assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000572175.1_ASM57217v1	NZ_CP002883	Mycobacterium tuberculosis BT1 chromosome, complete genome	1	364925-365623	1	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	33	2	2	365213-365254|365288-365320	NZ_CP002883.1_373229-373270|NZ_CP002883.1_372044-372076	NA	10	10	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|101aa|up_4|NZ_CP002883.1_361937_362240_+,NA|161aa|down_1|NZ_CP002883.1_375018_375501_-,NA|410aa|down_5|NZ_CP002883.1_377617_378847_+	NA|262aa|up_9|NZ_CP002883.1_356632_357418_+	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|268aa|up_8|NZ_CP002883.1_357406_358210_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|up_7|NZ_CP002883.1_358219_359617_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|592aa|up_6|NZ_CP002883.1_359795_361571_+	pfam00934, PE, PE family	NA|76aa|up_5|NZ_CP002883.1_361713_361941_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|101aa|up_4|NZ_CP002883.1_361937_362240_+	NA	NA|74aa|up_3|NZ_CP002883.1_362287_362509_+	PHA01748, PHA01748, hypothetical protein	NA|142aa|up_2|NZ_CP002883.1_362505_362931_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|211aa|up_1|NZ_CP002883.1_363066_363699_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|303aa|up_0|NZ_CP002883.1_363695_364604_+	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|224aa|down_0|NZ_CP002883.1_374359_375031_+	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|161aa|down_1|NZ_CP002883.1_375018_375501_-	NA	NA|239aa|down_2|NZ_CP002883.1_375558_376275_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|219aa|down_3|NZ_CP002883.1_376376_377033_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NZ_CP002883.1_377102_377594_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|410aa|down_5|NZ_CP002883.1_377617_378847_+	NA	NA|621aa|down_6|NZ_CP002883.1_379001_380864_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|129aa|down_7|NZ_CP002883.1_380935_381322_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|212aa|down_8|NZ_CP002883.1_381324_381960_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|295aa|down_9|NZ_CP002883.1_382047_382932_+	COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
GCF_000572175.1_ASM57217v1	NZ_CP002883	Mycobacterium tuberculosis BT1 chromosome, complete genome	2	690585-690661	2	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	TGAGGTGCGGCGTGAGCGCGGGT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|136aa|up_9|NZ_CP002883.1_676480_676888_+	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|229aa|up_8|NZ_CP002883.1_676947_677634_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|878aa|up_7|NZ_CP002883.1_677787_680421_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|796aa|up_6|NZ_CP002883.1_680443_682831_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|241aa|up_5|NZ_CP002883.1_682968_683691_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|266aa|up_4|NZ_CP002883.1_683687_684485_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|296aa|up_3|NZ_CP002883.1_684486_685374_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|405aa|up_2|NZ_CP002883.1_685379_686594_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|344aa|up_1|NZ_CP002883.1_686590_687622_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|482aa|up_0|NZ_CP002883.1_687618_689064_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|517aa|down_0|NZ_CP002883.1_691796_693347_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|131aa|down_1|NZ_CP002883.1_693398_693791_-	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|86aa|down_2|NZ_CP002883.1_693787_694045_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|412aa|down_3|NZ_CP002883.1_694227_695463_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|138aa|down_4|NZ_CP002883.1_695713_696127_-	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|79aa|down_5|NZ_CP002883.1_696123_696360_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|169aa|down_6|NZ_CP002883.1_696463_696970_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|177aa|down_7|NZ_CP002883.1_697083_697614_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|254aa|down_8|NZ_CP002883.1_697597_698359_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|104aa|down_9|NZ_CP002883.1_698415_698727_+	pfam03413, PepSY, Peptidase propeptide and YPEB domain
