assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	1	29361-29636	1	CRT	no		WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Orphan	GTACCCGCCGCCCTGCTG	18	0	0	NA	NA	NA	4	4	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA|52aa|up_7|NZ_CP007155.1_19662_19818_+,NA|362aa|down_0|NZ_CP007155.1_30509_31595_-,NA|212aa|down_1|NZ_CP007155.1_32234_32870_+,NA|122aa|down_8|NZ_CP007155.1_40068_40434_-,NA|73aa|down_9|NZ_CP007155.1_40446_40665_-	NA|89aa|up_9|NZ_CP007155.1_18216_18483_-	pfam06781, CrgA, Cell division protein CrgA	NA|344aa|up_8|NZ_CP007155.1_18629_19661_+	cd05830, Sortase_E, Sortase domain found in the class E family of sortases	NA|52aa|up_7|NZ_CP007155.1_19662_19818_+	NA	NA|215aa|up_6|NZ_CP007155.1_19836_20481_+	PRK07765, PRK07765, aminodeoxychorismate/anthranilate synthase component II	NA|667aa|up_5|NZ_CP007155.1_20534_22535_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|478aa|up_4|NZ_CP007155.1_22669_24103_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|496aa|up_3|NZ_CP007155.1_24105_25593_-	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|484aa|up_2|NZ_CP007155.1_25589_27041_-	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning]	NA|477aa|up_1|NZ_CP007155.1_27040_28471_-	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|154aa|up_0|NZ_CP007155.1_28467_28929_-	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms]	NA|362aa|down_0|NZ_CP007155.1_30509_31595_-	NA	NA|212aa|down_1|NZ_CP007155.1_32234_32870_+	NA	NA|220aa|down_2|NZ_CP007155.1_32885_33545_+	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	NA|448aa|down_3|NZ_CP007155.1_33765_35109_-	TIGR01679, bact_FAD_ox, FAD-linked oxidoreductase	NA|402aa|down_4|NZ_CP007155.1_35197_36403_+	cd06813, PLPDE_III_DSD_D-TA_like_2, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes Similar to D-Serine Dehydratase and D-Threonine Aldolase, Unknown Group 2	NA|185aa|down_5|NZ_CP007155.1_36411_36966_-	pfam17928, TetR_C_22, Tetracyclin repressor-like, C-terminal domain	NA|438aa|down_6|NZ_CP007155.1_37242_38556_+	TIGR03356, BGL, beta-galactosidase	NA|425aa|down_7|NZ_CP007155.1_38555_39830_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|122aa|down_8|NZ_CP007155.1_40068_40434_-	NA	NA|73aa|down_9|NZ_CP007155.1_40446_40665_-	NA
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	2	643216-643324	1	CRISPRCasFinder	no		WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Orphan	GACATCTCGGCCCCGCAGAACGTGCCGA	28	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA,NA|213aa|down_0|NZ_CP007155.1_644235_644874_-,NA|149aa|down_9|NZ_CP007155.1_654189_654636_-	NA|101aa|up_9|NZ_CP007155.1_633972_634275_+	PRK13241, ureA, urease subunit gamma; Provisional	NA|102aa|up_8|NZ_CP007155.1_634286_634592_+	pfam00699, Urease_beta, Urease beta subunit	NA|574aa|up_7|NZ_CP007155.1_634588_636310_+	PRK13206, ureC, urease subunit alpha; Reviewed	NA|223aa|up_6|NZ_CP007155.1_636315_636984_+	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones]	NA|264aa|up_5|NZ_CP007155.1_636874_637666_+	cd05540, UreG, urease accessory protein UreG	NA|254aa|up_4|NZ_CP007155.1_637662_638424_+	pfam01774, UreD, UreD urease accessory protein	NA|220aa|up_3|NZ_CP007155.1_638632_639292_+	TIGR00558, Pyridoxine/pyridoxamine_5'-phosphate_oxidase, pyridoxamine-phosphate oxidase	NA|435aa|up_2|NZ_CP007155.1_639349_640654_+	PRK10489, PRK10489, enterobactin transporter EntS	NA|297aa|up_1|NZ_CP007155.1_641215_642106_-	cd09999, Arginase-like_1, Arginase-like amidino hydrolase family	NA|294aa|up_0|NZ_CP007155.1_642247_643129_+	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter	NA|213aa|down_0|NZ_CP007155.1_644235_644874_-	NA	NA|302aa|down_1|NZ_CP007155.1_644970_645876_+	cd09022, Aldose_epim_Ec_YihR, Aldose 1-epimerase, similar to Escherichia coli YihR	NA|141aa|down_2|NZ_CP007155.1_645872_646295_-	cd01282, HTH_MerR-like_sg3, Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily	NA|358aa|down_3|NZ_CP007155.1_646321_647395_+	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain	NA|405aa|down_4|NZ_CP007155.1_647434_648649_+	cd01309, Met_dep_hydrolase_C, Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	NA|378aa|down_5|NZ_CP007155.1_648791_649925_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|198aa|down_6|NZ_CP007155.1_650052_650646_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|314aa|down_7|NZ_CP007155.1_650714_651656_+	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate	NA|439aa|down_8|NZ_CP007155.1_652227_653544_+	PRK05614, gltA, citrate synthase	NA|149aa|down_9|NZ_CP007155.1_654189_654636_-	NA
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	3	1468157-1468259	2	CRISPRCasFinder	no	DEDDh	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Unclear	GCCGCACCTCGCTGACGCTCGGCGC	25	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA|149aa|up_9|NZ_CP007155.1_1458647_1459094_-,NA	NA|149aa|up_9|NZ_CP007155.1_1458647_1459094_-	NA	NA|341aa|up_8|NZ_CP007155.1_1459406_1460429_+	TIGR04247, nitrous_oxide_maturation_protein_NosD, nitrous oxide reductase family maturation protein NosD	NA|291aa|up_7|NZ_CP007155.1_1460683_1461556_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|251aa|up_6|NZ_CP007155.1_1461564_1462317_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|312aa|up_5|NZ_CP007155.1_1462333_1463269_+	cd01004, PBP2_MidA_like, Mimosine binding domain of ABC-type transporter MidA and similar proteins; the type 2 periplasmic binding protein fold	NA|406aa|up_4|NZ_CP007155.1_1463468_1464686_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|95aa|up_3|NZ_CP007155.1_1464678_1464963_+	pfam01527, HTH_Tnp_1, Transposase	NA|337aa|up_2|NZ_CP007155.1_1464998_1466009_-	pfam02983, Pro_Al_protease, Alpha-lytic protease prodomain	NA|54aa|up_1|NZ_CP007155.1_1466196_1466358_-	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs	NA|545aa|up_0|NZ_CP007155.1_1466520_1468155_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|784aa|down_0|NZ_CP007155.1_1468309_1470661_-	cd02609, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporter, similar to uncharacterized Streptococcus