The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP007175	Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110354 chromosome, complete genome	4711160	930960	938273	4711160	protease,integrase	Dickeya_phage(16.67%)	7	919698:919712	938491:938505
919698:919712	attL	AGCCTGCGAGGAGAC	NA	NA	NA	NA
WP_001201751.1|930960_932079_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.4e-08
WP_000125875.1|932075_934022_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	43.1	2.0e-39
WP_000447499.1|934151_934373_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
WP_000520789.1|934696_935017_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
WP_000934059.1|935047_937324_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.3	1.4e-164
WP_001117984.1|937536_937734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001539594.1|937895_938273_-|integrase	integrase	integrase	A0A077KET4	Ralstonia_phage	41.0	1.2e-20
938491:938505	attR	GTCTCCTCGCAGGCT	NA	NA	NA	NA
>prophage 2
NZ_CP007175	Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110354 chromosome, complete genome	4711160	988693	1050211	4711160	tail,protease,tRNA	Salmonella_phage(23.53%)	54	NA	NA
WP_001154025.1|988693_989497_+|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	tRNA	NA	NA	NA	NA
WP_001288828.1|989489_990812_+	chromosome partition protein MukF	NA	NA	NA	NA	NA
WP_000060025.1|990792_991497_+	chromosome partition protein MukE	NA	NA	NA	NA	NA
WP_000572746.1|991496_995963_+	chromosome partition protein MukB	NA	NA	NA	NA	NA
WP_000925870.1|996307_998158_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_000357052.1|998417_998966_+	YcbK family protein	NA	A0A0K1LKR7	Rhodobacter_phage	33.7	1.2e-05
WP_001109471.1|998993_999641_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_000462653.1|999702_1000893_-	aspartate transaminase	NA	NA	NA	NA	NA
WP_000977709.1|1001077_1002169_-	porin OmpF	NA	Q1MVN1	Enterobacteria_phage	51.7	1.7e-99
WP_000117867.1|1002762_1004163_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2K9V902	Bandra_megavirus	35.8	4.5e-81
WP_000762342.1|1004363_1004825_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_000544855.1|1005142_1006357_+	diaminopropionate ammonia-lyase	NA	NA	NA	NA	NA
WP_000893200.1|1006602_1008039_+	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_000191404.1|1008116_1009319_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_001676370.1|1009513_1009924_-	enterohemolysin	NA	H6WRX0	Salmonella_phage	100.0	5.0e-33
WP_000274547.1|1009944_1010574_+	hypothetical protein	NA	A0A0U2RJZ0	Escherichia_phage	65.9	1.6e-75
WP_000729406.1|1010557_1011184_+	hypothetical protein	NA	A0A0U2RK03	Escherichia_phage	71.6	3.3e-92
WP_000583382.1|1011180_1012890_+|tail	tail fiber protein	tail	A0A0U2SAV1	Escherichia_phage	66.0	1.5e-91
WP_000143167.1|1012889_1013471_+|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	89.5	1.7e-95
WP_072100753.1|1013474_1013723_-|tail	phage tail protein	tail	A0A1B0VCD0	Salmonella_phage	66.2	2.1e-18
WP_001674638.1|1013948_1014917_+	SPI-2 type III secretion system effector SseI	NA	Q9MBL9	Phage_Gifsy-2	99.4	3.0e-193
WP_000334547.1|1015564_1016191_-	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	63.2	1.4e-66
WP_001525490.1|1016550_1017237_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000497441.1|1017507_1017699_-	DinI-like family protein	NA	S4TNM0	Salmonella_phage	95.2	6.2e-26
WP_000193790.1|1018125_1020738_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.8	6.3e-20
WP_000291723.1|1020945_1021956_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_001574119.1|1022121_1022664_+	cell division protein ZapC	NA	NA	NA	NA	NA
WP_000224079.1|1022660_1023770_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_001086485.1|1023868_1025977_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA	NA
WP_000053044.1|1025989_1027897_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.4e-53
