assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000600205.1_ASM60020v1	NZ_CP006826	Helicobacter pylori oki828 chromosome, complete genome	1	126335-126421	1	CRISPRCasFinder	no		cas14j,cas3,RT,DEDDh	Orphan	CCCACTCTTGTTTGTCTTTTGTTT	24	0	0	NA	NA	NA	1	1	Orphan	cas14j,cas3,RT,DEDDh	NA|99aa|up_4|NZ_CP006826.1_118514_118811_+,NA|290aa|down_7|NZ_CP006826.1_135060_135930_+	NA|306aa|up_9|NZ_CP006826.1_112591_113509_-	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase	NA|621aa|up_8|NZ_CP006826.1_114335_116198_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|192aa|up_7|NZ_CP006826.1_116228_116804_-	PRK14149, PRK14149, heat shock protein GrpE; Provisional	NA|277aa|up_6|NZ_CP006826.1_116803_117634_-	PRK03911, PRK03911, HrcA family transcriptional regulator	NA|210aa|up_5|NZ_CP006826.1_117864_118494_+	PRK05834, PRK05834, hypothetical protein; Provisional	NA|99aa|up_4|NZ_CP006826.1_118514_118811_+	NA	NA|628aa|up_3|NZ_CP006826.1_118836_120720_-	COG2604, COG2604, Uncharacterized protein conserved in bacteria [Function unknown]	NA|515aa|up_2|NZ_CP006826.1_120783_122328_-	PRK13588, PRK13588, flagellin B; Provisional	NA|737aa|up_1|NZ_CP006826.1_122493_124704_+	PRK05582, PRK05582, type I DNA topoisomerase	NA|309aa|up_0|NZ_CP006826.1_124696_125623_+	COG0731, COG0731, Fe-S oxidoreductases [Energy production and conversion]	NA|813aa|down_0|NZ_CP006826.1_126939_129378_-	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated	NA|613aa|down_1|NZ_CP006826.1_129735_131574_+	PRK12305, thrS, threonyl-tRNA synthetase; Reviewed	NA|204aa|down_2|NZ_CP006826.1_131570_132182_+	TIGR00168, Translation_initiation_factor_IF-3, translation initiation factor IF-3	NA|65aa|down_3|NZ_CP006826.1_132162_132357_+	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|117aa|down_4|NZ_CP006826.1_132453_132804_+	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|287aa|down_5|NZ_CP006826.1_133003_133864_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|147aa|down_6|NZ_CP006826.1_134218_134659_+	pfam06518, DUF1104, Protein of unknown function (DUF1104)	NA|290aa|down_7|NZ_CP006826.1_135060_135930_+	NA	NA|456aa|down_8|NZ_CP006826.1_136545_137913_-	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form	NA|414aa|down_9|NZ_CP006826.1_137912_139154_-	TIGR00814, membrane_transport_protein_YhjV, serine transporter
GCF_000600205.1_ASM60020v1	NZ_CP006826	Helicobacter pylori oki828 chromosome, complete genome	2	329555-329682	2	CRISPRCasFinder	no		cas14j,cas3,RT,DEDDh	Orphan	TCTTGGGTTTCTAATTTTTGCGGTGTTTCTGCACTTTCTTG	41	0	0	NA	NA	NA	1	1	Orphan	cas14j,cas3,RT,DEDDh	NA|231aa|up_8|NZ_CP006826.1_320984_321677_-,NA|126aa|up_6|NZ_CP006826.1_322892_323270_+,NA	NA|294aa|up_9|NZ_CP006826.1_320049_320931_+	cd10938, CE4_HpPgdA_like, Catalytic domain of Helicobacter pylori peptidoglycan deacetylase (HpPgdA) and similar proteins	NA|231aa|up_8|NZ_CP006826.1_320984_321677_-	NA	NA|370aa|up_7|NZ_CP006826.1_321687_322797_-	pfam01555, N6_N4_Mtase, DNA methylase	NA|126aa|up_6|NZ_CP006826.1_322892_323270_+	NA	NA|322aa|up_5|NZ_CP006826.1_323269_324235_+	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|382aa|up_4|NZ_CP006826.1_324240_325386_-	pfam06779, MFS_4, Uncharacterized MFS-type transporter YbfB	NA|252aa|up_3|NZ_CP006826.1_325875_326631_-	TIGR04109, heme_ox_HugZ, heme oxygenase, HugZ family	NA|542aa|up_2|NZ_CP006826.1_326690_328316_-	TIGR00456, Arginine--tRNA_ligase, arginyl-tRNA synthetase	