assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000572155.1_ASM57215v1	NZ_CP002882	Mycobacterium tuberculosis BT2 chromosome, complete genome	1	364928-365626	1	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	33	2	2	365216-365257|365291-365323	NZ_CP002882.1_373232-373273|NZ_CP002882.1_372047-372079	NA	10	10	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|101aa|up_4|NZ_CP002882.1_361940_362243_+,NA|161aa|down_1|NZ_CP002882.1_375021_375504_-,NA|410aa|down_5|NZ_CP002882.1_377620_378850_+	NA|262aa|up_9|NZ_CP002882.1_356635_357421_+	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|268aa|up_8|NZ_CP002882.1_357409_358213_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|up_7|NZ_CP002882.1_358222_359620_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|592aa|up_6|NZ_CP002882.1_359798_361574_+	pfam00934, PE, PE family	NA|76aa|up_5|NZ_CP002882.1_361716_361944_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|101aa|up_4|NZ_CP002882.1_361940_362243_+	NA	NA|74aa|up_3|NZ_CP002882.1_362290_362512_+	PHA01748, PHA01748, hypothetical protein	NA|142aa|up_2|NZ_CP002882.1_362508_362934_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|211aa|up_1|NZ_CP002882.1_363069_363702_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|303aa|up_0|NZ_CP002882.1_363698_364607_+	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|224aa|down_0|NZ_CP002882.1_374362_375034_+	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|161aa|down_1|NZ_CP002882.1_375021_375504_-	NA	NA|239aa|down_2|NZ_CP002882.1_375561_376278_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|219aa|down_3|NZ_CP002882.1_376379_377036_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NZ_CP002882.1_377105_377597_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|410aa|down_5|NZ_CP002882.1_377620_378850_+	NA	NA|621aa|down_6|NZ_CP002882.1_379004_380867_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|129aa|down_7|NZ_CP002882.1_380938_381325_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|212aa|down_8|NZ_CP002882.1_381327_381963_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|295aa|down_9|NZ_CP002882.1_382050_382935_+	COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
GCF_000572155.1_ASM57215v1	NZ_CP002882	Mycobacterium tuberculosis BT2 chromosome, complete genome	2	629740-629877	1	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGACCACGCCGGTG	18	2	3	629758-629775|629758-629775|629842-629859	NZ_CP002882.1_23824-23841|NZ_CP002882.1_1413562-1413579|NZ_CP002882.1_971943-971960	NA	3	3	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|54aa|up_7|NZ_CP002882.1_620503_620665_-,NA|478aa|up_0|NZ_CP002882.1_626755_628189_-,NA|450aa|down_2|NZ_CP002882.1_631512_632862_-,NA|93aa|down_5|NZ_CP002882.1_634392_634671_-	NA|325aa|up_9|NZ_CP002882.1_618273_619248_+	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB	NA|406aa|up_8|NZ_CP002882.1_619289_620507_+	COG0455, flhG, Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility]	NA|54aa|up_7|NZ_CP002882.1_620503_620665_-	NA	NA|106aa|up_6|NZ_CP002882.1_620711_621029_+	pfam14012, DUF4229, Protein of unknown function (DUF4229)	NA|620aa|up_5|NZ_CP002882.1_621175_623035_+	pfam00934, PE, PE family	NA|336aa|up_4|NZ_CP002882.1_622930_623938_-	TIGR00747, 3-oxoacyl-_synthase_3, 3-oxoacyl-(acyl-carrier-protein) synthase III	NA|293aa|up_3|NZ_CP002882.1_624019_624898_-	TIGR00751, 14-dihydroxy-2-naphthoate_octaprenyltransferase, 1,4-dihydroxy-2-naphthoate octaprenyltransferase	NA|265aa|up_2|NZ_CP002882.1_624914_625709_+	PRK07823, PRK07823, S-methyl-5'-thioadenosine phosphorylase	NA|347aa|up_1|NZ_CP002882.1_625705_626746_+	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|478aa|up_0|NZ_CP002882.1_626755_628189_-	NA	NA|219aa|down_0|NZ_CP002882.1_630176_630833_+	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|221aa|down_1|NZ_CP002882.1_630829_631492_+	COG3222, COG3222, Uncharacterized protein conserved in bacteria [Function unknown]	NA|450aa|down_2|NZ_CP002882.1_631512_632862_-	NA	NA|381aa|down_3|NZ_CP002882.1_632873_634016_-	PRK07824, PRK07824, o-succinylbenzoate--CoA ligase	NA|101aa|down_4|NZ_CP002882.1_634030_634333_-	pfam11829, DUF3349, Protein of unknown function (DUF3349)	NA|93aa|down_5|NZ_CP002882.1_634392_634671_-	NA	NA|418aa|down_6|NZ_CP002882.1_634667_635921_-	COG0306, PitA, Phosphate/sulphate permeases [Inorganic ion transport and metabolism]	NA|129aa|down_7|NZ_CP002882.1_636040_636427_-	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|295aa|down_8|NZ_CP002882.1_636489_637374_-	PRK05866, PRK05866, SDR family oxidoreductase	NA|301aa|down_9|NZ_CP002882.1_637469_638372_-	PRK08321, PRK08321, 1,4-dihydroxy-2-naphthoyl-CoA synthase