WP_000333139.1|1027911_1029165_+	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA	NA
WP_000433414.1|1029169_1030810_+	intermembrane transport protein PqiB	NA	NA	NA	NA	NA
WP_000759136.1|1030806_1031370_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_001537784.1|1031625_1031793_+	ribosome modulation factor	NA	NA	NA	NA	NA
WP_000227928.1|1031892_1032411_-	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA	NA
WP_000156448.1|1032479_1034240_-|protease	Lon protease family protein	protease	NA	NA	NA	NA
WP_000877172.1|1034425_1034878_+	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
WP_001674965.1|1034949_1036002_-	porin OmpA	NA	NA	NA	NA	NA
WP_000288733.1|1036358_1036868_-	cell division inhibitor SulA	NA	NA	NA	NA	NA
WP_001202375.1|1037084_1037690_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA	NA
WP_000950876.1|1037676_1039830_-	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
WP_001261222.1|1039848_1040295_-	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_000420505.1|1040418_1042473_+	DNA helicase IV	NA	A7KV33	Bacillus_phage	27.6	8.5e-20
WP_000424187.1|1042508_1042967_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_000847719.1|1043061_1043724_-	DUF2057 family protein	NA	NA	NA	NA	NA
WP_001676378.1|1043897_1044311_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_000561983.1|1044355_1044673_-	heat shock protein HspQ	NA	NA	NA	NA	NA
WP_000140478.1|1044730_1045942_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA	NA
WP_000859416.1|1046156_1046705_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_000548080.1|1046730_1047510_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_000072884.1|1047558_1047840_+	acylphosphatase	NA	NA	NA	NA	NA
WP_000904449.1|1047836_1048166_-	sulfurtransferase TusE	NA	NA	NA	NA	NA
WP_000374046.1|1048252_1048912_-|protease	FtsH protease modulator YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	52.4	2.7e-44
WP_000938186.1|1049530_1050211_-|protease	type III secretion system effector protease PipA	protease	Q9MBM0	Phage_Gifsy-2	71.0	2.2e-81
>prophage 3
NZ_CP007175	Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110354 chromosome, complete genome	4711160	1190407	1248458	4711160	tail,holin,integrase,lysis,tRNA	Salmonella_phage(21.43%)	60	1233007:1233024	1245151:1245168
WP_000569035.1|1190407_1191379_-|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	tRNA	NA	NA	NA	NA
WP_000019607.1|1191375_1192119_-	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	F5B419	Synechococcus_phage	30.9	4.1e-25
WP_000252975.1|1192159_1192555_-	membrane protein	NA	NA	NA	NA	NA
WP_000639226.1|1192607_1193426_-	DUF72 domain-containing protein	NA	Q859D1	Escherichia_coli_phage	80.3	4.5e-57
WP_000916144.1|1193422_1193989_-	hydrolase	NA	NA	NA	NA	NA
WP_001258629.1|1194313_1196086_+|tRNA	aspartate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000653693.1|1196188_1196641_+	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA	NA
WP_000907242.1|1196670_1197411_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_000022509.1|1197447_1197969_+	crossover junction endodeoxyribonuclease RuvC	NA	G3MA90	Bacillus_virus	35.1	2.6e-10
WP_000716756.1|1197970_1198570_-	YebB family permuted papain-like enzyme	NA	NA	NA	NA	NA
WP_001676480.1|1198778_1199471_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000580335.1|1199830_1200442_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_000568508.1|1200450_1201461_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	26.4	2.4e-07
WP_000571521.1|1201539_1202325_-	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA	NA
WP_000203023.1|1202321_1203077_-	zinc ABC transporter ATP-binding protein ZnuC	NA	G3M9Y6	Bacillus_virus	29.4	8.5e-18
WP_000939597.1|1203155_1204100_+	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA	NA
WP_001184028.1|1204115_1205435_+	murein DD-endopeptidase MepM	NA	A8ATH6	Listeria_phage	40.9	2.6e-14