pneumoniae exported protein 7, Exp7	NA|182aa|down_1|NZ_CP007155.1_1470753_1471299_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|254aa|down_2|NZ_CP007155.1_1471373_1472135_-	cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms	NA|335aa|down_3|NZ_CP007155.1_1472247_1473252_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|1190aa|down_4|NZ_CP007155.1_1473543_1477113_-	cd14490, CBM6-CBM35-CBM36_like_1, uncharacterized members of the carbohydrate binding module 6 (CBM6) and CBM35_like superfamily	NA|665aa|down_5|NZ_CP007155.1_1477284_1479279_-	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only]	NA|290aa|down_6|NZ_CP007155.1_1479414_1480284_-	cd07727, YmaE-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YmaE and related proteins; MBL-fold metallo hydrolase domain	DEDDh|204aa|down_7|NZ_CP007155.1_1480695_1481307_-	PRK05359, PRK05359, oligoribonuclease; Provisional	NA|509aa|down_8|NZ_CP007155.1_1481414_1482941_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|166aa|down_9|NZ_CP007155.1_1482990_1483488_+	pfam12840, HTH_20, Helix-turn-helix domain
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	4	1545341-1545445	3	CRISPRCasFinder	no	WYL	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Unclear	ATGGTTCGCTCGCAAGCTCGCTCACGT	27	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA|117aa|up_7|NZ_CP007155.1_1536015_1536366_-,NA|97aa|down_8|NZ_CP007155.1_1554317_1554608_-	NA|451aa|up_9|NZ_CP007155.1_1534113_1535466_-	PRK15315, PRK15315, outer membrane protein RatA; Provisional	NA|178aa|up_8|NZ_CP007155.1_1535485_1536019_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|117aa|up_7|NZ_CP007155.1_1536015_1536366_-	NA	NA|693aa|up_6|NZ_CP007155.1_1536483_1538562_-	cd01948, EAL, EAL domain	NA|270aa|up_5|NZ_CP007155.1_1538716_1539526_-	pfam04672, Methyltransf_19, S-adenosyl methyltransferase	NA|268aa|up_4|NZ_CP007155.1_1539563_1540367_-	pfam04672, Methyltransf_19, S-adenosyl methyltransferase	NA|369aa|up_3|NZ_CP007155.1_1540531_1541638_-	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|344aa|up_2|NZ_CP007155.1_1541779_1542811_-	PRK02983, lysS, bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX	NA|567aa|up_1|NZ_CP007155.1_1542814_1544515_-	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|259aa|up_0|NZ_CP007155.1_1544511_1545288_-	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ	NA|242aa|down_0|NZ_CP007155.1_1546091_1546817_-	cd11642, SUMT, Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT)	NA|248aa|down_1|NZ_CP007155.1_1546813_1547557_-	cd11646, Precorrin_3B_C17_MT, Precorrin-3B C(17)-methyltransferase (also named CobJ or CbiH)	NA|273aa|down_2|NZ_CP007155.1_1547553_1548372_-	cd11641, Precorrin-4_C11-MT, Precorrin-4 C11-methyltransferase (CbiF/CobM)	NA|182aa|down_3|NZ_CP007155.1_1548683_1549229_+	pfam02570, CbiC, Precorrin-8X methylmutase	NA|251aa|down_4|NZ_CP007155.1_1549315_1550068_+	PRK02947, PRK02947, sugar isomerase domain-containing protein	WYL|332aa|down_5|NZ_CP007155.1_1550034_1551030_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|364aa|down_6|NZ_CP007155.1_1551046_1552138_-	pfam06224, HTH_42, Winged helix DNA-binding domain	NA|645aa|down_7|NZ_CP007155.1_1552163_1554098_-	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|97aa|down_8|NZ_CP007155.1_1554317_1554608_-	NA	NA|274aa|down_9|NZ_CP007155.1_1554770_1555592_+	TIGR02811, formate_dehydrogenase_accessory_protein_FdhX, formate dehydrogenase region TAT target
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	5	2005222-2005332	4	CRISPRCasFinder	no		WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Orphan	CGTCCTGAACGGCACCTTCCTGACAT	26	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA|443aa|up_2|NZ_CP007155.1_2002398_2003727_-,NA|204aa|up_0|NZ_CP007155.1_2004533_2005145_+,NA|129aa|down_4|NZ_CP007155.1_2009677_2010064_-	NA|193aa|up_9|NZ_CP007155.1_1995812_1996391_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|252aa|up_8|NZ_CP007155.1_1996448_1997204_+	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|459aa|up_7|NZ_CP007155.1_1997441_1998818_+	COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]	NA|344aa|up_6|NZ_CP007155.1_1998834_1999866_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|204aa|up_5|NZ_CP007155.1_1999870_2000482_+	pfam04299, FMN_bind_2, Putative FMN-binding domain	NA|204aa|up_4|NZ_CP007155.1_2000478_2001090_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|393aa|up_3|NZ_CP007155.1_2001230_2002409_+	pfam03583, LIP, Secretory lipase	NA|443aa|up_2|NZ_CP007155.1_2002398_2003727_-	NA	NA|168aa|up_1|NZ_CP007155.1_2003995_2004499_+	pfam11343, DUF3145, Protein of unknown function (DUF3145)	NA|204aa|up_0|NZ_CP007155.1_2004533_2005145_+	NA	NA|411aa|down_0|NZ_CP007155.1_2006082_2007315_-	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II	NA|80aa|down_1|NZ_CP007155.1_2007311_2007551_-	PRK00982, acpP, acyl carrier protein; Provisional	NA|329aa|down_2|NZ_CP007155.1_2007607_2008594_-	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3	NA|314aa|down_3|NZ_CP007155.1_2008590_2009532_-	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|129aa|down_4|NZ_CP007155.1_2009677_2010064_-	NA	NA|400aa|down_5|NZ_CP007155.1_2010139_2011339_-	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|516aa|down_6|NZ_CP007155.1_2011443_2012991_+	pfam08386, Abhydrolase_4, TAP-like protein	NA|260aa|down_7|NZ_CP007155.1_2013296_2014076_+	pfam05552, TM_helix, Conserved TM helix	NA|212aa|down_8|NZ_CP007155.1_2014147_2014783_+	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter	NA|320aa|down_9|NZ_CP007155.1_2014683_2015643_-	cd10938, CE4_HpPgdA_like, Catalytic domain of Helicobacter pylori peptidoglycan deacetylase (HpPgdA) and similar proteins