GCF_000572155.1_ASM57215v1	NZ_CP002882	Mycobacterium tuberculosis BT2 chromosome, complete genome	3	690479-690555	2	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	TGAGGTGCGGCGTGAGCGCGGGT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|72aa|up_9|NZ_CP002882.1_676161_676377_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|136aa|up_8|NZ_CP002882.1_676373_676781_+	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|229aa|up_7|NZ_CP002882.1_676840_677527_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|878aa|up_6|NZ_CP002882.1_677680_680314_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|796aa|up_5|NZ_CP002882.1_680336_682724_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|241aa|up_4|NZ_CP002882.1_682861_683584_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|266aa|up_3|NZ_CP002882.1_683580_684378_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|296aa|up_2|NZ_CP002882.1_684379_685267_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|405aa|up_1|NZ_CP002882.1_685272_686487_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|482aa|up_0|NZ_CP002882.1_687512_688958_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|517aa|down_0|NZ_CP002882.1_691690_693241_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|131aa|down_1|NZ_CP002882.1_693292_693685_-	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|86aa|down_2|NZ_CP002882.1_693681_693939_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|412aa|down_3|NZ_CP002882.1_694121_695357_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|138aa|down_4|NZ_CP002882.1_695607_696021_-	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|79aa|down_5|NZ_CP002882.1_696017_696254_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|169aa|down_6|NZ_CP002882.1_696357_696864_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|177aa|down_7|NZ_CP002882.1_696977_697508_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|254aa|down_8|NZ_CP002882.1_697491_698253_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|104aa|down_9|NZ_CP002882.1_698309_698621_+	pfam03413, PepSY, Peptidase propeptide and YPEB domain
GCF_000572155.1_ASM57215v1	NZ_CP002882	Mycobacterium tuberculosis BT2 chromosome, complete genome	4	1576626-1577698	3	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	32	1	1	1576826-1576847	NZ_CP002882.1_1212305-1212284	NA	15	15	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|106aa|up_7|NZ_CP002882.1_1568389_1568707_+,NA	NA|103aa|up_9|NZ_CP002882.1_1565904_1566213_+	pfam00934, PE, PE family	NA|540aa|up_8|NZ_CP002882.1_1566209_1567829_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|106aa|up_7|NZ_CP002882.1_1568389_1568707_+	NA	NA|209aa|up_6|NZ_CP002882.1_1568841_1569468_+	PRK00300, gmk, guanylate kinase; Provisional	NA|111aa|up_5|NZ_CP002882.1_1569533_1569866_+	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit	NA|419aa|up_4|NZ_CP002882.1_1569881_1571138_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|404aa|up_3|NZ_CP002882.1_1571265_1572477_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|493aa|up_2|NZ_CP002882.1_1572549_1574028_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|462aa|up_1|NZ_CP002882.1_1574024_1575410_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|345aa|up_0|NZ_CP002882.1_1575487_1576522_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|134aa|down_0|NZ_CP002882.1_1578552_1578954_-	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|86aa|down_1|NZ_CP002882.1_1578950_1579208_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|320aa|down_2|NZ_CP002882.1_1579290_1580250_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|321aa|down_3|NZ_CP002882.1_1580274_1581237_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|246aa|down_4|NZ_CP002882.1_1581235_1581973_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|656aa|down_5|NZ_CP002882.1_1582053_1584021_+	PRK14873, PRK14873, primosomal protein N'	NA|275aa|down_6|NZ_CP002882.1_1584038_1584863_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|161aa|down_7|NZ_CP002882.1_1585031_1585514_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|down_8|NZ_CP002882.1_1585585_1586410_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|313aa|down_9|NZ_CP002882.1_1586606_1587545_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed
