZ_CP004887.1_4640007_4640223_+	pfam06806, DUF1233, Putative excisionase (DUF1233)	NA|429aa|down_9|NZ_CP004887.1_4640222_4641509_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons
GCF_000632415.1_ASM63241v1	NZ_CP004887	Klebsiella michiganensis HKOPL1 chromosome, complete genome	6	4931621-4931730	6	CRISPRCasFinder	no		WYL,DEDDh,cas3,cas14j,csa3,DinG,cas6f,cas7f,cas5f,cas8f	Orphan	ACCCGTAGCCCGGGTAAGCGCAGCGC	26	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,cas3,cas14j,csa3,DinG,cas6f,cas7f,cas5f,cas8f	NA,NA	NA|400aa|up_9|NZ_CP004887.1_4920285_4921485_+	PRK09550, mtnK, methylthioribose kinase; Reviewed	NA|414aa|up_8|NZ_CP004887.1_4921829_4923071_-	COG5276, COG5276, Uncharacterized conserved protein [Function unknown]	NA|355aa|up_7|NZ_CP004887.1_4923067_4924132_-	cd06305, PBP1_methylthioribose_binding-like, similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily	NA|333aa|up_6|NZ_CP004887.1_4924276_4925275_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|501aa|up_5|NZ_CP004887.1_4925271_4926774_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|363aa|up_4|NZ_CP004887.1_4926934_4928023_+	PRK10586, PRK10586, putative oxidoreductase; Provisional	NA|98aa|up_3|NZ_CP004887.1_4928209_4928503_+	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|135aa|up_2|NZ_CP004887.1_4928483_4928888_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|66aa|up_1|NZ_CP004887.1_4928884_4929082_-	COG2879, COG2879, Uncharacterized small protein [Function unknown]	NA|702aa|up_0|NZ_CP004887.1_4929137_4931243_-	PRK15015, PRK15015, carbon starvation protein CstA	NA|138aa|down_0|NZ_CP004887.1_4931751_4932165_-	PRK10254, PRK10254, proofreading thioesterase EntH	NA|252aa|down_1|NZ_CP004887.1_4932165_4932921_-	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	NA|284aa|down_2|NZ_CP004887.1_4932920_4933772_-	COG1535, EntB, Isochorismate hydrolase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|536aa|down_3|NZ_CP004887.1_4933785_4935393_-	PRK10946, entE, (2,3-dihydroxybenzoyl)adenylate synthase	NA|392aa|down_4|NZ_CP004887.1_4935402_4936578_-	PRK15016, PRK15016, isochorismate synthase EntC; Provisional	NA|320aa|down_5|NZ_CP004887.1_4936765_4937725_+	PRK10957, PRK10957, iron-enterobactin transporter periplasmic binding protein; Provisional	NA|706aa|down_6|NZ_CP004887.1_4937954_4940072_+	COG3325, ChiA, Chitinase [Carbohydrate transport and metabolism]	NA|414aa|down_7|NZ_CP004887.1_4940573_4941815_-	PRK10489, PRK10489, enterobactin transporter EntS	NA|336aa|down_8|NZ_CP004887.1_4941927_4942935_+	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease	NA|331aa|down_9|NZ_CP004887.1_4942931_4943924_+	PRK10440, PRK10440, iron-enterobactin ABC transporter permease