GCF_000572175.1_ASM57217v1	NZ_CP002883	Mycobacterium tuberculosis BT1 chromosome, complete genome	3	1489546-1489665	1	PILER-CR	no	DinG	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Type IV-A	AACCCGCCGGTGCCGCCGGCACCGCCGGCG	30	1	1	1489576-1489594	NZ_CP002883.1_398046-398064	NA	2	2	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|99aa|up_3|NZ_CP002883.1_1485437_1485734_+,NA	NA|497aa|up_9|NZ_CP002883.1_1476409_1477900_-	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair]	NA|542aa|up_8|NZ_CP002883.1_1477980_1479606_-	cd07302, CHD, cyclase homology domain	NA|533aa|up_7|NZ_CP002883.1_1479675_1481274_-	COG2114, CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms]	NA|559aa|up_6|NZ_CP002883.1_1481280_1482957_-	COG2114, CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms]	NA|568aa|up_5|NZ_CP002883.1_1482969_1484673_-	COG2114, CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms]	NA|224aa|up_4|NZ_CP002883.1_1484743_1485415_+	PRK03298, PRK03298, endonuclease NucS	NA|99aa|up_3|NZ_CP002883.1_1485437_1485734_+	NA	NA|153aa|up_2|NZ_CP002883.1_1485768_1486227_-	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	NA|394aa|up_1|NZ_CP002883.1_1486305_1487487_+	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|305aa|up_0|NZ_CP002883.1_1487616_1488531_+	COG3118, COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones]	NA|732aa|down_0|NZ_CP002883.1_1490648_1492844_-	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|702aa|down_1|NZ_CP002883.1_1492851_1494957_-	cd11344, AmyAc_GlgE_like, Alpha amylase catalytic domain found in GlgE-like proteins	NA|864aa|down_2|NZ_CP002883.1_1495095_1497687_+	cd04299, GT35_Glycogen_Phosphorylase-like, proteins similar to glycogen phosphorylase	DinG|665aa|down_3|NZ_CP002883.1_1497726_1499721_-	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|449aa|down_4|NZ_CP002883.1_1499744_1501091_-	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated	NA|102aa|down_5|NZ_CP002883.1_1501192_1501498_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|197aa|down_6|NZ_CP002883.1_1501523_1502114_+	pfam09438, DUF2017, Domain of unknown function (DUF2017)	NA|345aa|down_7|NZ_CP002883.1_1502130_1503165_+	COG3191, DmpA, L-aminopeptidase/D-esterase [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|147aa|down_8|NZ_CP002883.1_1503172_1503613_+	cd08070, MPN_like, Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding)	NA|94aa|down_9|NZ_CP002883.1_1503634_1503916_+	cd17074, Ubl_CysO_like, ubiquitin-like (Ubl) domain found in Mycobacterium tuberculosis CysO and similar proteins
GCF_000572175.1_ASM57217v1	NZ_CP002883	Mycobacterium tuberculosis BT1 chromosome, complete genome	4	1573729-1573929	3	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	32	0	0	NA	NA	NA	3	3	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|106aa|up_7|NZ_CP002883.1_1565492_1565810_+,NA	NA|103aa|up_9|NZ_CP002883.1_1563007_1563316_+	pfam00934, PE, PE family	NA|540aa|up_8|NZ_CP002883.1_1563312_1564932_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|106aa|up_7|NZ_CP002883.1_1565492_1565810_+	NA	NA|209aa|up_6|NZ_CP002883.1_1565944_1566571_+	PRK00300, gmk, guanylate kinase; Provisional	NA|111aa|up_5|NZ_CP002883.1_1566636_1566969_+	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit	NA|419aa|up_4|NZ_CP002883.1_1566984_1568241_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|404aa|up_3|NZ_CP002883.1_1568368_1569580_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|493aa|up_2|NZ_CP002883.1_1569652_1571131_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|462aa|up_1|NZ_CP002883.1_1571127_1572513_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|345aa|up_0|NZ_CP002883.1_1572590_1573625_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|134aa|down_0|NZ_CP002883.1_1575655_1576057_-	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|86aa|down_1|NZ_CP002883.1_1576053_1576311_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|320aa|down_2|NZ_CP002883.1_1576393_1577353_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|321aa|down_3|NZ_CP002883.1_1577377_1578340_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|246aa|down_4|NZ_CP002883.1_1578338_1579076_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|656aa|down_5|NZ_CP002883.1_1579156_1581124_+	