GCF_000572155.1_ASM57215v1	NZ_CP002882	Mycobacterium tuberculosis BT2 chromosome, complete genome	5	2075208-2075462	2	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCNCCGTCGCCGCCNNTGCC	21	2	3	2075289-2075306|2075289-2075306|2075379-2075396	NZ_CP002882.1_399528-399511|NZ_CP002882.1_605821-605804|NZ_CP002882.1_3428280-3428263	NA	5	5	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|88aa|up_0|NZ_CP002882.1_2074567_2074831_-,NA	NA|165aa|up_9|NZ_CP002882.1_2060917_2061412_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|211aa|up_8|NZ_CP002882.1_2061804_2062437_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|942aa|up_7|NZ_CP002882.1_2062795_2065621_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|287aa|up_6|NZ_CP002882.1_2065847_2066708_-	PRK03204, PRK03204, haloalkane dehalogenase; Provisional	NA|289aa|up_5|NZ_CP002882.1_2066748_2067615_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|629aa|up_4|NZ_CP002882.1_2067619_2069506_-	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c	NA|678aa|up_3|NZ_CP002882.1_2069521_2071555_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|742aa|up_2|NZ_CP002882.1_2071674_2073900_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|132aa|up_1|NZ_CP002882.1_2074175_2074571_-	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|88aa|up_0|NZ_CP002882.1_2074567_2074831_-	NA	NA|346aa|down_0|NZ_CP002882.1_2076599_2077637_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|456aa|down_1|NZ_CP002882.1_2077636_2079004_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|480aa|down_2|NZ_CP002882.1_2079177_2080617_-	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein	NA|484aa|down_3|NZ_CP002882.1_2080649_2082101_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|317aa|down_4|NZ_CP002882.1_2082130_2083081_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|139aa|down_5|NZ_CP002882.1_2083095_2083512_-	COG3682, COG3682, Predicted transcriptional regulator [Transcription]	NA|141aa|down_6|NZ_CP002882.1_2083789_2084212_+	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|101aa|down_7|NZ_CP002882.1_2084260_2084563_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|105aa|down_8|NZ_CP002882.1_2084559_2084874_+	PRK13202, ureB, urease subunit beta; Reviewed	NA|578aa|down_9|NZ_CP002882.1_2084873_2086607_+	PRK13206, ureC, urease subunit alpha; Reviewed
GCF_000572155.1_ASM57215v1	NZ_CP002882	Mycobacterium tuberculosis BT2 chromosome, complete genome	6	2147903-2148122	4	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	49	0	0	NA	NA	NA	1	1	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|157aa|up_2|NZ_CP002882.1_2139408_2139879_-,NA|127aa|down_5|NZ_CP002882.1_2155638_2156019_-	NA|108aa|up_9|NZ_CP002882.1_2132908_2133232_+	PTZ00146, PTZ00146, fibrillarin; Provisional	NA|463aa|up_8|NZ_CP002882.1_2133228_2134617_-	cd07302, CHD, cyclase homology domain	NA|431aa|up_7|NZ_CP002882.1_2134645_2135938_+	PRK00549, PRK00549, competence damage-inducible protein A; Provisional	NA|423aa|up_6|NZ_CP002882.1_2135989_2137258_-	TIGR00891, Carboxylic_acid_transporter_protein_homolog, putative sialic acid transporter	NA|135aa|up_5|NZ_CP002882.1_2137347_2137752_+	COG1950, COG1950, Predicted membrane protein [Function unknown]	NA|144aa|up_4|NZ_CP002882.1_2137937_2138369_+	TIGR00377, Anti-sigma_F_factor_antagonist, anti-anti-sigma factor	NA|321aa|up_3|NZ_CP002882.1_2138416_2139379_-	pfam01266, DAO, FAD dependent oxidoreductase	NA|157aa|up_2|NZ_CP002882.1_2139408_2139879_-	NA	