WP_000448401.1|1205551_1206523_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA	NA
WP_000091156.1|1206595_1208038_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_001056720.1|1208161_1209031_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000301711.1|1209372_1210848_+	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	37.5	2.6e-79
WP_001069113.1|1211082_1212894_+	phosphogluconate dehydratase	NA	NA	NA	NA	NA
WP_000800494.1|1212931_1213573_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA	NA
WP_000173418.1|1213672_1214851_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_000257723.1|1214981_1215272_+	DNA damage-inducible protein YebG	NA	NA	NA	NA	NA
WP_001042123.1|1215339_1215693_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000024715.1|1215786_1216446_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_000936990.1|1216658_1218710_+	oligopeptidase B	NA	NA	NA	NA	NA
WP_000944288.1|1218746_1219445_-	exodeoxyribonuclease X	NA	Q6UAU3	Klebsiella_phage	40.4	2.8e-07
WP_000100257.1|1219468_1220125_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA	NA
WP_000856224.1|1220232_1220463_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	60.3	2.9e-14
WP_000168393.1|1220600_1220975_+	CopC domain-containing protein YobA	NA	NA	NA	NA	NA
WP_000979694.1|1220975_1221851_+	copper homeostasis membrane protein CopD	NA	NA	NA	NA	NA
WP_000722370.1|1221867_1222221_+	YebY family protein	NA	NA	NA	NA	NA
WP_000087636.1|1222603_1223683_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	52.5	3.0e-101
WP_001575998.1|1223657_1223936_-	excisionase	NA	A0A2H4J5E1	uncultured_Caudovirales_phage	37.5	1.4e-10
WP_001237395.1|1224349_1226329_+	MBL fold metallo-hydrolase	NA	A0A2P0VMX1	Tetraselmis_virus	46.3	1.9e-162
WP_000972675.1|1226960_1227266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000940753.1|1227329_1227929_+	DUF1367 family protein	NA	A0A0U2RT94	Escherichia_phage	82.9	4.7e-96
WP_000784710.1|1227925_1228153_+	DNA breaking-rejoining protein	NA	A0A0M4RU10	Salmonella_phage	66.7	2.2e-14
WP_001097218.1|1228282_1228972_+	antitermination protein	NA	I6PDF8	Cronobacter_phage	54.9	2.1e-60
WP_001574213.1|1229068_1229593_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000798708.1|1229966_1230416_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001574215.1|1230776_1231463_-	PipA/GogA/GtgA family type III secretion system effector	NA	Q9MBM0	Phage_Gifsy-2	99.6	1.8e-131
WP_001574216.1|1231738_1232068_+|holin	phage holin, lambda family	holin	A0A0M3ULK9	Salmonella_phage	100.0	5.8e-56
WP_000984586.1|1232051_1232504_+	lysozyme	NA	A0A0M4R365	Salmonella_phage	97.3	2.3e-79
WP_001541990.1|1232521_1233001_+|lysis	lysis protein	lysis	Q56118	Enterobacteria_phage	77.0	1.4e-55
1233007:1233024	attL	TTAAAAAGGTACTCCCGG	NA	NA	NA	NA
WP_000877926.1|1233895_1234429_-	superoxide dismutase [Cu-Zn]	NA	Q9MC02	Salmonella_phage	54.0	1.8e-46
WP_001152416.1|1234518_1235214_+|tail	phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	66.7	1.0e-89
WP_072100756.1|1237854_1238718_+	DUF1983 domain-containing protein	NA	K7PKJ2	Enterobacteria_phage	78.9	9.0e-48
WP_000161704.1|1239268_1239991_-	SPI-1 type III secretion system guanine nucleotide exchange factor SopE	NA	NA	NA	NA	NA
WP_001536069.1|1240470_1241271_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000622159.1|1242215_1242485_-|integrase	tyrosine-type recombinase/integrase	integrase	K7PHK0	Enterobacteria_phage	47.8	2.7e-11
WP_077681935.1|1243128_1243623_-	RecE	NA	A0A0U2I1R6	Escherichia_phage	70.3	3.7e-22
WP_001013467.1|1243812_1244043_+	hypothetical protein	NA	Q8HA86	Salmonella_phage	93.7	6.1e-28
WP_001050883.1|1244096_1244630_+	DUF2514 domain-containing protein	NA	A0A291LBG9	Klebsiella_phage	43.0	5.4e-11
WP_000789530.1|1244886_1245054_-	lytic enzyme	NA	NA	NA	NA	NA
WP_001576014.1|1245118_1245307_-	hypothetical protein	NA	NA	NA	NA	NA
1245151:1245168	attR	TTAAAAAGGTACTCCCGG	NA	NA	NA	NA