PRK14873, PRK14873, primosomal protein N'	NA|275aa|down_6|NZ_CP002883.1_1581141_1581966_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|161aa|down_7|NZ_CP002883.1_1582134_1582617_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|down_8|NZ_CP002883.1_1582688_1583513_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|313aa|down_9|NZ_CP002883.1_1583709_1584648_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed
GCF_000572175.1_ASM57217v1	NZ_CP002883	Mycobacterium tuberculosis BT1 chromosome, complete genome	5	1574017-1574801	4	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	32	0	0	NA	NA	NA	10	10	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|106aa|up_7|NZ_CP002883.1_1565492_1565810_+,NA	NA|103aa|up_9|NZ_CP002883.1_1563007_1563316_+	pfam00934, PE, PE family	NA|540aa|up_8|NZ_CP002883.1_1563312_1564932_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|106aa|up_7|NZ_CP002883.1_1565492_1565810_+	NA	NA|209aa|up_6|NZ_CP002883.1_1565944_1566571_+	PRK00300, gmk, guanylate kinase; Provisional	NA|111aa|up_5|NZ_CP002883.1_1566636_1566969_+	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit	NA|419aa|up_4|NZ_CP002883.1_1566984_1568241_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|404aa|up_3|NZ_CP002883.1_1568368_1569580_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|493aa|up_2|NZ_CP002883.1_1569652_1571131_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|462aa|up_1|NZ_CP002883.1_1571127_1572513_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|345aa|up_0|NZ_CP002883.1_1572590_1573625_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|134aa|down_0|NZ_CP002883.1_1575655_1576057_-	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|86aa|down_1|NZ_CP002883.1_1576053_1576311_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|320aa|down_2|NZ_CP002883.1_1576393_1577353_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|321aa|down_3|NZ_CP002883.1_1577377_1578340_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|246aa|down_4|NZ_CP002883.1_1578338_1579076_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|656aa|down_5|NZ_CP002883.1_1579156_1581124_+	PRK14873, PRK14873, primosomal protein N'	NA|275aa|down_6|NZ_CP002883.1_1581141_1581966_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|161aa|down_7|NZ_CP002883.1_1582134_1582617_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|down_8|NZ_CP002883.1_1582688_1583513_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|313aa|down_9|NZ_CP002883.1_1583709_1584648_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed
GCF_000572175.1_ASM57217v1	NZ_CP002883	Mycobacterium tuberculosis BT1 chromosome, complete genome	6	1638159-1638385	2	PILER-CR	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CGGCGGCGCCGTTGGCGCCGTTGCCGCCGGCGCCGCCGTTGCCGCCG	47	0	0	NA	NA	NA	2	2	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|38aa|up_6|NZ_CP002883.1_1623466_1623580_-,NA|137aa|up_5|NZ_CP002883.1_1623629_1624040_-,NA|288aa|down_2|NZ_CP002883.1_1642211_1643075_+	NA|78aa|up_9|NZ_CP002883.1_1619401_1619635_+	PRK06870, secG, preprotein translocase subunit SecG; Reviewed	NA|767aa|up_8|NZ_CP002883.1_1620133_1622434_+	TIGR00509, Trimethylamine-N-oxide_reductase_1, molybdopterin guanine dinucleotide-containing S/N-oxide reductases	NA|155aa|up_7|NZ_CP002883.1_1622549_1623014_-	cd07820, SRPBCC_3, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|38aa|up_6|NZ_CP002883.1_1623466_1623580_-	NA	NA|137aa|up_5|NZ_CP002883.1_1623629_1624040_-	NA	NA|248aa|up_4|NZ_CP002883.1_1624056_1624800_-	pfam01182, Glucosamine_iso, Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	NA|305aa|up_3|NZ_CP002883.1_1624796_1625711_-	TIGR00534, Putative_OxPP_cycle_protein_OpcA, glucose-6-phosphate dehydrogenase assembly protein OpcA	NA|374aa|up_2|NZ_CP002883.1_1627303_1628425_-	PRK03343, PRK03343, transaldolase; Validated	NA|701aa|up_1|NZ_CP002883.1_1628441_1630544_-	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|309aa|up_0|NZ_CP002883.1_1635986_1636913_+	