NA|155aa|up_1|NZ_CP002882.1_2140218_2140683_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|421aa|up_0|NZ_CP002882.1_2143479_2144741_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|155aa|down_0|NZ_CP002882.1_2150149_2150614_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_1|NZ_CP002882.1_2150711_2151575_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_2|NZ_CP002882.1_2151612_2152884_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_3|NZ_CP002882.1_2153155_2154271_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_4|NZ_CP002882.1_2154261_2155602_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_5|NZ_CP002882.1_2155638_2156019_-	NA	NA|621aa|down_6|NZ_CP002882.1_2156175_2158038_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_7|NZ_CP002882.1_2158045_2158525_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_8|NZ_CP002882.1_2158761_2159535_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|256aa|down_9|NZ_CP002882.1_2159538_2160306_-	PRK05867, PRK05867, SDR family oxidoreductase
GCF_000572155.1_ASM57215v1	NZ_CP002882	Mycobacterium tuberculosis BT2 chromosome, complete genome	7	3101837-3102984	1,5,3,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	csm3gr7,csm2gr11,cas10,cas6	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Type III-A,Type III-C,Type III-D,Type III-B	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,TCGAGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36,40	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A:II-B,III-A	11,14,15,11	15	TypeIII-A,TypeIII-C,TypeIII-D,TypeIII-B	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_8|NZ_CP002882.1_3093758_3094013_-,NA|135aa|up_7|NZ_CP002882.1_3094160_3094565_+,NA|64aa|up_6|NZ_CP002882.1_3094561_3094753_+,NA|95aa|up_4|NZ_CP002882.1_3097670_3097955_+,NA|104aa|up_3|NZ_CP002882.1_3098059_3098371_+,NA|203aa|up_2|NZ_CP002882.1_3098790_3099399_+,NA	NA|92aa|up_9|NZ_CP002882.1_3093307_3093583_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_8|NZ_CP002882.1_3093758_3094013_-	NA	NA|135aa|up_7|NZ_CP002882.1_3094160_3094565_+	NA	NA|64aa|up_6|NZ_CP002882.1_3094561_3094753_+	NA	NA|421aa|up_5|NZ_CP002882.1_3096400_3097662_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|95aa|up_4|NZ_CP002882.1_3097670_3097955_+	NA	NA|104aa|up_3|NZ_CP002882.1_3098059_3098371_+	NA	NA|203aa|up_2|NZ_CP002882.1_3098790_3099399_+	NA	NA|470aa|up_1|NZ_CP002882.1_3099469_3100879_+	pfam00665, rve, Integrase core domain	NA|271aa|up_0|NZ_CP002882.1_3100875_3101688_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|down_0|NZ_CP002882.1_3103015_3104277_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	csm3gr7|237aa|down_1|NZ_CP002882.1_3104640_3105351_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_2|NZ_CP002882.1_3105360_3105735_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_3|NZ_CP002882.1_3105731_3108170_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|263aa|down_4|NZ_CP002882.1_3108166_3108955_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|182aa|down_5|NZ_CP002882.1_3109288_3109834_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]	NA|295aa|down_6|NZ_CP002882.1_3110105_3110990_-	COG2253, COG2253, Uncharacterized conserved protein [Function unknown]	NA|296aa|down_7|NZ_CP002882.1_3110992_3111880_-	pfam09407, AbiEi_1, AbiEi antitoxin C-terminal domain	NA|182aa|down_8|NZ_CP002882.1_3112184_3112730_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]	NA|90aa|down_9|NZ_CP002882.1_3112726_3112996_-	COG5552, COG5552, Uncharacterized conserved protein [Function unknown]
GCF_000572155.1_ASM57215v1	NZ_CP002882	Mycobacterium tuberculosis BT2 chromosome, complete genome	8	3645660-3645778	6	CRISPRCasFinder	no	cas3	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Unclear	GCCCCTGTGAGTCGAGTGAGCGGAACGAAC	30	1	1	3645690-3645748	NZ_CP002882.1_3645753-3645811	NA	1	1	Unclear	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA|104aa|down_6|NZ_CP002882.1_3651411_3651723_-,NA|126aa|down_7|NZ_CP002882.1_3651859_3652237_-	NA|719aa|up_9|NZ_CP002882.1_3632486_3634643_+	COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|223aa|up_8|NZ_CP002882.1_3634639_3635308_-	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|395aa|up_7|NZ_CP002882.1_3635408_3636593_+	pfam02515, CoA_transf_3, CoA-transferase family III	NA|757aa|up_6|NZ_CP002882.1_3636621_3638892_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|390aa|up_5|NZ_CP002882.1_3638880_3640050_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|175aa|up_4|NZ_CP002882.1_3640074_3640599_-	