WP_000348542.1|1245361_1245853_+	DUF1441 family protein	NA	Q9EYD0	Enterobacteria_phage	56.2	1.6e-41
WP_001687735.1|1247957_1248458_+|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	77.4	1.5e-63
>prophage 4
NZ_CP007175	Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110354 chromosome, complete genome	4711160	1462691	1478635	4711160	holin,tRNA	Escherichia_phage(62.5%)	21	NA	NA
WP_000123686.1|1462691_1464065_+	ATP-dependent RNA helicase DbpA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.0	2.1e-51
WP_001156217.1|1464108_1465044_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	97.3	7.2e-144
WP_001676915.1|1465360_1465978_-	exodeoxyribonuclease	NA	A0A088CD28	Shigella_phage	41.9	2.5e-36
WP_000800272.1|1466005_1466323_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000560208.1|1466407_1466629_-	cell division protein FtsZ	NA	A0A0U2RTC4	Escherichia_phage	83.6	7.9e-33
WP_000004762.1|1467066_1467588_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085981757.1|1467695_1467851_-	DUF1391 family protein	NA	M4QQ57	Salicola_phage	48.9	2.6e-06
WP_001227859.1|1468235_1468703_-	helix-turn-helix domain-containing protein	NA	A0A0U2QW76	Escherichia_phage	66.9	1.0e-53
WP_001676916.1|1468975_1469305_+	DUF977 family protein	NA	A0A0U2QQN3	Escherichia_phage	51.7	6.5e-23
WP_001033796.1|1469466_1470021_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000556389.1|1470017_1470950_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000882662.1|1471319_1471532_+	type I toxin-antitoxin system Hok family toxin	NA	A0A0U2QV81	Escherichia_phage	95.7	2.5e-28
WP_000940751.1|1472055_1472655_+	DUF1367 family protein	NA	A0A0U2RT94	Escherichia_phage	82.9	5.5e-97
WP_000774470.1|1472654_1472945_+	DUF1364 domain-containing protein	NA	A0A0U2KD41	Escherichia_phage	76.0	5.1e-40
WP_000640113.1|1472941_1473478_+	DUF1133 family protein	NA	A0A0U2S606	Escherichia_phage	70.9	1.4e-70
WP_000900605.1|1475648_1476044_+	tellurite resistance TerB family protein	NA	Q71TK7	Escherichia_phage	88.9	4.7e-44
WP_001688615.1|1475965_1476154_+	hypothetical protein	NA	Q8W636	Enterobacteria_phage	57.4	9.4e-11
WP_000445513.1|1476143_1476425_+|holin	phage holin family protein	holin	K7PKN9	Enterobacterial_phage	49.4	1.3e-16
WP_000802786.1|1476421_1476967_+	glycoside hydrolase family 108 protein	NA	A0A0U2S643	Escherichia_phage	83.4	2.3e-89
WP_000159240.1|1477812_1478151_+	EamA family transporter	NA	NA	NA	NA	NA
WP_001082296.1|1478200_1478635_-	universal stress protein UspF	NA	A0A1W6JNV4	Morganella_phage	52.1	9.4e-30
>prophage 5
NZ_CP007175	Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110354 chromosome, complete genome	4711160	2130645	2141152	4711160		Enterobacteria_phage(37.5%)	10	NA	NA
WP_000126349.1|2130645_2131959_-	lipopolysaccharide biosynthesis protein RfbH	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	7.0e-52
WP_000565913.1|2131985_2133065_-	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.5	1.7e-16
WP_000648783.1|2133069_2133843_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000018223.1|2133858_2134833_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_000973709.1|2134838_2135390_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.0	1.3e-52
WP_000857535.1|2135390_2136269_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	65.5	2.1e-108
WP_001023658.1|2136316_2137216_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.0	5.1e-30
WP_000697848.1|2137215_2138301_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.6e-102
WP_000981469.1|2138677_2139571_-	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
WP_001144948.1|2139748_2141152_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	4.0e-21
>prophage 6
NZ_CP007175	Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110354 chromosome, complete genome	4711160	2208349	2217520	4711160	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
