The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP007244	Bacillus amyloliquefaciens subsp. plantarum TrigoCor1448, complete genome	3957904	168741	180717	3957904	portal,holin,plate	uncultured_Caudovirales_phage(46.15%)	18	NA	NA
WP_025284113.1|168741_169401_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A090DBR9	Clostridium_phage	35.4	1.5e-26
WP_025284114.1|169414_170395_+	hypothetical protein	NA	H7BV96	unidentified_phage	31.7	7.8e-40
WP_025284115.1|170391_170658_+	DUF2577 family protein	NA	NA	NA	NA	NA
WP_025284116.1|170670_171096_+	DUF2634 domain-containing protein	NA	A0A2H4J6K5	uncultured_Caudovirales_phage	35.9	1.9e-11
WP_025284117.1|171088_172135_+|plate	baseplate J/gp47 family protein	plate	A0A0A7S0L4	Clostridium_phage	40.8	1.3e-61
WP_025284118.1|172118_172697_+	YmfQ family protein	NA	A0A2H4J717	uncultured_Caudovirales_phage	33.1	1.3e-13
WP_025284119.1|172693_172966_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025284120.1|172968_174066_+	hypothetical protein	NA	M4ZRP1	Bacillus_phage	53.5	3.1e-13
WP_025284121.1|174077_174416_+|portal	phage portal protein	portal	A0A2H4JCI0	uncultured_Caudovirales_phage	34.6	5.3e-12
WP_025284122.1|174412_174577_+	XkdX family protein	NA	A0A2H4JAA1	uncultured_Caudovirales_phage	60.4	8.7e-13
WP_025284123.1|174672_175575_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025284124.1|175646_175925_+	protein xhlA	NA	A0A2H4JD40	uncultured_Caudovirales_phage	70.7	1.5e-28
WP_025284125.1|175937_176201_+|holin	phage holin	holin	A0A2H4J6M0	uncultured_Caudovirales_phage	69.0	1.1e-25
WP_025284126.1|176256_177201_+	LysM peptidoglycan-binding domain-containing protein	NA	Q9ZXD7	Bacillus_phage	63.1	2.6e-93
WP_025284127.1|177243_177567_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025284128.1|177690_178815_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025284129.1|179049_179379_-	hypothetical protein	NA	A0A1P8CWI7	Bacillus_phage	63.5	6.5e-23
WP_021494571.1|179589_180717_+	tetratricopeptide repeat protein	NA	A0A1P8CWN8	Bacillus_phage	48.3	7.3e-90
>prophage 2
NZ_CP007244	Bacillus amyloliquefaciens subsp. plantarum TrigoCor1448, complete genome	3957904	671141	681032	3957904		Synechococcus_phage(50.0%)	9	NA	NA
WP_007408896.1|671141_672434_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	27.3	4.5e-19
WP_025284370.1|672509_673229_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3G7P8	Synechococcus_phage	45.2	2.6e-48
WP_003155758.1|673228_673483_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	M4QPE7	Synechococcus_phage	33.3	4.7e-05
WP_007408898.1|673479_674163_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_025284371.1|674146_676375_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.7	5.5e-158
WP_007408900.1|676350_677781_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	6.2e-54
WP_015239317.1|677872_678913_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	41.9	3.7e-64
WP_007408902.1|678909_679497_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.8	1.3e-26
WP_025284372.1|679493_681032_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	50.8	6.7e-78
>prophage 3
NZ_CP007244	Bacillus amyloliquefaciens subsp. plantarum TrigoCor1448, complete genome	3957904	1238402	1270302	3957904	portal,tail,holin,plate,terminase	Bacillus_phage(29.03%)	40	NA	NA
WP_003154883.1|1238402_1239533_+	tetratricopeptide repeat protein	NA	A0A1P8CWN8	Bacillus_phage	47.9	1.3e-94
WP_015417280.1|1239799_1240753_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A218KC88	Bacillus_phage	69.3	1.1e-62
WP_007610770.1|1240790_1241168_-	PH domain-containing protein	NA	A5GYQ0	Lactococcus_phage	41.4	1.5e-15