NA|80aa|up_1|NZ_CP006826.1_328318_328558_-	PRK00720, tatA, twin-arginine translocase TatA/TatE family subunit	NA|207aa|up_0|NZ_CP006826.1_328628_329249_-	TIGR03263, Guanylate_kinase, guanylate kinase	NA|181aa|down_0|NZ_CP006826.1_330585_331128_+	PRK13912, PRK13912, nuclease NucT; Provisional	NA|246aa|down_1|NZ_CP006826.1_331134_331872_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|238aa|down_2|NZ_CP006826.1_332001_332715_+	PRK00249, flgH, flagellar basal body L-ring protein FlgH	NA|228aa|down_3|NZ_CP006826.1_332732_333416_+	TIGR03584, PseF, pseudaminic acid cytidylyltransferase	NA|298aa|down_4|NZ_CP006826.1_333385_334279_+	COG3980, spsG, Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]	NA|181aa|down_5|NZ_CP006826.1_334275_334818_+	TIGR03585, PseH, UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	NA|313aa|down_6|NZ_CP006826.1_334750_335689_-	COG1663, LpxK, Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane]	NA|261aa|down_7|NZ_CP006826.1_335685_336468_-	PRK13980, PRK13980, NAD synthetase; Provisional	NA|331aa|down_8|NZ_CP006826.1_336716_337709_+	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|269aa|down_9|NZ_CP006826.1_337733_338540_+	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
GCF_000600205.1_ASM60020v1	NZ_CP006826	Helicobacter pylori oki828 chromosome, complete genome	3	500164-500261	3	CRISPRCasFinder	no		cas14j,cas3,RT,DEDDh	Orphan	TGCCACTTGTTCCACTCGCACTA	23	0	0	NA	NA	NA	1	1	Orphan	cas14j,cas3,RT,DEDDh	NA|126aa|up_8|NZ_CP006826.1_479833_480211_+,NA|191aa|up_7|NZ_CP006826.1_480188_480761_+,NA|156aa|up_5|NZ_CP006826.1_481652_482120_-,NA|75aa|up_4|NZ_CP006826.1_484243_484468_-,NA|85aa|up_3|NZ_CP006826.1_484460_484715_-,NA|173aa|up_2|NZ_CP006826.1_495736_496255_-,NA|99aa|up_0|NZ_CP006826.1_497200_497497_-,NA|45aa|down_2|NZ_CP006826.1_504626_504761_-,NA|79aa|down_4|NZ_CP006826.1_507339_507576_-,NA|88aa|down_5|NZ_CP006826.1_507586_507850_-,NA|160aa|down_7|NZ_CP006826.1_508141_508621_-,NA|275aa|down_8|NZ_CP006826.1_508724_509549_-,NA|99aa|down_9|NZ_CP006826.1_510330_510627_+	NA|217aa|up_9|NZ_CP006826.1_479121_479772_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|126aa|up_8|NZ_CP006826.1_479833_480211_+	NA	NA|191aa|up_7|NZ_CP006826.1_480188_480761_+	NA	NA|267aa|up_6|NZ_CP006826.1_480882_481683_-	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system	NA|156aa|up_5|NZ_CP006826.1_481652_482120_-	NA	NA|75aa|up_4|NZ_CP006826.1_484243_484468_-	NA	NA|85aa|up_3|NZ_CP006826.1_484460_484715_-	NA	NA|173aa|up_2|NZ_CP006826.1_495736_496255_-	NA	NA|315aa|up_1|NZ_CP006826.1_496251_497196_-	TIGR02788, conjugal_transfer_protein, P-type DNA transfer ATPase VirB11	NA|99aa|up_0|NZ_CP006826.1_497200_497497_-	NA	NA|401aa|down_0|NZ_CP006826.1_500654_501857_-	COG2948, VirB10, Type IV secretory pathway, VirB10 components [Intracellular trafficking and secretion]	NA|556aa|down_1|NZ_CP006826.1_501853_503521_-	cd06911, VirB9_CagX_TrbG, VirB9/CagX/TrbG, a component of the type IV secretion system	NA|45aa|down_2|NZ_CP006826.1_504626_504761_-	NA	NA|861aa|down_3|NZ_CP006826.1_504757_507340_-	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family	NA|79aa|down_4|NZ_CP006826.1_507339_507576_-	NA	NA|88aa|down_5|NZ_CP006826.1_507586_507850_-	NA	NA|95aa|down_6|NZ_CP006826.1_507860_508145_-	pfam04956, TrbC, TrbC/VIRB2 family	NA|160aa|down_7|NZ_CP006826.1_508141_508621_-	NA	NA|275aa|down_8|NZ_CP006826.1_508724_509549_-	NA	NA|99aa|down_9|NZ_CP006826.1_510330_510627_+	NA