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional	NA|422aa|down_0|NZ_CP002883.1_1639912_1641178_+	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|329aa|down_1|NZ_CP002883.1_1641205_1642192_-	cd05286, QOR2, Quinone oxidoreductase (QOR)	NA|288aa|down_2|NZ_CP002883.1_1642211_1643075_+	NA	NA|311aa|down_3|NZ_CP002883.1_1643024_1643957_-	COG1612, CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]	NA|262aa|down_4|NZ_CP002883.1_1644068_1644854_-	TIGR00025, Mtu_efflux, ABC transporter efflux protein, DrrB family	NA|314aa|down_5|NZ_CP002883.1_1644850_1645792_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|592aa|down_6|NZ_CP002883.1_1645947_1647723_-	TIGR03459, crt_membr, carotene biosynthesis associated membrane protein	NA|269aa|down_7|NZ_CP002883.1_1647770_1648577_+	COG2345, COG2345, Predicted transcriptional regulator [Transcription]	NA|847aa|down_8|NZ_CP002883.1_1648573_1651114_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|398aa|down_9|NZ_CP002883.1_1651110_1652304_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]
GCF_000572175.1_ASM57217v1	NZ_CP002883	Mycobacterium tuberculosis BT1 chromosome, complete genome	7	2071530-2071784	1	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCNCCGTCGCCGCCNNTGCC	21	2	3	2071611-2071628|2071611-2071628|2071701-2071718	NZ_CP002883.1_399525-399508|NZ_CP002883.1_605732-605715|NZ_CP002883.1_3434008-3433991	NA	5	5	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|88aa|up_0|NZ_CP002883.1_2070888_2071152_-,NA	NA|165aa|up_9|NZ_CP002883.1_2057238_2057733_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|211aa|up_8|NZ_CP002883.1_2058125_2058758_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|942aa|up_7|NZ_CP002883.1_2059116_2061942_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|287aa|up_6|NZ_CP002883.1_2062168_2063029_-	PRK03204, PRK03204, haloalkane dehalogenase; Provisional	NA|289aa|up_5|NZ_CP002883.1_2063069_2063936_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|629aa|up_4|NZ_CP002883.1_2063940_2065827_-	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c	NA|678aa|up_3|NZ_CP002883.1_2065842_2067876_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|742aa|up_2|NZ_CP002883.1_2067995_2070221_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|132aa|up_1|NZ_CP002883.1_2070496_2070892_-	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|88aa|up_0|NZ_CP002883.1_2070888_2071152_-	NA	NA|346aa|down_0|NZ_CP002883.1_2072921_2073959_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|456aa|down_1|NZ_CP002883.1_2073958_2075326_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|480aa|down_2|NZ_CP002883.1_2075499_2076939_-	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein	NA|484aa|down_3|NZ_CP002883.1_2076971_2078423_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|317aa|down_4|NZ_CP002883.1_2078452_2079403_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|139aa|down_5|NZ_CP002883.1_2079417_2079834_-	COG3682, COG3682, Predicted transcriptional regulator [Transcription]	NA|141aa|down_6|NZ_CP002883.1_2080111_2080534_+	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|101aa|down_7|NZ_CP002883.1_2080582_2080885_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|105aa|down_8|NZ_CP002883.1_2080881_2081196_+	PRK13202, ureB, urease subunit beta; Reviewed	NA|578aa|down_9|NZ_CP002883.1_2081195_2082929_+	PRK13206, ureC, urease subunit alpha; Reviewed
GCF_000572175.1_ASM57217v1	NZ_CP002883	Mycobacterium tuberculosis BT1 chromosome, complete genome	8	2154690-2154909	5	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	49	0	0	NA	NA	NA	1	1	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_2|NZ_CP002883.1_2143225_2143633_-,NA|127aa|down_5|NZ_CP002883.1_2162425_2162806_-	NA|155aa|up_9|NZ_CP002883.1_2136539_2137004_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|741aa|up_8|NZ_CP002883.1_2137193_2139416_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_7|NZ_CP002883.1_2139453_2139897_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_6|NZ_CP002883.1_2140010_2140604_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_5|NZ_CP002883.1_2140686_2141292_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_4|NZ_CP002883.1_2141391_2142396_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_3|NZ_CP002883.1_2142495_2143248_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_2|NZ_CP002883.1_2143225_2143633_-	