WP_000195340.1|2208349_2210383_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	26.9	6.1e-55
WP_000703145.1|2210623_2211082_+	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	6.4e-53
WP_001197951.1|2211253_2211784_+	YehR family lipoprotein	NA	NA	NA	NA	NA
WP_000950414.1|2211840_2212308_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	89.7	4.3e-73
WP_000598637.1|2212354_2213074_-	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_000272845.1|2213070_2214756_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.1	6.2e-279
WP_001240421.1|2214978_2215710_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.4	1.7e-100
WP_001261696.1|2215769_2215877_+	protein YohO	NA	NA	NA	NA	NA
WP_000824854.1|2215857_2216589_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569168.1|2216572_2217520_-	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	2.8e-10
>prophage 7
NZ_CP007175	Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110354 chromosome, complete genome	4711160	2453954	2460014	4711160		Salmonella_virus(50.0%)	6	NA	NA
WP_000377779.1|2453954_2454896_+	membrane protein	NA	E7DYY8	Enterobacteria_phage	87.8	1.6e-146
WP_001576268.1|2456138_2456528_+	GtrA family protein	NA	A0A192Y6N5	Salmonella_phage	85.6	1.1e-50
WP_000703599.1|2456496_2456751_+	glycosyltransferase	NA	A8CG95	Salmonella_phage	79.5	3.1e-25
WP_000400616.1|2456768_2458691_+	acyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	77.3	5.6e-300
WP_105789228.1|2459680_2459824_-	hypothetical protein	NA	A0A1R3Y5S2	Salmonella_virus	82.9	1.7e-12
WP_108630384.1|2459762_2460014_-	hypothetical protein	NA	A0A1R3Y5S2	Salmonella_virus	68.6	7.6e-08
>prophage 8
NZ_CP007175	Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110354 chromosome, complete genome	4711160	2689094	2789043	4711160	plate,terminase,portal,tail,transposase,integrase,lysis,capsid,head,tRNA	Salmonella_phage(76.36%)	91	2707467:2707481	2787948:2787962
WP_000083345.1|2689094_2689832_-|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	tRNA	NA	NA	NA	NA
WP_000219174.1|2689961_2691296_+	ATP-dependent RNA helicase SrmB	NA	A0A1B1IS59	uncultured_Mediterranean_phage	29.7	1.6e-43
WP_001675040.1|2691313_2692213_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000188410.1|2692315_2692903_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA	NA
WP_000627811.1|2692964_2693348_-	autonomous glycyl radical cofactor GrcA	NA	Q7Y524	Enterobacteria_phage	74.0	6.1e-33
WP_000179978.1|2693666_2694356_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	49.5	4.6e-55
WP_000997368.1|2694471_2695509_-|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
WP_001098733.1|2695712_2696132_+	thioredoxin TrxC	NA	A0A1J0GW78	Streptomyces_phage	39.0	5.9e-13
WP_000183642.1|2696204_2696885_+	DTW domain-containing protein	NA	NA	NA	NA	NA
WP_000082648.1|2696938_2699599_+	protein lysine acetyltransferase	NA	NA	NA	NA	NA
WP_000949286.1|2699713_2701069_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_001264473.1|2701113_2701437_+	YfiM family lipoprotein	NA	NA	NA	NA	NA
WP_000807815.1|2701433_2702735_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	30.6	1.8e-44
WP_000985655.1|2702838_2703294_-	DUF4385 domain-containing protein	NA	E3SMI8	Prochlorococcus_phage	49.3	3.9e-34
2707467:2707481	attL	TTTGAGTTCCCGGCC	NA	NA	NA	NA
WP_001235093.1|2709073_2711647_-	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	35.5	2.0e-127
WP_000992636.1|2711776_2712508_-	polyphenol oxidase	NA	NA	NA	NA	NA
WP_000079130.1|2712504_2713485_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA	NA
WP_000197660.1|2713616_2714354_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_000178449.1|2714625_2714964_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_010989056.1|2715067_2715115_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000200077.1|2715214_2716375_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA	NA