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	6	3365940-3366094	5	CRISPRCasFinder	no	WYL	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Unclear	CCCCGCTCGCGCGGGGACGACGC	23	0	0	NA	NA	NA	2	2	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA|84aa|up_8|NZ_CP007155.1_3355326_3355578_+,NA|270aa|up_7|NZ_CP007155.1_3355598_3356408_+,NA|82aa|up_2|NZ_CP007155.1_3363754_3364000_+,NA|227aa|down_4|NZ_CP007155.1_3372389_3373070_+	NA|246aa|up_9|NZ_CP007155.1_3354276_3355014_+	TIGR03691, 20S_bact_alpha, proteasome, alpha subunit, bacterial type	NA|84aa|up_8|NZ_CP007155.1_3355326_3355578_+	NA	NA|270aa|up_7|NZ_CP007155.1_3355598_3356408_+	NA	NA|470aa|up_6|NZ_CP007155.1_3356461_3357871_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|1217aa|up_5|NZ_CP007155.1_3357949_3361600_-	COG0457, NrfG, FOG: TPR repeat [General function prediction only]	WYL|330aa|up_4|NZ_CP007155.1_3361698_3362688_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	WYL|325aa|up_3|NZ_CP007155.1_3362761_3363736_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|82aa|up_2|NZ_CP007155.1_3363754_3364000_+	NA	NA|292aa|up_1|NZ_CP007155.1_3364080_3364956_+	pfam00902, TatC, Sec-independent protein translocase protein (TatC)	NA|287aa|up_0|NZ_CP007155.1_3364952_3365813_+	PRK11914, PRK11914, diacylglycerol kinase; Reviewed	NA|115aa|down_0|NZ_CP007155.1_3366312_3366657_+	COG5416, COG5416, Uncharacterized integral membrane protein [Function unknown]	NA|345aa|down_1|NZ_CP007155.1_3366918_3367953_-	cd08589, PI-PLCc_SaPLC1_like, Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins	NA|277aa|down_2|NZ_CP007155.1_3368127_3368958_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|1079aa|down_3|NZ_CP007155.1_3369113_3372350_+	cd03678, MM_CoA_mutase_1, Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, unknown subfamily 1; composed of uncharacterized bacterial proteins containing a C-terminal MCM domain	NA|227aa|down_4|NZ_CP007155.1_3372389_3373070_+	NA	NA|342aa|down_5|NZ_CP007155.1_3373132_3374158_+	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	NA|329aa|down_6|NZ_CP007155.1_3374255_3375242_+	cd07725, TTHA1429-like_MBL-fold, uncharacterized Thermus thermophilus TTHA1429 and related proteins; MBL-fold metallo hydrolase domain	NA|170aa|down_7|NZ_CP007155.1_3375243_3375753_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|366aa|down_8|NZ_CP007155.1_3375868_3376966_+	TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E1 component, alpha subunit	NA|338aa|down_9|NZ_CP007155.1_3376967_3377981_+	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	7	3629719-3629812	6	CRISPRCasFinder	no		WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Orphan	GCGCATCAGTGCCAGCTCCACCTGG	25	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA,NA|141aa|down_6|NZ_CP007155.1_3637336_3637759_-	NA|214aa|up_9|NZ_CP007155.1_3609629_3610271_-	cd03024, DsbA_FrnE, DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif	NA|465aa|up_8|NZ_CP007155.1_3610362_3611757_+	cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins	NA|204aa|up_7|NZ_CP007155.1_3611926_3612538_+	pfam13185, GAF_2, GAF domain	NA|426aa|up_6|NZ_CP007155.1_3612449_3613727_-	cd09603, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain	NA|1286aa|up_5|NZ_CP007155.1_3613774_3617632_-	TIGR02353, NON-RIBOSOMAL_PEPTIDE_SYNTHETASE, non-ribosomal peptide synthetase terminal domain of unknown function	NA|263aa|up_4|NZ_CP007155.1_3617770_3618559_-	COG3327, PaaX, Phenylacetic acid-responsive transcriptional repressor [Transcription]	NA|812aa|up_3|NZ_CP007155.1_3618753_3621189_+	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism]	NA|119aa|up_2|NZ_CP007155.1_3621217_3621574_+	cd04458, CSP_CDS, Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea	NA|1452aa|up_1|NZ_CP007155.1_3621729_3626085_+	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	NA|350aa|up_0|NZ_CP007155.1_3626134_3627184_-	PRK07209, PRK07209, ribonucleotide-diphosphate reductase subunit beta; Validated	NA|499aa|down_0|NZ_CP007155.1_3630727_3632224_+	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|380aa|down_1|NZ_CP007155.1_3632229_3633369_+	cd01162, IBD, Isobutyryl-CoA dehydrogenase	NA|347aa|down_2|NZ_CP007155.1_3633368_3634409_+	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional	NA|275aa|down_3|NZ_CP007155.1_3634435_3635260_+	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase	NA|259aa|down_4|NZ_CP007155.1_3635256_3636033_+	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional	NA|367aa|down_5|NZ_CP007155.1_3636206_3637307_+	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|141aa|down_6|NZ_CP007155.1_3637336_3637759_-	NA	NA|420aa|down_7|NZ_CP007155.1_3637917_3639177_+	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|398aa|down_8|NZ_CP007155.1_3639327_3640521_+	cd19531, LCL_NRPS-like, LCL-type Condensation (C) domain of non-ribosomal peptide synthetases(NRPSs) and similar domains including the C-domain of SgcC5, a free-standing NRPS with both ester- and amide- bond forming activity	NA|192aa|down_9|NZ_CP007155.1_3640513_3641089_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	8	4180952-4181060	7	CRISPRCasFinder	no		WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Orphan	CGTCGTGAAGGGCACCTTCGTGACG	25	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA|331aa|up_4|NZ_CP007155.1_4174725_4175718_-,NA|333aa|up_3|NZ_CP007155.1_4175827_4176826_-,NA|70aa|up_1|NZ_CP007155.1_4178876_4179086_+,NA	NA|267aa|up_9|NZ_CP007155.1_4170020_4170821_-	TIGR03605, antibiot_sagB, SagB-type dehydrogenase domain	NA|259aa|up_8|NZ_CP007155.1_4170948_4171725_-	PRK07231, FabG-like, SDR family oxidoreductase	NA|288aa|up_7|NZ_CP007155.1_4171721_4172585_-	TIGR02406, L-24-diaminobutyric_acid_acetyltransferase, diaminobutyrate acetyltransferase	NA|434aa|up_6|NZ_CP007155.1_4172662_4173964_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|234aa|up_5|NZ_CP007155.1_4174011_4174713_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|331aa|up_4|NZ_CP007155.1_4174725_4175718_-	NA	NA|333aa|up_3|NZ_CP007155.1_4175827_4176826_-	NA	NA|543aa|up_2|NZ_CP007155.1_4177047_4178676_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|70aa|up_1|NZ_CP007155.1_4178876_4179086_+	NA	NA|542aa|up_0|NZ_CP007155.1_4179163_4180789_-	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|239aa|down_0|NZ_CP007155.1_4181089_4181806_-	PRK02947, PRK02947, sugar isomerase domain-containing protein	