WP_015239671.1|1241278_1241884_+	poly-gamma-glutamate hydrolase family protein	NA	A0A0Y0AJU6	Bacillus_phage	48.3	6.1e-43
WP_007610775.1|1242022_1242613_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4JA43	uncultured_Caudovirales_phage	51.7	3.0e-39
WP_003154871.1|1242762_1243101_-	helix-turn-helix transcriptional regulator	NA	A0A2H4J6F9	uncultured_Caudovirales_phage	45.8	8.4e-18
WP_007407285.1|1243291_1243471_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025284603.1|1243460_1244288_+	hypothetical protein	NA	S6BFM4	Thermus_phage	49.0	2.2e-19
WP_014417520.1|1244187_1244988_+	ATP-binding protein	NA	A6XMI1	Bacillus_virus	45.3	3.0e-58
WP_007407281.1|1245252_1245594_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007407280.1|1245583_1245787_+	hypothetical protein	NA	A0A2H4J4M6	uncultured_Caudovirales_phage	50.0	1.9e-12
WP_007407279.1|1245900_1246413_+	sigma-70 family RNA polymerase sigma factor	NA	A0A0K2CNQ1	Brevibacillus_phage	44.6	3.8e-22
WP_025284604.1|1246525_1247323_+|terminase	terminase	terminase	A0A0S2MVB6	Bacillus_phage	49.0	3.0e-58
WP_025284605.1|1247319_1248618_+|terminase	PBSX family phage terminase large subunit	terminase	M4ZRM5	Bacillus_phage	59.2	9.4e-150
WP_015239678.1|1248621_1250058_+|portal	phage portal protein	portal	A0A1B1P7C8	Bacillus_phage	55.1	5.7e-140
WP_007407275.1|1250077_1250923_+|portal	phage portal protein	portal	A0A1B1P7E4	Bacillus_phage	58.1	2.5e-55
WP_007407274.1|1250949_1251885_+|portal	phage portal protein	portal	A0A1B1P7E3	Bacillus_phage	62.8	3.3e-104
WP_025284606.1|1251901_1252285_+	DUF3199 family protein	NA	NA	NA	NA	NA
WP_007407272.1|1252281_1252638_+	DUF3599 family protein	NA	NA	NA	NA	NA
WP_025284607.1|1252634_1253138_+	HK97 gp10 family phage protein	NA	A0A249XXA4	Clostridium_phage	39.9	1.3e-35
WP_015417289.1|1253134_1253581_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007610809.1|1253577_1253787_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025284608.1|1253786_1255184_+|portal	phage portal protein	portal	A0A0A7RTT5	Clostridium_phage	40.4	1.5e-81
WP_003154837.1|1255185_1255629_+|tail	phage tail tube protein	tail	A0A0K2CNG3	Brevibacillus_phage	45.2	8.4e-26
WP_003154836.1|1255705_1256152_+|portal	phage portal protein	portal	A0A0A7RTY8	Clostridium_phage	35.8	1.0e-10
WP_025284609.1|1256333_1261460_+	transglycosylase SLT domain-containing protein	NA	A0A1L2JY60	Aeribacillus_phage	47.0	8.8e-42
WP_025284610.1|1261452_1262112_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A090DBR9	Clostridium_phage	34.0	3.4e-23
WP_015239687.1|1262125_1263103_+	hypothetical protein	NA	A0A1L6BY20	Clostridium_phage	30.6	3.7e-34
WP_007610818.1|1263102_1263369_+	DUF2577 family protein	NA	S6C459	Thermus_phage	38.6	1.2e-06
WP_025284611.1|1263472_1263898_+	DUF2634 domain-containing protein	NA	A0A2H4J6K5	uncultured_Caudovirales_phage	38.6	1.1e-11
WP_015239688.1|1263890_1264937_+|plate	baseplate J/gp47 family protein	plate	S6AVU3	Thermus_phage	44.1	1.3e-69
WP_015239689.1|1264920_1265499_+	YmfQ family protein	NA	A0A0A7RTT8	Clostridium_phage	28.9	3.1e-12
WP_015239690.1|1265495_1265768_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015239691.1|1265770_1267360_+	hypothetical protein	NA	A0A2H4J4R1	uncultured_Caudovirales_phage	54.1	2.4e-14
WP_051483351.1|1267372_1267798_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012117366.1|1267802_1268000_+	XkdX family protein	NA	A0A2H4JAA1	uncultured_Caudovirales_phage	63.6	2.5e-14
WP_025284613.1|1268056_1268818_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003154815.1|1268869_1269133_+	protein xhlA	NA	A0A2H4JD40	uncultured_Caudovirales_phage	63.1	8.8e-23