WP_000210984.1|2716335_2717244_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_000225188.1|2717301_2718423_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_001168062.1|2718432_2719503_-	3-deoxy-7-phosphoheptulonate synthase AroF	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.8	2.4e-90
WP_001212379.1|2719942_2720461_+	YfiR family protein	NA	NA	NA	NA	NA
WP_001030985.1|2720453_2721674_+	diguanylate cyclase DgcN	NA	A0A2K8I9Y5	Pseudomonas_phage	36.2	5.8e-08
WP_000065257.1|2721830_2722178_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_000469801.1|2722218_2722986_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_000043266.1|2723030_2723579_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_000256453.1|2723597_2723846_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_000460052.1|2724098_2725460_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_001537507.1|2725625_2726417_+	inner membrane protein YpjD	NA	NA	NA	NA	NA
WP_127172650.1|2726436_2727723_+	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_001287926.1|2727843_2728449_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001518875.1|2728483_2729074_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_001059151.1|2729197_2730076_+	NAD(+) kinase	NA	NA	NA	NA	NA
WP_000880965.1|2730161_2731823_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001203445.1|2731971_2732310_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_001112990.1|2732475_2732766_-	RnfH family protein	NA	NA	NA	NA	NA
WP_000242603.1|2732755_2733232_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_001518569.1|2733381_2733864_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	5.2e-29
WP_001237694.1|2734478_2745953_+	biofilm-associated protein BapA	NA	NA	NA	NA	NA
WP_000533863.1|2746017_2747427_+	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_000196151.1|2747423_2749604_+	type I secretion system permease/ATPase	NA	F2Y302	Organic_Lake_phycodnavirus	34.0	1.3e-18
WP_012543392.1|2749611_2750775_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_000980500.1|2751326_2751545_-	hypothetical protein	NA	E5G6Q4	Salmonella_phage	100.0	2.1e-38
WP_001102269.1|2751613_2752714_-	phage late control D family protein	NA	E5G6Q3	Salmonella_phage	100.0	2.6e-201
WP_000980411.1|2752710_2753196_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	100.0	6.7e-77
WP_001282768.1|2753192_2756000_-|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	99.9	0.0e+00
WP_000763316.1|2755992_2756112_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	100.0	1.8e-15
WP_001280963.1|2756126_2756429_-|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	100.0	1.5e-45
WP_001207651.1|2756483_2756999_-|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	100.0	9.3e-93
WP_000046107.1|2757008_2758181_-|tail	phage tail sheath protein	tail	E5G6P7	Salmonella_phage	99.7	5.7e-223
WP_000974843.1|2758283_2758508_-	helix-turn-helix domain-containing protein	NA	E5G6P5	Salmonella_phage	100.0	1.5e-34
WP_000143187.1|2759377_2759953_-|tail	tail fiber assembly protein	tail	E5G6P1	Salmonella_phage	100.0	4.3e-107
WP_001274649.1|2759952_2761806_-|tail	phage tail protein	tail	E5G6P0	Salmonella_phage	100.0	0.0e+00
WP_001086804.1|2761802_2762408_-|tail	phage tail protein I	tail	E5G6N9	Salmonella_phage	100.0	1.3e-117
WP_000268332.1|2762400_2763309_-|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	100.0	5.4e-160
WP_000189373.1|2763295_2763655_-|plate	baseplate assembly protein	plate	E5G6N7	Salmonella_phage	100.0	1.1e-60
WP_001672413.1|2763651_2764230_-|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	100.0	1.4e-108
WP_000958562.1|2764307_2765159_+	hypothetical protein	NA	E5G6N5	Salmonella_phage	100.0	2.8e-163
WP_000343949.1|2765160_2765607_-	phage virion morphogenesis protein	NA	E5G6N4	Salmonella_phage	99.3	2.3e-71
WP_001039958.1|2765599_2766031_-|tail	phage tail protein	tail	E5G6N3	Salmonella_phage	100.0	1.7e-76