NA|252aa|down_1|NZ_CP007155.1_4181898_4182654_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|382aa|down_2|NZ_CP007155.1_4182646_4183792_+	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters	NA|503aa|down_3|NZ_CP007155.1_4183784_4185293_-	pfam00135, COesterase, Carboxylesterase family	NA|346aa|down_4|NZ_CP007155.1_4185298_4186336_-	COG4447, COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor [General function prediction only]	NA|189aa|down_5|NZ_CP007155.1_4186362_4186929_-	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function	NA|384aa|down_6|NZ_CP007155.1_4186939_4188091_-	pfam07470, Glyco_hydro_88, Glycosyl Hydrolase Family 88	NA|233aa|down_7|NZ_CP007155.1_4188178_4188877_-	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|212aa|down_8|NZ_CP007155.1_4188891_4189527_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|228aa|down_9|NZ_CP007155.1_4189534_4190218_-	pfam13761, DUF4166, Domain of unknown function (DUF4166)
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	9	4267690-4267838	8	CRISPRCasFinder	no		WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Orphan	CATGAAGGTGCCGTTGCGGACGTTGAACGTCATGAACGGCACCTTCCTGAC	51	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA|121aa|up_8|NZ_CP007155.1_4259912_4260275_+,NA|124aa|up_6|NZ_CP007155.1_4262003_4262375_-,NA|217aa|up_2|NZ_CP007155.1_4265360_4266011_-,NA|399aa|up_1|NZ_CP007155.1_4265943_4267140_-,NA|266aa|down_7|NZ_CP007155.1_4273813_4274611_-	NA|236aa|up_9|NZ_CP007155.1_4259140_4259848_+	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated	NA|121aa|up_8|NZ_CP007155.1_4259912_4260275_+	NA	NA|466aa|up_7|NZ_CP007155.1_4260436_4261834_-	pfam08386, Abhydrolase_4, TAP-like protein	NA|124aa|up_6|NZ_CP007155.1_4262003_4262375_-	NA	NA|338aa|up_5|NZ_CP007155.1_4262295_4263309_-	pfam13699, DUF4157, Domain of unknown function (DUF4157)	NA|203aa|up_4|NZ_CP007155.1_4263350_4263959_-	cd00405, PRAI, Phosphoribosylanthranilate isomerase (PRAI) catalyzes the fourth step of the tryptophan biosynthesis, the conversion of N-(5'- phosphoribosyl)-anthranilate (PRA) to 1-(o-carboxyphenylamino)- 1-deoxyribulose 5-phosphate (CdRP)	NA|394aa|up_3|NZ_CP007155.1_4264088_4265270_-	cd09216, GH64-LPHase-like, glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like	NA|217aa|up_2|NZ_CP007155.1_4265360_4266011_-	NA	NA|399aa|up_1|NZ_CP007155.1_4265943_4267140_-	NA	NA|143aa|up_0|NZ_CP007155.1_4267204_4267633_-	pfam04075, F420H2_quin_red, F420H(2)-dependent quinone reductase	NA|452aa|down_0|NZ_CP007155.1_4267839_4269195_-	pfam10009, DUF2252, Uncharacterized protein conserved in bacteria (DUF2252)	NA|335aa|down_1|NZ_CP007155.1_4269267_4270272_-	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]	NA|197aa|down_2|NZ_CP007155.1_4270337_4270928_+	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain	NA|169aa|down_3|NZ_CP007155.1_4271033_4271540_-	pfam13474, SnoaL_3, SnoaL-like domain	NA|212aa|down_4|NZ_CP007155.1_4271553_4272189_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|405aa|down_5|NZ_CP007155.1_4272338_4273553_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|65aa|down_6|NZ_CP007155.1_4273565_4273760_+	pfam06902, Fer4_19, Divergent 4Fe-4S mono-cluster	NA|266aa|down_7|NZ_CP007155.1_4273813_4274611_-	NA	NA|320aa|down_8|NZ_CP007155.1_4274607_4275567_-	PRK14851, PRK14851, hypothetical protein; Provisional	NA|228aa|down_9|NZ_CP007155.1_4275643_4276327_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	10	5022466-5022672	9	CRISPRCasFinder	no	csa3	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Type I-A	GGACCACCCCCGCGTACGCGGGGA	24	0	0	NA	NA	NA	3	3	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA,NA|255aa|down_9|NZ_CP007155.1_5033545_5034310_+	NA|356aa|up_9|NZ_CP007155.1_5013809_5014877_-	pfam02595, Gly_kinase, Glycerate kinase family	NA|565aa|up_8|NZ_CP007155.1_5014876_5016571_-	PRK11269, PRK11269, glyoxylate carboligase; Provisional	NA|290aa|up_7|NZ_CP007155.1_5016570_5017440_-	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]	NA|261aa|up_6|NZ_CP007155.1_5017436_5018219_-	TIGR03234, OH-pyruv-isom, hydroxypyruvate isomerase	NA|96aa|up_5|NZ_CP007155.1_5018529_5018817_+	pfam13309, HTH_22, HTH domain	NA|160aa|up_4|NZ_CP007155.1_5018872_5019352_+	PRK13798, PRK13798, putative OHCU decarboxylase; Provisional	NA|108aa|up_3|NZ_CP007155.1_5019348_5019672_+	pfam00576, Transthyretin, HIUase/Transthyretin family	NA|288aa|up_2|NZ_CP007155.1_5019674_5020538_+	TIGR03383, Structure_Of_Uricase, urate oxidase	NA|347aa|up_1|NZ_CP007155.1_5020568_5021609_-	pfam06441, EHN, Epoxide hydrolase N-terminus	NA|187aa|up_0|NZ_CP007155.1_5021646_5022207_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|156aa|down_0|NZ_CP007155.1_5023063_5023531_+	cd00464, SK, Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants	NA|157aa|down_1|NZ_CP007155.1_5023565_5024036_-	cd07826, SRPBCC_CalC_Aha1-like_9, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins	csa3|121aa|down_2|NZ_CP007155.1_5024004_5024367_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|1177aa|down_3|NZ_CP007155.1_5024471_5028002_+	COG4264, RhbC, Siderophore synthetase component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|390aa|down_4|NZ_CP007155.1_5027998_5029168_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|267aa|down_5|NZ_CP007155.1_5029157_5029958_-	PRK05855, PRK05855, SDR family oxidoreductase	NA|197aa|down_6|NZ_CP007155.1_5030054_5030645_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|522aa|down_7|NZ_CP007155.1_5030711_5032277_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|230aa|down_8|NZ_CP007155.1_5032283_5032973_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|255aa|down_9|NZ_CP007155.1_5033545_5034310_+	NA