WP_003154813.1|1269146_1269410_+|holin	phage holin	holin	A0A2H4J6M0	uncultured_Caudovirales_phage	65.5	2.3e-23
WP_025284614.1|1269423_1270302_+	LysM peptidoglycan-binding domain-containing protein	NA	Q9ZXD7	Bacillus_phage	60.2	1.1e-80
>prophage 4
NZ_CP007244	Bacillus amyloliquefaciens subsp. plantarum TrigoCor1448, complete genome	3957904	1821764	1827977	3957904		Bacillus_phage(50.0%)	7	NA	NA
WP_003154061.1|1821764_1822157_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	G3MBF1	Bacillus_virus	59.1	3.8e-30
WP_007611605.1|1822116_1824219_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	U5PY35	Bacillus_phage	85.7	0.0e+00
WP_012117608.1|1824236_1825226_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	F8WQ21	Bacillus_phage	83.0	1.1e-155
WP_012117609.1|1825274_1825895_+	hypothetical protein	NA	A0A127AYS1	Bacillus_phage	47.9	2.1e-46
WP_025284769.1|1825943_1826702_-	N-acetylmuramoyl-L-alanine amidase	NA	E5DV68	Deep-sea_thermophilic_phage	50.4	2.1e-53
WP_007410369.1|1826735_1826960_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015417523.1|1827008_1827977_+	stage V sporulation protein K	NA	G3MAX6	Bacillus_virus	40.9	8.0e-53
>prophage 5
NZ_CP007244	Bacillus amyloliquefaciens subsp. plantarum TrigoCor1448, complete genome	3957904	2268659	2274913	3957904		Staphylococcus_phage(66.67%)	10	NA	NA
WP_007409428.1|2268659_2269253_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	36.6	2.6e-14
WP_007409427.1|2269242_2269998_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	25.7	2.9e-10
WP_072589349.1|2270205_2270295_+	YjcZ family sporulation protein	NA	NA	NA	NA	NA
WP_007612304.1|2270383_2270905_+	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_003153374.1|2270849_2271065_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015240122.1|2270970_2271345_-	GNAT family N-acetyltransferase RibT	NA	NA	NA	NA	NA
WP_015240123.1|2271461_2271926_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	58.7	1.6e-43
WP_015240124.1|2271958_2273155_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	54.9	3.7e-116
WP_007409425.1|2273169_2273817_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	44.3	1.5e-39
WP_025284946.1|2273797_2274913_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	36.6	7.5e-55
>prophage 6
NZ_CP007244	Bacillus amyloliquefaciens subsp. plantarum TrigoCor1448, complete genome	3957904	3644313	3696317	3957904	coat,lysis,holin	Bacillus_phage(36.36%)	57	NA	NA
WP_025285443.1|3644313_3645249_-	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	28.9	2.8e-23
WP_012118715.1|3645250_3645949_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.4	9.2e-35
WP_025285444.1|3646140_3647007_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_025285445.1|3647027_3647732_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_025285446.1|3647796_3648723_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	45.9	1.1e-43
WP_015240798.1|3649072_3649528_-	protein SpsL	NA	NA	NA	NA	NA
WP_007407683.1|3649524_3650373_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	37.3	4.1e-37
WP_007407684.1|3650393_3651341_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	42.9	5.9e-69
WP_012118722.1|3651343_3652081_-	NTP transferase domain-containing protein	NA	G3MA50	Bacillus_virus	42.3	6.5e-47
WP_025285447.1|3652108_3653113_-|coat	spore coat protein	coat	NA	NA	NA	NA
WP_025285448.1|3653114_3653855_-|coat	spore coat protein	coat	NA	NA	NA	NA
WP_012118725.1|3653847_3654969_-|coat	spore coat protein	coat	NA	NA	NA	NA
WP_025285449.1|3654968_3655832_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_025285450.1|3655832_3657002_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A1D8KU11	Synechococcus_phage	27.2	2.7e-15