WP_000196199.1|2766126_2766555_-|lysis	LysB family phage lysis regulatory protein	lysis	E5G6N2	Salmonella_phage	100.0	2.3e-68
WP_001069923.1|2766551_2767067_-	lysozyme	NA	E5G6N1	Salmonella_phage	100.0	5.3e-96
WP_000171565.1|2767047_2767263_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	100.0	5.9e-33
WP_000868184.1|2767266_2767470_-|tail	tail protein X	tail	E5G6M9	Salmonella_phage	100.0	3.8e-34
WP_000673537.1|2767469_2767934_-|head	head completion/stabilization protein	head	E5G6M8	Salmonella_phage	100.0	9.9e-86
WP_000059173.1|2768027_2768678_-|terminase	terminase endonuclease subunit	terminase	E5G6M7	Salmonella_phage	100.0	4.9e-115
WP_000730760.1|2768681_2769743_-|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	99.7	6.0e-195
WP_000216276.1|2769759_2770593_-|capsid	GPO family capsid scaffolding protein	capsid	E5G6M5	Salmonella_phage	100.0	3.1e-130
WP_001098395.1|2770735_2772502_+|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	97.1	0.0e+00
WP_001542203.1|2772501_2773542_+|portal	phage portal protein	portal	E5G6M3	Salmonella_phage	100.0	5.5e-201
WP_001284991.1|2773645_2775310_-	AIPR family protein	NA	E5G6M2	Salmonella_phage	100.0	0.0e+00
WP_001673609.1|2775623_2776301_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001217571.1|2776414_2776648_-	DinI family protein	NA	E5G6M1	Salmonella_phage	98.7	1.8e-35
WP_001154433.1|2776658_2776847_-	hypothetical protein	NA	E5G6M0	Salmonella_phage	100.0	1.4e-27
WP_000017507.1|2776999_2779414_-	replication endonuclease	NA	E5G6L9	Salmonella_phage	100.0	0.0e+00
WP_000104187.1|2779410_2780268_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	100.0	6.8e-165
WP_000752613.1|2780264_2780492_-	TraR/DksA family transcriptional regulator	NA	E5G6L7	Salmonella_phage	100.0	2.7e-36
WP_001244219.1|2780491_2780725_-	DUF2732 family protein	NA	E5G6L6	Salmonella_phage	100.0	1.7e-33
WP_000963474.1|2780792_2781134_-	DUF5347 domain-containing protein	NA	E5G6L5	Salmonella_phage	100.0	1.2e-56
WP_000956190.1|2781097_2781298_-	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	100.0	2.4e-33
WP_000460848.1|2781305_2781815_-	phage regulatory CII family protein	NA	E5G6L3	Salmonella_phage	100.0	1.5e-87
WP_000102105.1|2781848_2782091_-	Rha family transcriptional regulator	NA	A0A1S6KZZ6	Salmonella_phage	97.5	6.8e-38
WP_000932273.1|2782212_2782845_+	phage repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	51.4	6.3e-59
WP_000218402.1|2782847_2783864_+|integrase	site-specific integrase	integrase	E5G6L0	Salmonella_phage	100.0	5.0e-199
WP_000360326.1|2784416_2785079_+	hypothetical protein	NA	E5G6K9	Salmonella_phage	100.0	3.4e-124
WP_001142974.1|2785340_2785934_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000445376.1|2786332_2787136_+	DUF3800 domain-containing protein	NA	Q19UP3	Mannheimia_phage	44.7	1.2e-62
WP_089113803.1|2787931_2789043_-|transposase	IS3-like element IS1351 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	25.6	7.6e-07
2787948:2787962	attR	TTTGAGTTCCCGGCC	NA	NA	NA	NA
>prophage 9
NZ_CP007175	Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110354 chromosome, complete genome	4711160	3249908	3291449	4711160	terminase,portal,tail,holin,integrase,capsid,head,tRNA	Cronobacter_phage(67.57%)	46	3245247:3245262	3288668:3288683
3245247:3245262	attL	ATGGCGGCGTAGCCAG	NA	NA	NA	NA
WP_001264394.1|3249908_3250922_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	59.5	2.8e-109
WP_001144069.1|3251149_3251365_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_000918865.1|3251599_3253345_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	38.4	2.1e-72
WP_001519776.1|3253494_3255342_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.7	8.4e-35
WP_000237776.1|3255465_3255972_-	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA	NA
WP_000340945.1|3256295_3256598_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001680744.1|3257975_3259676_-	hypothetical protein	NA	F1BUJ7	Cronobacter_phage	81.4	9.9e-224