NA	NA|767aa|up_1|NZ_CP002883.1_2143767_2146068_+	PLN02892, PLN02892, isocitrate lyase	NA|421aa|up_0|NZ_CP002883.1_2150266_2151528_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|155aa|down_0|NZ_CP002883.1_2156936_2157401_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_1|NZ_CP002883.1_2157498_2158362_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_2|NZ_CP002883.1_2158399_2159671_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_3|NZ_CP002883.1_2159942_2161058_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_4|NZ_CP002883.1_2161048_2162389_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_5|NZ_CP002883.1_2162425_2162806_-	NA	NA|621aa|down_6|NZ_CP002883.1_2162962_2164825_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_7|NZ_CP002883.1_2164832_2165312_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_8|NZ_CP002883.1_2165548_2166322_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|256aa|down_9|NZ_CP002883.1_2166325_2167093_-	PRK05867, PRK05867, SDR family oxidoreductase
GCF_000572175.1_ASM57217v1	NZ_CP002883	Mycobacterium tuberculosis BT1 chromosome, complete genome	9	3107569-3108716	3,6,2	PILER-CR,CRISPRCasFinder,CRT	no	c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Type III-D,Type III-C,Type III-B,Type III-A	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	14,14,15	15	TypeIII-D,TypeIII-C,TypeIII-B,TypeIII-A	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_7|NZ_CP002883.1_3100848_3101103_-,NA|135aa|up_6|NZ_CP002883.1_3101250_3101655_+,NA|64aa|up_5|NZ_CP002883.1_3101651_3101843_+,NA|86aa|up_4|NZ_CP002883.1_3103429_3103687_+,NA|104aa|up_3|NZ_CP002883.1_3103791_3104103_+,NA|203aa|up_2|NZ_CP002883.1_3104522_3105131_+,NA	NA|348aa|up_9|NZ_CP002883.1_3099163_3100207_-	COG5586, COG5586, Uncharacterized conserved protein [Function unknown]	NA|92aa|up_8|NZ_CP002883.1_3100397_3100673_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_7|NZ_CP002883.1_3100848_3101103_-	NA	NA|135aa|up_6|NZ_CP002883.1_3101250_3101655_+	NA	NA|64aa|up_5|NZ_CP002883.1_3101651_3101843_+	NA	NA|86aa|up_4|NZ_CP002883.1_3103429_3103687_+	NA	NA|104aa|up_3|NZ_CP002883.1_3103791_3104103_+	NA	NA|203aa|up_2|NZ_CP002883.1_3104522_3105131_+	NA	NA|470aa|up_1|NZ_CP002883.1_3105201_3106611_+	pfam00665, rve, Integrase core domain	NA|271aa|up_0|NZ_CP002883.1_3106607_3107420_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|down_0|NZ_CP002883.1_3108747_3110009_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	csm3gr7|237aa|down_1|NZ_CP002883.1_3110372_3111083_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_2|NZ_CP002883.1_3111092_3111467_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_3|NZ_CP002883.1_3111463_3113902_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|263aa|down_4|NZ_CP002883.1_3113898_3114687_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|182aa|down_5|NZ_CP002883.1_3115020_3115566_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]	NA|295aa|down_6|NZ_CP002883.1_3115837_3116722_-	COG2253, COG2253, Uncharacterized conserved protein [Function unknown]	NA|296aa|down_7|NZ_CP002883.1_3116724_3117612_-	pfam09407, AbiEi_1, AbiEi antitoxin C-terminal domain	NA|182aa|down_8|NZ_CP002883.1_3117916_3118462_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]	NA|90aa|down_9|NZ_CP002883.1_3118458_3118728_-	COG5552, COG5552, Uncharacterized conserved protein [Function unknown]