WP_025285451.1|3657024_3658449_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA	NA
WP_003150972.1|3658453_3659224_-	glycosyltransferase family 2 protein	NA	A0A0F7L2F7	uncultured_marine_virus	26.3	4.4e-06
WP_007407693.1|3659504_3660056_+|coat	spore coat protein GerQ	coat	NA	NA	NA	NA
WP_012118729.1|3660103_3660475_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_025285452.1|3660538_3661858_-	purine permease	NA	NA	NA	NA	NA
WP_015387535.1|3661876_3662299_-	YwdI family protein	NA	NA	NA	NA	NA
WP_025285453.1|3662359_3663043_-	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	44.7	4.2e-48
WP_015418477.1|3663057_3663864_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_025285454.1|3663948_3664476_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025285455.1|3664520_3665156_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003150960.1|3665148_3665487_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_025285456.1|3665636_3666449_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_007407702.1|3666480_3666720_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025285457.1|3666819_3668259_-	sucrose-6-phosphate hydrolase	NA	F8WPR5	Bacillus_phage	25.3	7.0e-21
WP_020958006.1|3668255_3669638_-	PTS sucrose transporter subunit IIBC	NA	NA	NA	NA	NA
WP_007407705.1|3669856_3670687_-	transcription antiterminator	NA	NA	NA	NA	NA
WP_025285458.1|3670710_3671025_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025285459.1|3671550_3673962_+	S8 family serine peptidase	NA	A0A217EQY2	Bacillus_phage	36.8	3.8e-19
WP_025285460.1|3674003_3675005_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_007407708.1|3676455_3677205_-	oxygen-insensitive NADPH nitroreductase	NA	NA	NA	NA	NA
WP_007407709.1|3677307_3678495_-	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA	NA
WP_025285462.1|3678696_3679155_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003150937.1|3679447_3679708_+	spore morphogenesis/germination protein YwcE	NA	NA	NA	NA	NA
WP_007614576.1|3679751_3680120_-	cytochrome aa3 quinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003150930.1|3680121_3680736_-	cytochrome aa3 quinol oxidase subunit III	NA	NA	NA	NA	NA
WP_012118743.1|3680750_3682700_-	cytochrome aa3 quinol oxidase subunit I	NA	NA	NA	NA	NA
WP_007614580.1|3682727_3683684_-	cytochrome aa3 quinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003150926.1|3684195_3684441_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_025285463.1|3684458_3686000_-	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_007407714.1|3685989_3687174_-	galactokinase	NA	NA	NA	NA	NA
WP_025285464.1|3687225_3687633_-	GtrA family protein	NA	NA	NA	NA	NA
WP_015240820.1|3687691_3688315_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003150917.1|3688650_3688812_+	DNA-binding anti-repressor SinI	NA	NA	NA	NA	NA
WP_025285465.1|3689028_3689709_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_025285466.1|3689708_3690383_+	streptomycin biosynthesis protein StrF	NA	NA	NA	NA	NA
WP_012118748.1|3690403_3691006_-	DsbA family oxidoreductase	NA	NA	NA	NA	NA
WP_025285467.1|3691091_3692348_-	deferrochelatase/peroxidase EfeB	NA	NA	NA	NA	NA
WP_025285468.1|3692366_3692561_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025285469.1|3692761_3693436_-	thiamine phosphate synthase	NA	NA	NA	NA	NA
WP_003150909.1|3693432_3694251_-	hydroxyethylthiazole kinase	NA	NA	NA	NA	NA
WP_003150908.1|3694253_3695162_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007407725.1|3695268_3695655_+|holin	CidA/LrgA family holin-like protein	holin	NA	NA	NA	NA
WP_012118753.1|3695636_3696317_+|lysis	CidB/LrgB family autolysis modulator	lysis	NA	NA	NA	NA
