The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP006850	Nocardia nova SH22a chromosome, complete genome	8348532	195660	203521	8348532		Saccharomonospora_phage(16.67%)	8	NA	NA
WP_025346528.1|195660_196521_+	helix-turn-helix domain-containing protein	NA	I4AZQ1	Saccharomonospora_phage	32.0	5.5e-21
WP_025346529.1|196567_197026_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_025346530.1|197112_198588_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	35.0	2.6e-55
WP_025346531.1|198673_199231_-	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	NA	H9NC63	Sphingomonas_phage	37.8	1.3e-15
WP_025346532.1|199232_200144_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	55.7	5.0e-89
WP_025346533.1|200378_201395_+	alpha/beta hydrolase	NA	J3IZC7	Acanthamoeba_polyphaga_lentillevirus	26.5	6.7e-18
WP_025346534.1|201516_202224_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025346535.1|202519_203521_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	43.6	6.7e-71
>prophage 2
NZ_CP006850	Nocardia nova SH22a chromosome, complete genome	8348532	1958344	1986306	8348532	head,capsid,tail,integrase,protease,terminase,portal	Gordonia_phage(57.89%)	46	1951098:1951113	1983099:1983114
1951098:1951113	attL	TGCCGCCGGTGCCGCC	NA	NA	NA	NA
WP_148306769.1|1958344_1959562_+|integrase	site-specific integrase	integrase	A0A2K9VH95	Gordonia_phage	39.1	7.9e-66
WP_148306770.1|1959745_1960111_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348056.1|1960051_1960345_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_148306771.1|1960475_1960703_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_025348057.1|1960699_1960972_+	helix-turn-helix domain-containing protein	NA	A0A1X9SHG1	Mycobacterium_phage	40.0	2.8e-08
WP_025348058.1|1961087_1961282_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348059.1|1961278_1961551_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348060.1|1961547_1961841_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348061.1|1961833_1962031_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348062.1|1962027_1962339_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348063.1|1962442_1962712_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348064.1|1962708_1963686_+	phage Gp37/Gp68 family protein	NA	A0A1B3B1W9	Gordonia_phage	48.9	2.2e-82
WP_148306772.1|1963682_1964069_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_148306773.1|1964412_1965192_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348067.1|1965191_1965542_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348068.1|1965538_1965805_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348069.1|1965801_1966011_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348070.1|1966003_1966456_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348071.1|1966448_1967057_+	hypothetical protein	NA	A0A159B6S5	Tsukamurella_phage	69.8	1.6e-11
WP_025348072.1|1967049_1967304_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348073.1|1967300_1967633_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158436173.1|1967625_1967778_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348074.1|1967774_1968203_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348075.1|1968199_1968514_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348076.1|1968510_1969176_+	hypothetical protein	NA	H6WSK2	Mycobacterium_phage	48.5	1.2e-44
WP_148306774.1|1969740_1969944_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348078.1|1970074_1970266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081769172.1|1970268_1970607_+	HNH endonuclease	NA	H9YSB8	environmental_Halophage	48.4	6.2e-05
WP_025348080.1|1970726_1971209_+|terminase	phage terminase small subunit P27 family	terminase	A0A1B3B1V2	Gordonia_phage	68.9	9.7e-52
WP_025348081.1|1971189_1972938_+|terminase	terminase large subunit	terminase	A0A1B3AYP7	Gordonia_phage	74.3	1.2e-248