PLN02948, PLN02948, phosphoribosylaminoimidazole carboxylase	NA|430aa|up_3|NZ_CP002882.1_3640595_3641885_-	TIGR01161, N5-carboxyaminoimidazole_ribonucleotide_synthase, phosphoribosylaminoimidazole carboxylase, PurK protein	NA|224aa|up_2|NZ_CP002882.1_3641985_3642657_+	COG2246, COG2246, Predicted membrane protein [Function unknown]	NA|173aa|up_1|NZ_CP002882.1_3642611_3643130_-	pfam03703, bPH_2, Bacterial PH domain	NA|267aa|up_0|NZ_CP002882.1_3643172_3643973_-	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism]	NA|223aa|down_0|NZ_CP002882.1_3646044_3646713_+	PRK00148, PRK00148, Maf-like protein; Reviewed	NA|298aa|down_1|NZ_CP002882.1_3646753_3647647_+	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|144aa|down_2|NZ_CP002882.1_3647643_3648075_+	COG2166, sufE, Cysteine desulfurase SufE subunit [Posttranslational modification, protein turnover, chaperones]	NA|601aa|down_3|NZ_CP002882.1_3648182_3649985_+	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]	NA|262aa|down_4|NZ_CP002882.1_3649994_3650780_-	PRK07122, PRK07122, RNA polymerase sigma factor SigF; Reviewed	NA|146aa|down_5|NZ_CP002882.1_3650776_3651214_-	COG2172, RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms]	NA|104aa|down_6|NZ_CP002882.1_3651411_3651723_-	NA	NA|126aa|down_7|NZ_CP002882.1_3651859_3652237_-	NA	NA|450aa|down_8|NZ_CP002882.1_3652270_3653620_-	PRK08297, PRK08297, L-lysine aminotransferase; Provisional	NA|151aa|down_9|NZ_CP002882.1_3653670_3654123_-	smart00344, HTH_ASNC, helix_turn_helix ASNC type
GCF_000572155.1_ASM57215v1	NZ_CP002882	Mycobacterium tuberculosis BT2 chromosome, complete genome	9	3726402-3726978	4	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCGCCGTTGCCNCCGNNGCCGCCG	25	0	0	NA	NA	NA	7	7	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA|96aa|down_4|NZ_CP002882.1_3741210_3741498_-	NA|147aa|up_9|NZ_CP002882.1_3706942_3707383_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|290aa|up_8|NZ_CP002882.1_3707416_3708286_-	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|337aa|up_7|NZ_CP002882.1_3708306_3709317_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|215aa|up_6|NZ_CP002882.1_3709589_3710234_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|410aa|up_5|NZ_CP002882.1_3710300_3711530_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_4|NZ_CP002882.1_3711812_3713162_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_3|NZ_CP002882.1_3713173_3714313_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_2|NZ_CP002882.1_3714309_3715041_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|2538aa|up_1|NZ_CP002882.1_3715049_3722663_-	pfam00823, PPE, PPE family	NA|327aa|up_0|NZ_CP002882.1_3722711_3723692_-	pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal	NA|86aa|down_0|NZ_CP002882.1_3729080_3729338_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|down_1|NZ_CP002882.1_3729593_3739067_-	pfam00823, PPE, PPE family	NA|149aa|down_2|NZ_CP002882.1_3739692_3740139_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|down_3|NZ_CP002882.1_3740175_3740916_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|down_4|NZ_CP002882.1_3741210_3741498_-	NA	NA|130aa|down_5|NZ_CP002882.1_3754992_3755382_+	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|98aa|down_6|NZ_CP002882.1_3755395_3755689_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|282aa|down_7|NZ_CP002882.1_3755685_3756531_-	PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	NA|92aa|down_8|NZ_CP002882.1_3756654_3756930_+	COG2161, StbD, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|86aa|down_9|NZ_CP002882.1_3756926_3757184_+	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system