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	11	5121424-5121502	10	CRISPRCasFinder	no		WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Orphan	AGCGCCAGCACGCCCTGGTTGGTCT	25	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA|52aa|up_1|NZ_CP007155.1_5118378_5118534_-,NA|151aa|down_7|NZ_CP007155.1_5128058_5128511_-	NA|375aa|up_9|NZ_CP007155.1_5109561_5110686_-	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|202aa|up_8|NZ_CP007155.1_5110755_5111361_-	pfam03358, FMN_red, NADPH-dependent FMN reductase	NA|200aa|up_7|NZ_CP007155.1_5111395_5111995_-	pfam00924, MS_channel, Mechanosensitive ion channel	NA|187aa|up_6|NZ_CP007155.1_5112068_5112629_+	cd12108, Hr-like, Hemerythrin-like domain	NA|648aa|up_5|NZ_CP007155.1_5113789_5115733_-	TIGR03062, hypothetical_protein_lp_1332, YhgE/Pip C-terminal domain	NA|201aa|up_4|NZ_CP007155.1_5115729_5116332_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|174aa|up_3|NZ_CP007155.1_5117066_5117588_+	smart01012, ANTAR, ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins	NA|259aa|up_2|NZ_CP007155.1_5117591_5118368_+	pfam03861, ANTAR, ANTAR domain	NA|52aa|up_1|NZ_CP007155.1_5118378_5118534_-	NA	NA|522aa|up_0|NZ_CP007155.1_5118735_5120301_-	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|346aa|down_0|NZ_CP007155.1_5122033_5123071_-	cd16934, HATPase_RsbT-like, Histidine kinase-like ATPase domain of the anti sigma-B factor Bacillus subtilis serine/threonine-protein kinase RsbT, and related domains	NA|138aa|down_1|NZ_CP007155.1_5123076_5123490_-	cd16934, HATPase_RsbT-like, Histidine kinase-like ATPase domain of the anti sigma-B factor Bacillus subtilis serine/threonine-protein kinase RsbT, and related domains	NA|138aa|down_2|NZ_CP007155.1_5123486_5123900_-	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation	NA|286aa|down_3|NZ_CP007155.1_5123899_5124757_-	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation	NA|226aa|down_4|NZ_CP007155.1_5124844_5125522_-	cd04192, GT_2_like_e, Subfamily of Glycosyltransferase Family GT2 of unknown function	NA|407aa|down_5|NZ_CP007155.1_5125518_5126739_-	COG2120, COG2120, Uncharacterized proteins, LmbE homologs [Function unknown]	NA|62aa|down_6|NZ_CP007155.1_5127788_5127974_+	pfam05532, CsbD, CsbD-like	NA|151aa|down_7|NZ_CP007155.1_5128058_5128511_-	NA	NA|550aa|down_8|NZ_CP007155.1_5128503_5130153_-	cd01662, Ubiquinol_Oxidase_I, Ubiquinol oxidase subunit I	NA|597aa|down_9|NZ_CP007155.1_5130152_5131943_-	PRK08273, PRK08273, thiamine pyrophosphate protein; Provisional
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	12	6136056-6136204	11	CRISPRCasFinder	no		WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Orphan	GGACCACCCCCGCTCACGCGAGGAAGA	27	0	0	NA	NA	NA	2	2	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA|129aa|up_8|NZ_CP007155.1_6127048_6127435_+,NA|72aa|up_7|NZ_CP007155.1_6127690_6127906_+,NA|74aa|up_5|NZ_CP007155.1_6131535_6131757_+,NA|124aa|up_1|NZ_CP007155.1_6134658_6135030_-,NA|237aa|up_0|NZ_CP007155.1_6135042_6135753_-,NA|243aa|down_9|NZ_CP007155.1_6146813_6147542_-	NA|311aa|up_9|NZ_CP007155.1_6125874_6126807_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|129aa|up_8|NZ_CP007155.1_6127048_6127435_+	NA	NA|72aa|up_7|NZ_CP007155.1_6127690_6127906_+	NA	NA|482aa|up_6|NZ_CP007155.1_6129466_6130912_-	cd09603, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain	NA|74aa|up_5|NZ_CP007155.1_6131535_6131757_+	NA	NA|133aa|up_4|NZ_CP007155.1_6132004_6132403_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|280aa|up_3|NZ_CP007155.1_6132494_6133334_+	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs	NA|225aa|up_2|NZ_CP007155.1_6133937_6134612_-	pfam13539, Peptidase_M15_4, D-alanyl-D-alanine carboxypeptidase	NA|124aa|up_1|NZ_CP007155.1_6134658_6135030_-	NA	NA|237aa|up_0|NZ_CP007155.1_6135042_6135753_-	NA	NA|140aa|down_0|NZ_CP007155.1_6136664_6137084_-	COG1846, MarR, Transcriptional regulators [Transcription]	NA|294aa|down_1|NZ_CP007155.1_6137099_6137981_+	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|306aa|down_2|NZ_CP007155.1_6138772_6139690_+	TIGR02320, Phosphoenolpyruvate_phosphomutase, phosphoenolpyruvate mutase	NA|383aa|down_3|NZ_CP007155.1_6139788_6140937_+	PRK11858, aksA, trans-homoaconitate synthase; Reviewed	NA|403aa|down_4|NZ_CP007155.1_6141025_6142234_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|769aa|down_5|NZ_CP007155.1_6142311_6144618_+	COG5635, COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms]	NA|311aa|down_6|NZ_CP007155.1_6144618_6145551_-	cd08576, GDPD_like_SMaseD_PLD, Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins	NA|114aa|down_7|NZ_CP007155.1_6145803_6146145_-	cd16917, HATPase_UhpB-NarQ-NarX-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli UhpB, NarQ and NarX, and Bacillus subtilis YdfH, YhcY and YfiJ	NA|144aa|down_8|NZ_CP007155.1_6146385_6146817_+	cd01107, HTH_BmrR, Helix-Turn-Helix DNA binding domain of the BmrR transcription regulator	NA|243aa|down_9|NZ_CP007155.1_6146813_6147542_-	NA
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	13	6148517-6148858	2,12,1	CRT,CRISPRCasFinder,PILER-CR	no		WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Orphan	GGACCATCCCCGCGTGCGCGGGGAAGAC,GGGACCATCCCCGCGTGCGCGGGGAAGAC,GGACCATCCCCGCGTGCGCGGGGAAGAC	28,29,28	0	0	NA	NA	I-C,I-E,II-B:I-C,I-E,II-B:I-C,I-E,II-B	5,4,4	5	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA|243aa|up_1|NZ_CP007155.1_6146813_6147542_-,NA|47aa|down_9|NZ_CP007155.1_6159724_6159865_+	NA|294aa|up_9|NZ_CP007155.1_6137099_6137981_+	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|306aa|up_8|NZ_CP007155.1_6138772_6139690_+	TIGR02320, Phosphoenolpyruvate_phosphomutase, phosphoenolpyruvate mutase	NA|383aa|up_7|NZ_CP007155.1_6139788_6140937_+	PRK11858, aksA, trans-homoaconitate synthase; Reviewed	NA|403aa|up_6|NZ_CP007155.1_6141025_6142234_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|769aa|up_5|NZ_CP007155.1_6142311_6144618_+	COG5635, COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms]	NA|311aa|up_4|NZ_CP007155.1_6144618_6145551_-	cd08576, GDPD_like_SMaseD_PLD, Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins	NA|114aa|up_3|NZ_CP007155.1_6145803_6146145_-	cd16917, HATPase_UhpB-NarQ-NarX-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli UhpB, NarQ and NarX, and Bacillus subtilis YdfH, YhcY and YfiJ	NA|144aa|up_2|NZ_CP007155.1_6146385_6146817_+	cd01107, HTH_BmrR, Helix-Turn-Helix DNA binding domain of the BmrR transcription regulator	