assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000612055.1_ASM61205v1	NZ_CP007519	Trueperella pyogenes strain TP6375 chromosome, complete genome	1	2061489-2063529	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas4,WYL,DEDDh,DinG,csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Type I-E	GTGGTCCCCGCGCAGGCGGGGATGAGCC,GTGGTCCCCGCGCAGGCGGGGATGAGCC,GTGGTCCCCGCGCAGGCGGGGATGAGCC	28,28,28	0	0	NA	NA	I-E:I-E:I-E	32,33,33	33	TypeI-E	cas4,WYL,DEDDh,DinG,csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|67aa|up_9|NZ_CP007519.1_2050901_2051102_-	pfam00665, rve, Integrase core domain	NA|90aa|up_8|NZ_CP007519.1_2051271_2051541_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	cas3|952aa|up_7|NZ_CP007519.1_2051991_2054847_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|566aa|up_6|NZ_CP007519.1_2055134_2056832_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cse2gr11|210aa|up_5|NZ_CP007519.1_2056858_2057488_+	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas7|381aa|up_4|NZ_CP007519.1_2057511_2058654_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|235aa|up_3|NZ_CP007519.1_2058657_2059362_+	pfam09704, Cas_Cas5d, CRISPR-associated protein (Cas_Cas5)	cas6e|223aa|up_2|NZ_CP007519.1_2059361_2060030_+	pfam08798, CRISPR_assoc, CRISPR associated protein	cas1|311aa|up_1|NZ_CP007519.1_2060032_2060965_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|115aa|up_0|NZ_CP007519.1_2060969_2061314_+	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	NA|69aa|down_0|NZ_CP007519.1_2063699_2063906_-	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	NA|73aa|down_1|NZ_CP007519.1_2064008_2064227_-	pfam03693, ParD_antitoxin, Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH	NA|263aa|down_2|NZ_CP007519.1_2064449_2065238_-	pfam07751, Abi_2, Abi-like protein	NA|205aa|down_3|NZ_CP007519.1_2065491_2066106_-	pfam01381, HTH_3, Helix-turn-helix	NA|566aa|down_4|NZ_CP007519.1_2066370_2068068_-	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins	NA|292aa|down_5|NZ_CP007519.1_2068119_2068995_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|299aa|down_6|NZ_CP007519.1_2069003_2069900_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|434aa|down_7|NZ_CP007519.1_2069902_2071204_-	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|434aa|down_8|NZ_CP007519.1_2071261_2072563_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|911aa|down_9|NZ_CP007519.1_2073666_2076399_+	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional
GCF_000612055.1_ASM61205v1	NZ_CP007519	Trueperella pyogenes strain TP6375 chromosome, complete genome	2	2084512-2084610	2	CRISPRCasFinder	no		cas4,WYL,DEDDh,DinG,csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GAGAAGGCCGCCCGAGAGGCCGC	23	0	0	NA	NA	NA	1	1	Orphan	cas4,WYL,DEDDh,DinG,csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|566aa|up_9|NZ_CP007519.1_2066370_2068068_-	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins	NA|292aa|up_8|NZ_CP007519.1_2068119_2068995_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|299aa|up_7|NZ_CP007519.1_2069003_2069900_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|434aa|up_6|NZ_CP007519.1_2069902_2071204_-	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|434aa|up_5|NZ_CP007519.1_2071261_2072563_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|911aa|up_4|NZ_CP007519.1_2073666_2076399_+	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional	NA|964aa|up_3|NZ_CP007519.1_2076654_2079546_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|456aa|up_2|NZ_CP007519.1_2079626_2080994_+	pfam18755, RAMA, Restriction Enzyme Adenine Methylase Associated	NA|335aa|up_1|NZ_CP007519.1_2081038_2082043_-	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|421aa|up_0|NZ_CP007519.1_2082075_2083338_-	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|176aa|down_0|NZ_CP007519.1_2085327_2085855_-	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase	NA|473aa|down_1|NZ_CP007519.1_2085923_2087342_+	pfam02113, Peptidase_S13, D-Ala-D-Ala carboxypeptidase 3 (S13) family	NA|288aa|down_2|NZ_CP007519.1_2087438_2088302_+	TIGR03883, DUF2342_F420, uncharacterized protein, coenzyme F420 biosynthesis associated	NA|348aa|down_3|NZ_CP007519.1_2088301_2089345_+	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]	NA|186aa|down_4|NZ_CP007519.1_2089341_2089899_+	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]	NA|713aa|down_5|NZ_CP007519.1_2089899_2092038_+	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH	NA|188aa|down_6|NZ_CP007519.1_2092034_2092598_+	PRK09347, folE, GTP cyclohydrolase I; Provisional	NA|260aa|down_7|NZ_CP007519.1_2092616_2093396_+	cd00739, DHPS, DHPS subgroup of Pterin binding enzymes	NA|276aa|down_8|NZ_CP007519.1_2093407_2094235_+	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]	NA|159aa|down_9|NZ_CP007519.1_2094248_2094725_+	pfam11377, DUF3180, Protein of unknown function (DUF3180)
GCF_000612055.1_ASM61205v1	NZ_CP007519	Trueperella pyogenes strain TP6375 chromosome, complete genome	3	2084710-2084888	3	CRISPRCasFinder	no		cas4,WYL,DEDDh,DinG,csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GAGAAGGCCGCCCGAGAGGCCGC	23	0	0	NA	NA	NA	3	3	Orphan	cas4,WYL,DEDDh,DinG,csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|566aa|up_9|NZ_CP007519.1_2066370_2068068_-	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins	NA|292aa|up_8|NZ_CP007519.1_2068119_2068995_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|299aa|up_7|NZ_CP007519.1_2069003_2069900_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|434aa|up_6|NZ_CP007519.1_2069902_2071204_-	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|434aa|up_5|NZ_CP007519.1_2071261_2072563_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|911aa|up_4|NZ_CP007519.1_2073666_2076399_+	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional	NA|964aa|up_3|NZ_CP007519.1_2076654_2079546_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|456aa|up_2|NZ_CP007519.1_2079626_2080994_+	pfam18755, RAMA, Restriction Enzyme Adenine Methylase Associated	NA|335aa|up_1|NZ_CP007519.1_2081038_2082043_-	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|421aa|up_0|NZ_CP007519.1_2082075_2083338_-	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|176aa|down_0|NZ_CP007519.1_2085327_2085855_-	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase	NA|473aa|down_1|NZ_CP007519.1_2085923_2087342_+	pfam02113, Peptidase_S13, D-Ala-D-Ala carboxypeptidase 3 (S13) family	NA|288aa|down_2|NZ_CP007519.1_2087438_2088302_+	TIGR03883, DUF2342_F420, uncharacterized protein, coenzyme F420 biosynthesis associated	NA|348aa|down_3|NZ_CP007519.1_2088301_2089345_+	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]	NA|186aa|down_4|NZ_CP007519.1_2089341_2089899_+	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]	NA|713aa|down_5|NZ_CP007519.1_2089899_2092038_+	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH	NA|188aa|down_6|NZ_CP007519.1_2092034_2092598_+	PRK09347, folE, GTP cyclohydrolase I; Provisional	NA|260aa|down_7|NZ_CP007519.1_2092616_2093396_+	cd00739, DHPS, DHPS subgroup of Pterin binding enzymes	NA|276aa|down_8|NZ_CP007519.1_2093407_2094235_+	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]	NA|159aa|down_9|NZ_CP007519.1_2094248_2094725_+	pfam11377, DUF3180, Protein of unknown function (DUF3180)