GCF_000572155.1_ASM57215v1	NZ_CP002882	Mycobacterium tuberculosis BT2 chromosome, complete genome	10	3836262-3836351	7	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCAGGCGTTGGGCTGGCTGCCGAT	24	0	0	NA	NA	NA	1	1	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|77aa|up_6|NZ_CP002882.1_3828298_3828529_+,NA|121aa|up_5|NZ_CP002882.1_3828632_3828995_-,NA|121aa|down_0|NZ_CP002882.1_3837336_3837699_-,NA|52aa|down_2|NZ_CP002882.1_3839540_3839696_-,NA|52aa|down_3|NZ_CP002882.1_3839720_3839876_-,NA|238aa|down_6|NZ_CP002882.1_3843911_3844625_-	NA|212aa|up_9|NZ_CP002882.1_3825977_3826613_-	COG1214, COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|169aa|up_8|NZ_CP002882.1_3826609_3827116_-	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only]	NA|387aa|up_7|NZ_CP002882.1_3827112_3828273_-	PRK00053, alr, alanine racemase; Reviewed	NA|77aa|up_6|NZ_CP002882.1_3828298_3828529_+	NA	NA|121aa|up_5|NZ_CP002882.1_3828632_3828995_-	NA	NA|177aa|up_4|NZ_CP002882.1_3829953_3830484_+	pfam00823, PPE, PPE family	NA|252aa|up_3|NZ_CP002882.1_3830801_3831557_-	COG1484, DnaC, DNA replication protein [DNA replication, recombination, and repair]	NA|421aa|up_2|NZ_CP002882.1_3831640_3832902_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|100aa|up_1|NZ_CP002882.1_3835040_3835340_+	pfam00934, PE, PE family	NA|181aa|up_0|NZ_CP002882.1_3835425_3835968_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|121aa|down_0|NZ_CP002882.1_3837336_3837699_-	NA	NA|179aa|down_1|NZ_CP002882.1_3837861_3838398_+	pfam00823, PPE, PPE family	NA|52aa|down_2|NZ_CP002882.1_3839540_3839696_-	NA	NA|52aa|down_3|NZ_CP002882.1_3839720_3839876_-	NA	NA|461aa|down_4|NZ_CP002882.1_3841068_3842451_-	TIGR01788, Glutamate_decarboxylase_alpha_GAD-alpha	NA|474aa|down_5|NZ_CP002882.1_3842488_3843910_-	pfam01256, Carb_kinase, Carbohydrate kinase	NA|238aa|down_6|NZ_CP002882.1_3843911_3844625_-	NA	NA|285aa|down_7|NZ_CP002882.1_3844635_3845490_-	pfam14494, DUF4436, Domain of unknown function (DUF4436)	NA|625aa|down_8|NZ_CP002882.1_3845711_3847586_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|159aa|down_9|NZ_CP002882.1_3847607_3848084_+	pfam10708, DUF2510, Protein of unknown function (DUF2510)
GCF_000572155.1_ASM57215v1	NZ_CP002882	Mycobacterium tuberculosis BT2 chromosome, complete genome	11	3921594-3922538	5	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GGCGGNNNCGGCGGCNCCGGCGGC	24	0	0	NA	NA	NA	12	12	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA|280aa|down_4|NZ_CP002882.1_3943362_3944202_+	NA|351aa|up_9|NZ_CP002882.1_3906340_3907393_-	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|401aa|up_8|NZ_CP002882.1_3907392_3908595_-	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|281aa|up_7|NZ_CP002882.1_3908614_3909457_-	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|255aa|up_6|NZ_CP002882.1_3909491_3910256_-	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|318aa|up_5|NZ_CP002882.1_3910481_3911435_-	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|64aa|up_4|NZ_CP002882.1_3911459_3911651_-	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|401aa|up_3|NZ_CP002882.1_3911865_3913068_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_2|NZ_CP002882.1_3913092_3914214_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_1|NZ_CP002882.1_3914284_3915793_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|1384aa|up_0|NZ_CP002882.1_3915963_3920115_+	pfam00934, PE, PE family	NA|516aa|down_0|NZ_CP002882.1_3925434_3926982_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|down_1|NZ_CP002882.1_3926978_3927815_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|549aa|down_2|NZ_CP002882.1_3940755_3942402_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_3|NZ_CP002882.1_3942475_3943267_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_4|NZ_CP002882.1_3943362_3944202_+	NA	NA|399aa|down_5|NZ_CP002882.1_3944256_3945453_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_6|NZ_CP002882.1_3945481_3946192_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|344aa|down_7|NZ_CP002882.1_3946256_3947288_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|335aa|down_8|NZ_CP002882.1_3947359_3948364_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|355aa|down_9|NZ_CP002882.1_3948379_3949444_+	PRK07937, PRK07937, lipid-transfer protein; Provisional