NA|243aa|up_1|NZ_CP007155.1_6146813_6147542_-	NA	NA|188aa|up_0|NZ_CP007155.1_6147927_6148491_+	pfam02031, Peptidase_M7, Streptomyces extracellular neutral proteinase (M7) family	NA|375aa|down_0|NZ_CP007155.1_6149496_6150621_+	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller	NA|512aa|down_1|NZ_CP007155.1_6150702_6152238_-	TIGR03494, Isochorismate_synthase/isochorismate_lyase, salicylate synthase	NA|530aa|down_2|NZ_CP007155.1_6152268_6153858_-	COG1021, EntE, Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|444aa|down_3|NZ_CP007155.1_6153854_6155186_-	cd19533, starter-C_NRPS, Starter Condensation domains, found in the first module of nonribosomal peptide synthetases (NRPSs)	NA|438aa|down_4|NZ_CP007155.1_6155211_6156525_-	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family	NA|260aa|down_5|NZ_CP007155.1_6156521_6157301_-	TIGR04448, creatininase, creatininase	NA|288aa|down_6|NZ_CP007155.1_6157300_6158164_-	cd02810, DHOD_DHPD_FMN, Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain	NA|173aa|down_7|NZ_CP007155.1_6158213_6158732_-	pfam05014, Nuc_deoxyrib_tr, Nucleoside 2-deoxyribosyltransferase	NA|62aa|down_8|NZ_CP007155.1_6159093_6159279_+	pfam13586, DDE_Tnp_1_2, Transposase DDE domain	NA|47aa|down_9|NZ_CP007155.1_6159724_6159865_+	NA
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	14	6803553-6803713	13	CRISPRCasFinder	no		WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Orphan	CCGACACACCATCCCGCAACGTCCGACAC	29	1	4	6803648-6803684|6803648-6803684|6803648-6803684|6803648-6803684	NZ_CP007155.1_3204263-3204299|NZ_CP007155.1_3406789-3406825|NZ_CP007155.1_2950898-2950862|NZ_CP007155.1_6585596-6585632	NA	2	2	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA|285aa|up_7|NZ_CP007155.1_6796397_6797252_-,NA|140aa|up_6|NZ_CP007155.1_6798007_6798427_+,NA|264aa|up_3|NZ_CP007155.1_6799474_6800266_-,NA|450aa|down_2|NZ_CP007155.1_6805827_6807177_-,NA|428aa|down_3|NZ_CP007155.1_6807173_6808457_-	NA|215aa|up_9|NZ_CP007155.1_6793135_6793780_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|495aa|up_8|NZ_CP007155.1_6793880_6795365_+	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|285aa|up_7|NZ_CP007155.1_6796397_6797252_-	NA	NA|140aa|up_6|NZ_CP007155.1_6798007_6798427_+	NA	NA|154aa|up_5|NZ_CP007155.1_6798404_6798866_-	PRK02487, PRK02487, heme-degrading domain-containing protein	NA|149aa|up_4|NZ_CP007155.1_6798979_6799426_+	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD	NA|264aa|up_3|NZ_CP007155.1_6799474_6800266_-	NA	NA|197aa|up_2|NZ_CP007155.1_6800271_6800862_-	pfam12385, Peptidase_C70, Papain-like cysteine protease AvrRpt2	NA|374aa|up_1|NZ_CP007155.1_6800981_6802103_-	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]	NA|276aa|up_0|NZ_CP007155.1_6802107_6802935_-	pfam02720, DUF222, Domain of unknown function (DUF222)	NA|313aa|down_0|NZ_CP007155.1_6804143_6805082_-	cd07564, nitrilases_CHs, Nitrilases, cyanide hydratase (CH)s, and similar proteins (class 1 nitrilases)	NA|231aa|down_1|NZ_CP007155.1_6805099_6805792_-	COG3629, DnrI, DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms]	NA|450aa|down_2|NZ_CP007155.1_6805827_6807177_-	NA	NA|428aa|down_3|NZ_CP007155.1_6807173_6808457_-	NA	NA|636aa|down_4|NZ_CP007155.1_6808453_6810361_-	COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones]	NA|518aa|down_5|NZ_CP007155.1_6810429_6811983_-	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau	NA|674aa|down_6|NZ_CP007155.1_6811979_6814001_-	TIGR02242, putative_secreted_protein, phage tail protein domain	NA|714aa|down_7|NZ_CP007155.1_6814000_6816142_-	TIGR02243, hypothetical_protein_SCD8A	NA|129aa|down_8|NZ_CP007155.1_6816161_6816548_-	pfam04965, GPW_gp25, Gene 25-like lysozyme	NA|404aa|down_9|NZ_CP007155.1_6816614_6817826_+	pfam13699, DUF4157, Domain of unknown function (DUF4157)
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	15	6967319-6967473	14	CRISPRCasFinder	no		WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Orphan	CGGGACTCGGCTGCGGCAGAGCGGGACTC	29	0	0	NA	NA	NA	2	2	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA|52aa|up_1|NZ_CP007155.1_6964098_6964254_-,NA|296aa|down_0|NZ_CP007155.1_6967519_6968407_-,NA|66aa|down_1|NZ_CP007155.1_6968403_6968601_-	NA|1239aa|up_9|NZ_CP007155.1_6951156_6954873_+	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	NA|216aa|up_8|NZ_CP007155.1_6954938_6955586_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|326aa|up_7|NZ_CP007155.1_6955605_6956583_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|503aa|up_6|NZ_CP007155.1_6957129_6958638_+	cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD	NA|390aa|up_5|NZ_CP007155.1_6958630_6959800_+	cd01151, GCD, Glutaryl-CoA dehydrogenase	NA|399aa|up_4|NZ_CP007155.1_6960511_6961708_-	PRK08177, PRK08177, SDR family oxidoreductase	NA|327aa|up_3|NZ_CP007155.1_6961756_6962737_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|148aa|up_2|NZ_CP007155.1_6963277_6963721_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|52aa|up_1|NZ_CP007155.1_6964098_6964254_-	NA	NA|865aa|up_0|NZ_CP007155.1_6964692_6967287_+	PRK06241, PRK06241, phosphoenolpyruvate synthase; Validated	NA|296aa|down_0|NZ_CP007155.1_6967519_6968407_-	NA	NA|66aa|down_1|NZ_CP007155.1_6968403_6968601_-	NA	NA|497aa|down_2|NZ_CP007155.1_6968625_6970116_-	pfam00135, COesterase, Carboxylesterase family	NA|212aa|down_3|NZ_CP007155.1_6970130_6970766_-	cd00421, intradiol_dioxygenase, Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates	NA|322aa|down_4|NZ_CP007155.1_6970893_6971859_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|198aa|down_5|NZ_CP007155.1_6971835_6972429_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|448aa|down_6|NZ_CP007155.1_6972512_6973856_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|486aa|down_7|NZ_CP007155.1_6973849_6975307_-	pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hydrolase	NA|146aa|down_8|NZ_CP007155.1_6975535_6975973_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|115aa|down_9|NZ_CP007155.1_6976028_6976373_-	pfam11774, Lsr2, Lsr2