GCF_000572175.1_ASM57217v1	NZ_CP002883	Mycobacterium tuberculosis BT1 chromosome, complete genome	10	3650092-3650237	7	CRISPRCasFinder	no	cas3	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Unclear	GACGGGAACGAGACGAACAATCCGGCCCCTGTGA	34	0	0	NA	NA	NA	1	1	Unclear	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA|104aa|down_6|NZ_CP002883.1_3655827_3656139_-,NA|126aa|down_7|NZ_CP002883.1_3656275_3656653_-	NA|223aa|up_9|NZ_CP002883.1_3639006_3639675_-	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|395aa|up_8|NZ_CP002883.1_3639775_3640960_+	pfam02515, CoA_transf_3, CoA-transferase family III	NA|757aa|up_7|NZ_CP002883.1_3640988_3643259_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|390aa|up_6|NZ_CP002883.1_3643247_3644417_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|175aa|up_5|NZ_CP002883.1_3644441_3644966_-	PLN02948, PLN02948, phosphoribosylaminoimidazole carboxylase	NA|430aa|up_4|NZ_CP002883.1_3644962_3646252_-	TIGR01161, N5-carboxyaminoimidazole_ribonucleotide_synthase, phosphoribosylaminoimidazole carboxylase, PurK protein	NA|224aa|up_3|NZ_CP002883.1_3646352_3647024_+	COG2246, COG2246, Predicted membrane protein [Function unknown]	NA|173aa|up_2|NZ_CP002883.1_3646978_3647497_-	pfam03703, bPH_2, Bacterial PH domain	NA|267aa|up_1|NZ_CP002883.1_3647539_3648340_-	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism]	NA|549aa|up_0|NZ_CP002883.1_3648389_3650036_+	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	NA|223aa|down_0|NZ_CP002883.1_3650460_3651129_+	PRK00148, PRK00148, Maf-like protein; Reviewed	NA|298aa|down_1|NZ_CP002883.1_3651169_3652063_+	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|144aa|down_2|NZ_CP002883.1_3652059_3652491_+	COG2166, sufE, Cysteine desulfurase SufE subunit [Posttranslational modification, protein turnover, chaperones]	NA|601aa|down_3|NZ_CP002883.1_3652598_3654401_+	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]	NA|262aa|down_4|NZ_CP002883.1_3654410_3655196_-	PRK07122, PRK07122, RNA polymerase sigma factor SigF; Reviewed	NA|146aa|down_5|NZ_CP002883.1_3655192_3655630_-	COG2172, RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms]	NA|104aa|down_6|NZ_CP002883.1_3655827_3656139_-	NA	NA|126aa|down_7|NZ_CP002883.1_3656275_3656653_-	NA	NA|450aa|down_8|NZ_CP002883.1_3656686_3658036_-	PRK08297, PRK08297, L-lysine aminotransferase; Provisional	NA|151aa|down_9|NZ_CP002883.1_3658086_3658539_-	smart00344, HTH_ASNC, helix_turn_helix ASNC type
GCF_000572175.1_ASM57217v1	NZ_CP002883	Mycobacterium tuberculosis BT1 chromosome, complete genome	11	3730823-3731493	3	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGNNGCCNCCGTNGCCGCC	23	0	0	NA	NA	NA	9	9	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA|96aa|down_4|NZ_CP002883.1_3745543_3745831_-	NA|147aa|up_9|NZ_CP002883.1_3711356_3711797_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|290aa|up_8|NZ_CP002883.1_3711830_3712700_-	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|337aa|up_7|NZ_CP002883.1_3712720_3713731_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|215aa|up_6|NZ_CP002883.1_3714003_3714648_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|410aa|up_5|NZ_CP002883.1_3714714_3715944_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_4|NZ_CP002883.1_3716226_3717576_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_3|NZ_CP002883.1_3717587_3718727_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_2|NZ_CP002883.1_3718723_3719455_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|2538aa|up_1|NZ_CP002883.1_3719463_3727077_-	pfam00823, PPE, PPE family	NA|327aa|up_0|NZ_CP002883.1_3727125_3728106_-	pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal	NA|86aa|down_0|NZ_CP002883.1_3733413_3733671_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|down_1|NZ_CP002883.1_3733926_3743400_-	pfam00823, PPE, PPE family	NA|149aa|down_2|NZ_CP002883.1_3744025_3744472_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|down_3|NZ_CP002883.1_3744508_3745249_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|down_4|NZ_CP002883.1_3745543_3745831_-	NA	NA|130aa|down_5|NZ_CP002883.1_3759325_3759715_+	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|98aa|down_6|NZ_CP002883.1_3759728_3760022_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|282aa|down_7|NZ_CP002883.1_3760018_3760864_-	PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	NA|92aa|down_8|NZ_CP002883.1_3760987_3761263_+	COG2161, StbD, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|86aa|down_9|NZ_CP002883.1_3761259_3761517_+	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system