WP_158436175.1|1972985_1973150_+	hypothetical protein	NA	A0A222ZEQ3	Arthrobacter_phage	45.5	4.6e-06
WP_025348082.1|1973149_1974430_+|portal	phage portal protein	portal	A0A142K7D9	Mycobacterium_phage	66.7	7.8e-165
WP_025348083.1|1974426_1975218_+|head,protease	HK97 family phage prohead protease	head,protease	A0A1U9WRZ1	Gordonia_phage	60.4	4.6e-67
WP_038550376.1|1975246_1976563_+|capsid	phage major capsid protein	capsid	W0LJX9	Mycobacterium_phage	63.4	4.7e-141
WP_148306775.1|1976631_1976829_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348086.1|1976825_1977368_+	hypothetical protein	NA	A0A2H4P9V1	Gordonia_phage	41.7	1.5e-24
WP_025348087.1|1977364_1977670_+	hypothetical protein	NA	A0A2H4P9W7	Gordonia_phage	46.5	2.6e-18
WP_025348088.1|1977672_1977924_+	hypothetical protein	NA	A0A1C9EHQ0	Gordonia_phage	42.7	8.4e-07
WP_025348089.1|1977920_1978325_+	hypothetical protein	NA	A0A2H4PA61	Gordonia_phage	44.5	1.1e-16
WP_025348090.1|1978345_1978663_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348091.1|1978668_1979208_+	hypothetical protein	NA	A0A023ZYD0	Mycobacterium_phage	35.8	5.3e-22
WP_025348092.1|1979309_1979696_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348093.1|1979725_1980166_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025348094.1|1980155_1983770_+|tail	phage tail tape measure protein	tail	A0A142K8Q7	Gordonia_phage	30.9	1.2e-66
1983099:1983114	attR	GGCGGCACCGGCGGCA	NA	NA	NA	NA
WP_025348095.1|1983766_1984663_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081769660.1|1984698_1986306_+|tail	phage tail protein	tail	A0A166Y911	Gordonia_phage	41.0	1.3e-113
>prophage 3
NZ_CP006850	Nocardia nova SH22a chromosome, complete genome	8348532	2145400	2155333	8348532		Bacillus_virus(16.67%)	11	NA	NA
WP_025348244.1|2145400_2146243_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	55.1	5.1e-80
WP_025348245.1|2146252_2146855_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_025348246.1|2147079_2147646_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	36.3	5.4e-09
WP_025348247.1|2147806_2147929_+	50S ribosomal protein L36	NA	NA	NA	NA	NA
WP_025348248.1|2148464_2148698_+	redoxin NrdH	NA	V5UN81	Mycobacterium_phage	63.6	1.7e-22
WP_051494661.1|2148740_2149244_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A217ER62	Bacillus_phage	29.5	2.1e-09
WP_193365200.1|2149195_2151385_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	51.5	7.5e-208
WP_025348251.1|2151505_2151757_+	Arc family DNA-binding protein	NA	NA	NA	NA	NA
WP_025348252.1|2151753_2152173_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_038552522.1|2152768_2154091_+	magnesium transporter	NA	NA	NA	NA	NA
WP_025348254.1|2154370_2155333_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A0N7CCA3	Skermania_phage	89.4	1.6e-162
>prophage 4
NZ_CP006850	Nocardia nova SH22a chromosome, complete genome	8348532	6513303	6519202	8348532		Mycobacterium_phage(28.57%)	11	NA	NA
WP_025352130.1|6513303_6513609_+	glutaredoxin family protein	NA	G9FGZ9	Rhodococcus_phage	53.1	8.7e-22
WP_025352131.1|6513601_6514243_+	hypothetical protein	NA	A0A249XTW9	Mycobacterium_phage	42.6	1.3e-35
WP_148307002.1|6514235_6514640_+	hypothetical protein	NA	NA	NA	NA	NA
WP_148307003.1|6514632_6515241_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025352134.1|6515233_6515791_+	3'-5' exoribonuclease	NA	A0A249XQ39	Mycobacterium_phage	61.0	1.9e-59
WP_081769509.1|6515787_6516270_+	DUF2493 domain-containing protein	NA	A0A1I9SDK9	Streptomyces_phage	39.0	2.0e-12
WP_025352136.1|6516266_6517022_+	hypothetical protein	NA	A0A142K9M4	Gordonia_phage	42.0	2.5e-09
WP_025352137.1|6517014_6517863_+	hypothetical protein	NA	NA	NA	NA	NA
WP_148307004.1|6517855_6518494_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025352139.1|6518490_6518859_+	hypothetical protein	NA	A0A191SAX1	Nostoc_phage	38.8	1.8e-05