GCF_000572155.1_ASM57215v1	NZ_CP002882	Mycobacterium tuberculosis BT2 chromosome, complete genome	12	3938281-3939894	6	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CNCCGGCGGNACCGGCGGCNNNGGCGGCNCCGGCGG	36	1	6	3938881-3938916|3938881-3938916|3938881-3938916|3938881-3938916|3938881-3938916|3938881-3938916	NZ_CP002882.1_3936748-3936783|NZ_CP002882.1_3937060-3937095|NZ_CP002882.1_3937411-3937446|NZ_CP002882.1_3937762-3937797|NZ_CP002882.1_3937921-3937956|NZ_CP002882.1_3938272-3938307	NA	20	20	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA|280aa|down_2|NZ_CP002882.1_3943362_3944202_+	NA|255aa|up_9|NZ_CP002882.1_3909491_3910256_-	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|318aa|up_8|NZ_CP002882.1_3910481_3911435_-	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|64aa|up_7|NZ_CP002882.1_3911459_3911651_-	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|401aa|up_6|NZ_CP002882.1_3911865_3913068_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_5|NZ_CP002882.1_3913092_3914214_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_4|NZ_CP002882.1_3914284_3915793_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|1384aa|up_3|NZ_CP002882.1_3915963_3920115_+	pfam00934, PE, PE family	NA|1621aa|up_2|NZ_CP002882.1_3920405_3925268_+	pfam00934, PE, PE family	NA|516aa|up_1|NZ_CP002882.1_3925434_3926982_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|up_0|NZ_CP002882.1_3926978_3927815_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|549aa|down_0|NZ_CP002882.1_3940755_3942402_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_1|NZ_CP002882.1_3942475_3943267_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_2|NZ_CP002882.1_3943362_3944202_+	NA	NA|399aa|down_3|NZ_CP002882.1_3944256_3945453_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_4|NZ_CP002882.1_3945481_3946192_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|344aa|down_5|NZ_CP002882.1_3946256_3947288_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|335aa|down_6|NZ_CP002882.1_3947359_3948364_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|355aa|down_7|NZ_CP002882.1_3948379_3949444_+	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|395aa|down_8|NZ_CP002882.1_3949460_3950645_+	PRK08313, PRK08313, thiolase domain-containing protein	NA|344aa|down_9|NZ_CP002882.1_3950686_3951718_+	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD
GCF_000572155.1_ASM57215v1	NZ_CP002882	Mycobacterium tuberculosis BT2 chromosome, complete genome	13	4100737-4100825	8	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCTCGGCGACGATGCGGGCCGGATGACGGCC	31	0	0	NA	NA	NA	1	1	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|257aa|up_6|NZ_CP002882.1_4091323_4092094_-,NA|233aa|up_0|NZ_CP002882.1_4099841_4100540_-,NA|126aa|down_6|NZ_CP002882.1_4106060_4106438_+	NA|388aa|up_9|NZ_CP002882.1_4086994_4088158_-	TIGR03819, heli_sec_ATPase, helicase/secretion neighborhood ATPase	NA|351aa|up_8|NZ_CP002882.1_4088154_4089207_-	TIGR03815, CpaE_hom_Actino, helicase/secretion neighborhood CpaE-like protein	NA|288aa|up_7|NZ_CP002882.1_4089705_4090569_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|257aa|up_6|NZ_CP002882.1_4091323_4092094_-	NA	NA|549aa|up_5|NZ_CP002882.1_4092090_4093737_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|288aa|up_4|NZ_CP002882.1_4093733_4094597_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|up_3|NZ_CP002882.1_4094589_4095516_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|up_2|NZ_CP002882.1_4095517_4097143_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|652aa|up_1|NZ_CP002882.1_4097850_4099806_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|233aa|up_0|NZ_CP002882.1_4099841_4100540_-	NA	NA|173aa|down_0|NZ_CP002882.1_4100885_4101404_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|328aa|down_1|NZ_CP002882.1_4101404_4102388_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_2|NZ_CP002882.1_4102380_4103574_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|274aa|down_3|NZ_CP002882.1_4103579_4104401_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|216aa|down_4|NZ_CP002882.1_4104532_4105180_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|246aa|down_5|NZ_CP002882.1_4105215_4105953_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|126aa|down_6|NZ_CP002882.1_4106060_4106438_+	NA	NA|225aa|down_7|NZ_CP002882.1_4106536_4107211_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|265aa|down_8|NZ_CP002882.1_4107316_4108111_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|152aa|down_9|NZ_CP002882.1_4108117_4108573_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