GCF_000572175.1_ASM57217v1	NZ_CP002883	Mycobacterium tuberculosis BT1 chromosome, complete genome	12	3839551-3839640	8	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCAGGCGTTGGGCTGGCTGCCGAT	24	0	0	NA	NA	NA	1	1	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|77aa|up_6|NZ_CP002883.1_3831587_3831818_+,NA|121aa|up_5|NZ_CP002883.1_3831921_3832284_-,NA|121aa|down_0|NZ_CP002883.1_3840625_3840988_-,NA|52aa|down_2|NZ_CP002883.1_3842829_3842985_-,NA|52aa|down_3|NZ_CP002883.1_3843009_3843165_-,NA|238aa|down_6|NZ_CP002883.1_3847200_3847914_-	NA|212aa|up_9|NZ_CP002883.1_3829266_3829902_-	COG1214, COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|169aa|up_8|NZ_CP002883.1_3829898_3830405_-	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only]	NA|387aa|up_7|NZ_CP002883.1_3830401_3831562_-	PRK00053, alr, alanine racemase; Reviewed	NA|77aa|up_6|NZ_CP002883.1_3831587_3831818_+	NA	NA|121aa|up_5|NZ_CP002883.1_3831921_3832284_-	NA	NA|177aa|up_4|NZ_CP002883.1_3833242_3833773_+	pfam00823, PPE, PPE family	NA|252aa|up_3|NZ_CP002883.1_3834090_3834846_-	COG1484, DnaC, DNA replication protein [DNA replication, recombination, and repair]	NA|421aa|up_2|NZ_CP002883.1_3834929_3836191_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|100aa|up_1|NZ_CP002883.1_3838329_3838629_+	pfam00934, PE, PE family	NA|181aa|up_0|NZ_CP002883.1_3838714_3839257_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|121aa|down_0|NZ_CP002883.1_3840625_3840988_-	NA	NA|179aa|down_1|NZ_CP002883.1_3841150_3841687_+	pfam00823, PPE, PPE family	NA|52aa|down_2|NZ_CP002883.1_3842829_3842985_-	NA	NA|52aa|down_3|NZ_CP002883.1_3843009_3843165_-	NA	NA|461aa|down_4|NZ_CP002883.1_3844357_3845740_-	TIGR01788, Glutamate_decarboxylase_alpha_GAD-alpha	NA|474aa|down_5|NZ_CP002883.1_3845777_3847199_-	pfam01256, Carb_kinase, Carbohydrate kinase	NA|238aa|down_6|NZ_CP002883.1_3847200_3847914_-	NA	NA|285aa|down_7|NZ_CP002883.1_3847924_3848779_-	pfam14494, DUF4436, Domain of unknown function (DUF4436)	NA|625aa|down_8|NZ_CP002883.1_3849000_3850875_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|159aa|down_9|NZ_CP002883.1_3850896_3851373_+	pfam10708, DUF2510, Protein of unknown function (DUF2510)
GCF_000572175.1_ASM57217v1	NZ_CP002883	Mycobacterium tuberculosis BT1 chromosome, complete genome	13	4098647-4098735	9	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCTCGGCGACGATGCGGGCCGGATGACGGCC	31	0	0	NA	NA	NA	1	1	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|257aa|up_6|NZ_CP002883.1_4089233_4090004_-,NA|233aa|up_0|NZ_CP002883.1_4097751_4098450_-,NA|126aa|down_6|NZ_CP002883.1_4103970_4104348_+	NA|388aa|up_9|NZ_CP002883.1_4084904_4086068_-	TIGR03819, heli_sec_ATPase, helicase/secretion neighborhood ATPase	NA|351aa|up_8|NZ_CP002883.1_4086064_4087117_-	TIGR03815, CpaE_hom_Actino, helicase/secretion neighborhood CpaE-like protein	NA|288aa|up_7|NZ_CP002883.1_4087615_4088479_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|257aa|up_6|NZ_CP002883.1_4089233_4090004_-	NA	NA|549aa|up_5|NZ_CP002883.1_4090000_4091647_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|288aa|up_4|NZ_CP002883.1_4091643_4092507_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|up_3|NZ_CP002883.1_4092499_4093426_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|up_2|NZ_CP002883.1_4093427_4095053_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|652aa|up_1|NZ_CP002883.1_4095760_4097716_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|233aa|up_0|NZ_CP002883.1_4097751_4098450_-	NA	NA|173aa|down_0|NZ_CP002883.1_4098795_4099314_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|328aa|down_1|NZ_CP002883.1_4099314_4100298_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_2|NZ_CP002883.1_4100290_4101484_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|274aa|down_3|NZ_CP002883.1_4101489_4102311_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|216aa|down_4|NZ_CP002883.1_4102442_4103090_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|246aa|down_5|NZ_CP002883.1_4103125_4103863_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|126aa|down_6|NZ_CP002883.1_4103970_4104348_+	NA	NA|225aa|down_7|NZ_CP002883.1_4104446_4105121_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|265aa|down_8|NZ_CP002883.1_4105226_4106021_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|152aa|down_9|NZ_CP002883.1_4106027_4106483_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