WP_025352140.1|6518851_6519202_+	HIT domain-containing protein	NA	G8I9U4	Mycobacterium_virus	44.6	3.7e-16
>prophage 5
NZ_CP006850	Nocardia nova SH22a chromosome, complete genome	8348532	6524070	6535969	8348532		Mycobacterium_phage(30.0%)	18	NA	NA
WP_148307007.1|6524070_6524544_+	DUF4326 domain-containing protein	NA	A0A142KCP7	Gordonia_phage	41.3	7.6e-17
WP_158436384.1|6524695_6524851_+	hypothetical protein	NA	NA	NA	NA	NA
WP_148307008.1|6524904_6525231_+	hypothetical protein	NA	A0A088F7U7	Mycobacterium_phage	34.3	6.9e-09
WP_025352154.1|6525227_6525707_+	hypothetical protein	NA	NA	NA	NA	NA
WP_148307009.1|6525767_6526097_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025352156.1|6526093_6526459_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025352157.1|6526963_6528526_+	TROVE domain-containing protein	NA	A0A1J0GW83	Streptomyces_phage	45.5	3.3e-117
WP_025352158.1|6528525_6529704_+	RtcB family protein	NA	G8I4I6	Mycobacterium_phage	67.2	7.7e-151
WP_025352159.1|6529708_6530395_+	nucleotidyltransferase domain-containing protein	NA	A0A1J0GW18	Streptomyces_phage	41.0	6.9e-35
WP_025352160.1|6530391_6530994_+	metallophosphoesterase	NA	A0A142F2L8	Mycobacterium_phage	45.4	2.4e-39
WP_148307010.1|6531473_6532619_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025352162.1|6532611_6533055_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025352163.1|6533119_6533779_+	hypothetical protein	NA	G9FH23	Rhodococcus_phage	49.4	1.2e-39
WP_025352164.1|6533895_6534102_+	hypothetical protein	NA	G9FH24	Rhodococcus_phage	55.9	2.2e-13
WP_025352165.1|6534288_6534534_+	hypothetical protein	NA	G1DUC7	Mycobacterium_virus	48.8	1.8e-14
WP_025352166.1|6534785_6535079_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025352167.1|6535202_6535466_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025352168.1|6535465_6535969_+	hypothetical protein	NA	A0A1B3AYB9	Gordonia_phage	38.4	1.5e-07
>prophage 6
NZ_CP006850	Nocardia nova SH22a chromosome, complete genome	8348532	6541454	6553283	8348532	portal	Mycobacterium_phage(50.0%)	18	NA	NA
WP_025352178.1|6541454_6541703_+	hypothetical protein	NA	A0A1P8DUC6	Mycobacterium_phage	49.3	8.3e-15
WP_025352179.1|6541821_6542856_+	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
WP_025352180.1|6542852_6543488_+	glycosyltransferase	NA	A0A1P8DUC9	Mycobacterium_phage	48.6	2.5e-47
WP_025352181.1|6543525_6543801_+	hypothetical protein	NA	A0A1C9EI77	Rhodococcus_phage	49.2	6.4e-08
WP_158436386.1|6543862_6544021_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158436388.1|6544017_6544179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025352182.1|6544178_6544592_+	HNH endonuclease	NA	Q8SBD7	Shigella_phage	40.2	1.3e-12
WP_038555212.1|6544845_6545373_+	hypothetical protein	NA	Q6VY59	Streptomyces_phage	50.0	1.7e-33
WP_081769803.1|6545631_6545904_+	hypothetical protein	NA	A0A0K0N6I0	Gordonia_phage	39.8	1.1e-07
WP_025352185.1|6545911_6547558_+	hypothetical protein	NA	A0A142K6H6	Mycobacterium_phage	61.2	7.4e-200
WP_025352186.1|6547576_6548998_+|portal	phage portal protein	portal	A5YJX1	Mycobacterium_phage	54.3	1.2e-129
WP_025352187.1|6548978_6549929_+	hypothetical protein	NA	A0A249XMM5	Mycobacterium_phage	37.9	9.2e-46
WP_148307013.1|6550002_6550671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025352189.1|6550682_6551504_+	hypothetical protein	NA	Q855K4	Mycobacterium_virus	68.1	2.3e-101
WP_025352190.1|6551505_6552084_+	hypothetical protein	NA	A0A2P1CI81	Actinomyces_phage	43.5	1.3e-29
WP_025352191.1|6552092_6552422_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025352192.1|6552423_6552732_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025352193.1|6552728_6553283_+	hypothetical protein	NA	A0A097EWD5	Mycobacterium_phage	31.8	4.4e-16
>prophage 7
NZ_CP006850	Nocardia nova SH22a chromosome, complete genome	8348532	7979530	8006779	8348532	portal,capsid,terminase,tail	uncultured_Caudovirales_phage(33.33%)	40	NA	NA