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	16	7143595-7143828	2,15	PILER-CR,CRISPRCasFinder	no		WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Orphan	GCCCCGGCACTGCCACGAAGGTGCCCTTTGCGACGCTCAACGTCCCGAACGG,CGCCCCGGCACTGCCACGAAGGTGCC	52,26	0	0	NA	NA	NA:NA	2,1	2	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA,NA|60aa|down_2|NZ_CP007155.1_7148267_7148447_-,NA|68aa|down_3|NZ_CP007155.1_7148506_7148710_-,NA|562aa|down_5|NZ_CP007155.1_7149978_7151664_-,NA|48aa|down_9|NZ_CP007155.1_7157160_7157304_-	NA|181aa|up_9|NZ_CP007155.1_7129646_7130189_+	pfam02031, Peptidase_M7, Streptomyces extracellular neutral proteinase (M7) family	NA|479aa|up_8|NZ_CP007155.1_7130270_7131707_-	pfam00135, COesterase, Carboxylesterase family	NA|316aa|up_7|NZ_CP007155.1_7131708_7132656_-	cd08153, srpA_like, Catalase-like heme-binding proteins similar to the uncharacterized srpA	NA|288aa|up_6|NZ_CP007155.1_7132777_7133641_-	PRK08317, PRK08317, hypothetical protein; Provisional	NA|408aa|up_5|NZ_CP007155.1_7133948_7135172_+	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain	NA|576aa|up_4|NZ_CP007155.1_7135602_7137330_-	cd05931, FAAL, Fatty acyl-AMP ligase (FAAL)	NA|368aa|up_3|NZ_CP007155.1_7137665_7138769_+	cd05304, Rubrum_tdh, Rubrum transdehydrogenase NAD-binding and catalytic domains	NA|93aa|up_2|NZ_CP007155.1_7138765_7139044_+	pfam12769, PNTB_4TM, 4TM region of pyridine nucleotide transhydrogenase, mitoch	NA|459aa|up_1|NZ_CP007155.1_7139040_7140417_+	pfam02233, PNTB, NAD(P) transhydrogenase beta subunit	NA|337aa|up_0|NZ_CP007155.1_7140397_7141408_-	PRK12287, tqsA, pheromone autoinducer 2 transporter; Reviewed	NA|246aa|down_0|NZ_CP007155.1_7143941_7144679_+	smart00020, Tryp_SPc, Trypsin-like serine protease	NA|1107aa|down_1|NZ_CP007155.1_7144725_7148046_-	cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1	NA|60aa|down_2|NZ_CP007155.1_7148267_7148447_-	NA	NA|68aa|down_3|NZ_CP007155.1_7148506_7148710_-	NA	NA|410aa|down_4|NZ_CP007155.1_7148736_7149966_-	pfam04143, Sulf_transp, Sulphur transport	NA|562aa|down_5|NZ_CP007155.1_7149978_7151664_-	NA	NA|608aa|down_6|NZ_CP007155.1_7151719_7153543_-	pfam05694, SBP56, 56kDa selenium binding protein (SBP56)	NA|633aa|down_7|NZ_CP007155.1_7153981_7155880_-	cd14792, GH27, glycosyl hydrolase family 27 (GH27)	NA|346aa|down_8|NZ_CP007155.1_7156145_7157183_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|48aa|down_9|NZ_CP007155.1_7157160_7157304_-	NA
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	17	7342601-7342750	16	CRISPRCasFinder	no		WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Orphan	GTGTTCCCCGCACGAGCGGGGGTGGTCC	28	0	0	NA	NA	I-C,I-E,II-B	2	2	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA|207aa|up_7|NZ_CP007155.1_7335483_7336104_+,NA|149aa|down_3|NZ_CP007155.1_7345841_7346288_+,NA|99aa|down_6|NZ_CP007155.1_7349416_7349713_-	NA|1091aa|up_9|NZ_CP007155.1_7327564_7330837_+	pfam12770, CHAT, CHAT domain	NA|1432aa|up_8|NZ_CP007155.1_7331144_7335440_+	pfam05729, NACHT, NACHT domain	NA|207aa|up_7|NZ_CP007155.1_7335483_7336104_+	NA	NA|201aa|up_6|NZ_CP007155.1_7336230_7336833_-	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|373aa|up_5|NZ_CP007155.1_7337007_7338126_-	cd04747, OYE_like_5_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 5	NA|199aa|up_4|NZ_CP007155.1_7338231_7338828_-	pfam11706, zf-CGNR, CGNR zinc finger	NA|152aa|up_3|NZ_CP007155.1_7338912_7339368_+	PRK00203, rnhA, ribonuclease H; Reviewed	NA|210aa|up_2|NZ_CP007155.1_7339439_7340069_+	PRK05812, secD, preprotein translocase subunit SecD; Reviewed	NA|487aa|up_1|NZ_CP007155.1_7340432_7341893_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|212aa|up_0|NZ_CP007155.1_7341892_7342528_+	PHA03100, PHA03100, ankyrin repeat protein; Provisional	NA|203aa|down_0|NZ_CP007155.1_7342786_7343395_-	TIGR03968, transcriptional_regulator_TetR_family, mycofactocin system transcriptional regulator	NA|391aa|down_1|NZ_CP007155.1_7343465_7344638_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|270aa|down_2|NZ_CP007155.1_7344693_7345503_-	cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16	NA|149aa|down_3|NZ_CP007155.1_7345841_7346288_+	NA	NA|815aa|down_4|NZ_CP007155.1_7346478_7348923_+	pfam12770, CHAT, CHAT domain	NA|146aa|down_5|NZ_CP007155.1_7348986_7349424_+	pfam04075, F420H2_quin_red, F420H(2)-dependent quinone reductase	NA|99aa|down_6|NZ_CP007155.1_7349416_7349713_-	NA	NA|250aa|down_7|NZ_CP007155.1_7349702_7350452_-	pfam09859, Oxygenase-NA, Oxygenase, catalyzing oxidative methylation of damaged DNA	NA|222aa|down_8|NZ_CP007155.1_7350486_7351152_+	cd00317, cyclophilin, cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases	NA|401aa|down_9|NZ_CP007155.1_7351225_7352428_+	cd03784, GT1_Gtf-like, UDP-glycosyltransferases and similar proteins
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	18	7622909-7622989	17	CRISPRCasFinder	no		WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Orphan	GTGATAACACCACCACGCTCCGC	23	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA|164aa|up_9|NZ_CP007155.1_7613324_7613816_-,NA|110aa|up_6|NZ_CP007155.1_7615202_7615532_+,NA	NA|164aa|up_9|NZ_CP007155.1_7613324_7613816_-	NA	NA|221aa|up_8|NZ_CP007155.1_7613925_7614588_-	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|133aa|up_7|NZ_CP007155.1_7614713_7615112_+	pfam08239, SH3_3, Bacterial SH3 domain	NA|110aa|up_6|NZ_CP007155.1_7615202_7615532_+	NA	NA|949aa|up_5|NZ_CP007155.1_7615533_7618380_-	COG3899, COG3899, Predicted ATPase [General function prediction only]	NA|354aa|up_4|NZ_CP007155.1_7618526_7619588_+	smart00020, Tryp_SPc, Trypsin-like serine protease	NA|383aa|up_3|NZ_CP007155.1_7619600_7620749_+	cd04056, Peptidases_S53, Peptidase domain in the S53 family	NA|175aa|up_2|NZ_CP007155.1_7620767_7621292_-	PRK00117, recX, recombination regulator RecX; Reviewed	NA|348aa|up_1|NZ_CP007155.1_7621299_7622343_-	PRK09354, recA, recombinase A; Provisional	NA|65aa|up_0|NZ_CP007155.1_7622518_7622713_-	pfam11248, DUF3046, Protein of unknown function (DUF3046)	NA|197aa|down_0|NZ_CP007155.1_7623332_7623923_+	pfam04961, FTCD_C, Formiminotransferase-cyclodeaminase	