WP_000200789.1|3259678_3260224_-	hypothetical protein	NA	F1BUJ9	Cronobacter_phage	72.0	3.2e-59
WP_000267957.1|3260195_3260921_-	hypothetical protein	NA	F1BUK1	Cronobacter_phage	53.5	3.7e-63
WP_000861353.1|3260910_3261465_-|tail	tail fiber assembly protein	tail	S4TUB9	Salmonella_phage	89.0	2.7e-90
WP_038397065.1|3261477_3263712_-|tail	tail protein	tail	Q8HAB4	Salmonella_phage	73.5	1.6e-181
WP_001001828.1|3263721_3264309_-	hypothetical protein	NA	F1BUK5	Cronobacter_phage	82.6	3.8e-90
WP_000136921.1|3264301_3265486_-	hypothetical protein	NA	F1BUK6	Cronobacter_phage	78.4	6.7e-179
WP_001002797.1|3265482_3265812_-	DUF2590 family protein	NA	F1BUK8	Cronobacter_phage	72.4	3.8e-39
WP_000811094.1|3265808_3267779_-|tail	phage tail tape measure protein	tail	F1BUK9	Cronobacter_phage	70.8	3.2e-274
WP_000411339.1|3267966_3268224_-	hypothetical protein	NA	A5X9I7	Aeromonas_virus	63.4	3.6e-21
WP_000376373.1|3268370_3268703_-	hypothetical protein	NA	F1BUL2	Cronobacter_phage	70.9	1.5e-35
WP_000175560.1|3268702_3269044_-	M15 family metallopeptidase	NA	F1BUL3	Cronobacter_phage	91.1	2.2e-50
WP_001154425.1|3269040_3269334_-|holin	holin	holin	C7BGD7	Burkholderia_phage	46.2	1.3e-14
WP_000166743.1|3269343_3269799_-	DUF2597 family protein	NA	F1BUL4	Cronobacter_phage	72.2	1.5e-57
WP_000220203.1|3269795_3270923_-	DUF2586 domain-containing protein	NA	F1BUL5	Cronobacter_phage	83.7	1.9e-175
WP_000560080.1|3270919_3271627_-	hypothetical protein	NA	F1BUL6	Cronobacter_phage	76.1	1.3e-100
WP_000084218.1|3271623_3272130_-|tail	phage tail protein	tail	F1BUL7	Cronobacter_phage	69.1	1.2e-63
WP_000447487.1|3272126_3272615_-|head	head completion/stabilization protein	head	F1BUL8	Cronobacter_phage	82.7	2.3e-64
WP_001218537.1|3272675_3273377_-|terminase	terminase	terminase	F1BUM0	Cronobacter_phage	66.8	9.4e-88
WP_000550495.1|3273380_3274403_-|capsid	phage major capsid protein, P2 family	capsid	F1BUM2	Cronobacter_phage	81.5	3.9e-159
WP_038397067.1|3274464_3275268_-|capsid	phage capsid scaffolding protein	capsid	F1BUM4	Cronobacter_phage	56.8	5.0e-77
WP_001151939.1|3275428_3277204_+	hypothetical protein	NA	F1BUM5	Cronobacter_phage	83.1	9.8e-291
WP_000038213.1|3277200_3278262_+|portal	phage portal protein	portal	F1BUM7	Cronobacter_phage	76.8	6.7e-162
WP_001552031.1|3278258_3278582_+	ogr/Delta-like zinc finger family protein	NA	F1BUM8	Cronobacter_phage	92.3	8.0e-50
WP_000353141.1|3278555_3278762_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000170874.1|3278881_3280903_-	replication endonuclease	NA	F1BUM9	Cronobacter_phage	74.5	7.9e-297
WP_000279404.1|3280899_3281760_-	DNA adenine methylase	NA	F1BUN1	Cronobacter_phage	82.0	1.1e-130
WP_000551169.1|3281750_3281984_-	DUF2732 family protein	NA	NA	NA	NA	NA
WP_000022786.1|3282051_3282453_-	hypothetical protein	NA	F1BUN2	Cronobacter_phage	66.9	1.4e-48
WP_000996837.1|3282452_3282878_-	hypothetical protein	NA	F1BUN5	Cronobacter_phage	49.6	2.2e-23
WP_000643375.1|3282867_3283095_-	DUF2724 domain-containing protein	NA	NA	NA	NA	NA
WP_000460878.1|3283104_3283608_-	hypothetical protein	NA	F1BUN6	Cronobacter_phage	72.5	3.5e-60
WP_001247711.1|3283638_3283860_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000514631.1|3284003_3284585_+	phage repressor protein	NA	A0A218M4J1	Erwinia_phage	37.2	1.2e-27
WP_000568371.1|3284601_3285168_+	hypothetical protein	NA	Q4ZA70	Staphylococcus_virus	32.2	7.5e-19
WP_001145219.1|3285171_3286209_+|integrase	tyrosine-type recombinase/integrase	integrase	F1BUS9	Erwinia_phage	63.9	1.5e-121
WP_000627044.1|3286198_3287980_+	ATP-binding protein	NA	X2KLG0	Campylobacter_phage	23.2	6.4e-08
WP_000213760.1|3288237_3289005_-	siderophore-interacting protein	NA	NA	NA	NA	NA
3288668:3288683	attR	CTGGCTACGCCGCCAT	NA	NA	NA	NA
WP_000983441.1|3289236_3289884_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000478462.1|3289880_3291449_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	33.5	2.2e-12