WP_025353356.1|7979530_7980298_+	phage antirepressor N-terminal domain-containing protein	NA	A0A1B3AYU1	Gordonia_phage	68.7	1.5e-94
WP_025353357.1|7980371_7981217_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025353358.1|7981213_7981474_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025353359.1|7981470_7981812_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025353360.1|7981808_7982045_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025353361.1|7982041_7982827_+	hypothetical protein	NA	A0A173G9J5	Propionibacterium_phage	50.2	3.7e-56
WP_025353362.1|7982823_7984134_+	AAA family ATPase	NA	A0A2H4J7B1	uncultured_Caudovirales_phage	50.0	1.6e-117
WP_025353363.1|7984161_7984443_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025353364.1|7984546_7985212_+	hypothetical protein	NA	A0A142K7R6	Mycobacterium_phage	47.4	2.4e-40
WP_158436426.1|7985208_7985364_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025353365.1|7985424_7985664_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158436428.1|7986152_7986302_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025353366.1|7986301_7986565_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025353367.1|7986569_7986851_+	HNH endonuclease	NA	A0A2H4J9P9	uncultured_Caudovirales_phage	53.3	1.2e-22
WP_025353368.1|7986980_7987301_+	hypothetical protein	NA	A0A2H4IZP1	uncultured_Caudovirales_phage	63.6	6.7e-17
WP_051494888.1|7987332_7988748_+|terminase	terminase	terminase	A0A142KAW2	Gordonia_phage	58.7	3.0e-149
WP_051495216.1|7988756_7990223_+|portal	phage portal protein	portal	A0A2H4J2P6	uncultured_Caudovirales_phage	62.3	2.2e-155
WP_025353371.1|7990219_7991089_+	hypothetical protein	NA	A0A2P1A0Q1	Gordonia_phage	44.1	2.5e-53
WP_025353372.1|7991139_7991715_+	hypothetical protein	NA	A0A142KAW5	Gordonia_phage	68.6	5.1e-07
WP_025353373.1|7991730_7992651_+|capsid	phage major capsid protein	capsid	A0A2H4IYA3	uncultured_Caudovirales_phage	72.8	4.3e-125
WP_025353374.1|7992650_7992896_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025353375.1|7992902_7993364_+	hypothetical protein	NA	A0A2H4IYA5	uncultured_Caudovirales_phage	52.1	3.7e-32
WP_025353376.1|7993356_7993722_+	hypothetical protein	NA	A0A2D1G9N7	Mycobacterium_phage	52.5	4.1e-26
WP_025353377.1|7993718_7993937_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025353378.1|7993926_7994193_+	hypothetical protein	NA	NA	NA	NA	NA
WP_148307078.1|7994185_7994590_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025353380.1|7994656_7995472_+	IPT/TIG domain-containing protein	NA	A0A222ZEQ0	Arthrobacter_phage	34.4	3.6e-30
WP_025353381.1|7995567_7995882_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025353382.1|7995944_7996127_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025353383.1|7996137_7999446_+|tail	phage tail tape measure protein	tail	E0YQ16	Mycobacterium_phage	45.2	2.2e-62
WP_025353384.1|7999447_8000404_+	hypothetical protein	NA	A0A2H4JHX7	uncultured_Caudovirales_phage	38.0	4.9e-47
WP_025353385.1|8000403_8002098_+	hypothetical protein	NA	G1BSP2	Mycobacterium_virus	44.3	4.2e-134
WP_025353386.1|8002120_8002801_+	translation initiation factor IF-2 N-terminal domain-containing protein	NA	A0A2D1G9P8	Mycobacterium_phage	40.4	2.9e-17
WP_025353387.1|8002804_8003608_+	N-acetylmuramoyl-L-alanine amidase	NA	F1B2S6	Tsukamurella_phage	59.2	3.9e-53
WP_025353388.1|8003604_8003799_+	hypothetical protein	NA	D4P732	Rhodococcus_phage	52.5	3.7e-10
WP_148307079.1|8003801_8004188_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025353390.1|8004184_8004838_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025353391.1|8004834_8005176_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025353392.1|8005172_8006414_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025353393.1|8006434_8006779_+	hypothetical protein	NA	W8EKC3	Mycobacterium_phage	41.2	1.5e-06