NA|274aa|down_1|NZ_CP007155.1_7623919_7624741_+	COG0190, FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]	NA|245aa|down_2|NZ_CP007155.1_7624785_7625520_-	pfam09490, CbtA, Probable cobalt transporter subunit (CbtA)	NA|72aa|down_3|NZ_CP007155.1_7625539_7625755_-	pfam09489, CbtB, Probable cobalt transporter subunit (CbtB)	NA|194aa|down_4|NZ_CP007155.1_7625958_7626540_+	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|662aa|down_5|NZ_CP007155.1_7626641_7628627_-	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]	NA|410aa|down_6|NZ_CP007155.1_7628758_7629988_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|609aa|down_7|NZ_CP007155.1_7630050_7631877_-	cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family	NA|422aa|down_8|NZ_CP007155.1_7631927_7633193_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|199aa|down_9|NZ_CP007155.1_7633252_7633849_-	PRK09648, PRK09648, RNA polymerase sigma factor ShbA
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	19	7994321-7994432	18	CRISPRCasFinder	no		WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Orphan	GTCACGAAGGTGCCCTTCACGACGTTG	27	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA|124aa|up_2|NZ_CP007155.1_7989760_7990132_-,NA|228aa|down_4|NZ_CP007155.1_7997218_7997902_-	NA|264aa|up_9|NZ_CP007155.1_7983711_7984503_-	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional	NA|407aa|up_8|NZ_CP007155.1_7984499_7985720_-	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated	NA|270aa|up_7|NZ_CP007155.1_7985739_7986549_-	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC	NA|181aa|up_6|NZ_CP007155.1_7986676_7987219_-	pfam09534, Trp_oprn_chp, Tryptophan-associated transmembrane protein (Trp_oprn_chp)	NA|511aa|up_5|NZ_CP007155.1_7987211_7988744_-	PRK13571, PRK13571, anthranilate synthase component I; Provisional	NA|199aa|up_4|NZ_CP007155.1_7988823_7989420_+	pfam17920, TetR_C_16, Tetracyclin repressor-like, C-terminal domain	NA|125aa|up_3|NZ_CP007155.1_7989389_7989764_-	PRK00051, hisI, phosphoribosyl-AMP cyclohydrolase; Reviewed	NA|124aa|up_2|NZ_CP007155.1_7989760_7990132_-	NA	NA|258aa|up_1|NZ_CP007155.1_7990128_7990902_-	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional	NA|999aa|up_0|NZ_CP007155.1_7991261_7994258_-	pfam05729, NACHT, NACHT domain	NA|130aa|down_0|NZ_CP007155.1_7994503_7994893_+	TIGR03666, Rv2061_F420, PPOX class probable F420-dependent enzyme, Rv2061 family	NA|246aa|down_1|NZ_CP007155.1_7994947_7995685_+	CHL00095, clpC, Clp protease ATP binding subunit	NA|246aa|down_2|NZ_CP007155.1_7995644_7996382_-	PRK14024, PRK14024, phosphoribosyl isomerase A; Provisional	NA|211aa|down_3|NZ_CP007155.1_7996404_7997037_-	PRK13146, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional	NA|228aa|down_4|NZ_CP007155.1_7997218_7997902_-	NA	NA|296aa|down_5|NZ_CP007155.1_7997929_7998817_-	cd07033, TPP_PYR_DXS_TK_like, Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins	NA|213aa|down_6|NZ_CP007155.1_7998830_7999469_-	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates	NA|155aa|down_7|NZ_CP007155.1_7999563_8000028_+	cd01110, HTH_SoxR, Helix-Turn-Helix DNA binding domain of the SoxR transcription regulator	NA|303aa|down_8|NZ_CP007155.1_8000139_8001048_+	COG2423, COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]	NA|177aa|down_9|NZ_CP007155.1_8001082_8001613_+	PRK00819, PRK00819, RNA 2'-phosphotransferase; Reviewed
GCF_000525635.1_ASM52563v1	NZ_CP007155	Kutzneria albida DSM 43870 chromosome, complete genome	20	9567895-9568001	19	CRISPRCasFinder	no		WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	Orphan	GCCCGCCGGGGGGACACCCCCGGACC	26	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas4,casR,RT	NA|132aa|up_3|NZ_CP007155.1_9563365_9563761_-,NA	NA|333aa|up_9|NZ_CP007155.1_9556968_9557967_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|498aa|up_8|NZ_CP007155.1_9557977_9559471_+	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|132aa|up_7|NZ_CP007155.1_9559523_9559919_-	smart00287, SH3b, Bacterial SH3 domain homologues	NA|143aa|up_6|NZ_CP007155.1_9560143_9560572_-	PRK09256, PRK09256, aminoacyl-tRNA hydrolase	NA|360aa|up_5|NZ_CP007155.1_9560571_9561651_-	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|512aa|up_4|NZ_CP007155.1_9561692_9563228_-	PRK07847, PRK07847, amidophosphoribosyltransferase; Provisional	NA|132aa|up_3|NZ_CP007155.1_9563365_9563761_-	NA	NA|127aa|up_2|NZ_CP007155.1_9563887_9564268_-	pfam17844, SCP_3, Bacterial SCP ortholog	NA|887aa|up_1|NZ_CP007155.1_9564390_9567051_+	pfam18368, Ig_GlcNase, Exo-beta-D-glucosaminidase Ig-fold domain	NA|193aa|up_0|NZ_CP007155.1_9567269_9567848_+	PRK10401, PRK10401, HTH-type transcriptional regulator GalS	NA|621aa|down_0|NZ_CP007155.1_9568025_9569888_+	COG3387, SGA1, Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|348aa|down_1|NZ_CP007155.1_9569884_9570928_+	cd08230, glucose_DH, Glucose dehydrogenase	NA|684aa|down_2|NZ_CP007155.1_9571269_9573321_-	cd01948, EAL, EAL domain	NA|281aa|down_3|NZ_CP007155.1_9573422_9574265_-	pfam04672, Methyltransf_19, S-adenosyl methyltransferase	NA|274aa|down_4|NZ_CP007155.1_9574342_9575164_-	pfam04672, Methyltransf_19, S-adenosyl methyltransferase	NA|307aa|down_5|NZ_CP007155.1_9575318_9576239_+	pfam13576, Pentapeptide_3, Pentapeptide repeats (9 copies)	NA|308aa|down_6|NZ_CP007155.1_9576168_9577092_-	cd08436, PBP2_LTTR_like_3, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|287aa|down_7|NZ_CP007155.1_9577205_9578066_+	cd19088, AKR_AKR13B1, AKR13B family of aldo-keto reductase (AKR)	NA|266aa|down_8|NZ_CP007155.1_9578186_9578984_+	cd06412, GH25_CH-type, CH-type (Chalaropsis-type) lysozymes represent one of four functionally-defined classes of peptidoglycan hydrolases (also referred to as endo-N-acetylmuramidases) that cleave bacterial cell wall peptidoglycans	NA|286aa|down_9|NZ_CP007155.1_9579187_9580045_+	cd06412, GH25_CH-type, CH-type (Chalaropsis-type) lysozymes represent one of four functionally-defined classes of peptidoglycan hydrolases (also referred to as endo-N-acetylmuramidases) that cleave bacterial cell wall peptidoglycans
