The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP003999	Klebsiella pneumoniae subsp. pneumoniae Kp13 chromosome, complete genome	5307003	1283330	1337527	5307003	integrase,holin,capsid,tRNA,terminase,tail	Salmonella_phage(39.53%)	61	1286623:1286638	1306230:1306245
WP_004149335.1|1283330_1284605_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_002913890.1|1284639_1285260_+	YfgM family protein	NA	NA	NA	NA	NA
WP_002913889.1|1285270_1286449_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_004144309.1|1286562_1288041_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
1286623:1286638	attL	CGCCTGACGCGCACTC	NA	NA	NA	NA
WP_025367974.1|1288158_1289238_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_004144303.1|1289287_1289506_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004149333.1|1289489_1290881_-	exodeoxyribonuclease VII large subunit	NA	A0A2H4UVM9	Bodo_saltans_virus	33.0	6.3e-35
WP_004151980.1|1291039_1292506_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	38.7	1.2e-87
WP_004151979.1|1292573_1294151_+	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA	NA
WP_025367975.1|1294342_1295593_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1X9TCT6	Enterobacter_phage	85.1	2.3e-206
WP_004243823.1|1295609_1295801_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025367976.1|1295797_1296391_-	adenine methylase	NA	T1SA14	Salmonella_phage	91.4	1.8e-108
WP_025269983.1|1296387_1296579_-	DUF1382 family protein	NA	A0A0P0ZC60	Stx2-converting_phage	62.7	6.0e-13
WP_025367977.1|1296575_1297340_-	hypothetical protein	NA	Q5QF30	Pseudomonas_virus	41.7	1.8e-36
WP_009485474.1|1297336_1297495_-	DUF1317 family protein	NA	T1SAR0	Salmonella_phage	80.8	8.7e-18
WP_004197333.1|1297487_1297781_-	PerC family transcriptional regulator	NA	T1S9J5	Salmonella_phage	71.1	2.3e-32
WP_004144294.1|1297890_1298139_-	AlpA family phage regulatory protein	NA	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	78.0	2.8e-31
WP_025367979.1|1298187_1299123_-	recombinase RecT	NA	A0A193GYL3	Enterobacter_phage	76.4	5.7e-141
WP_025367980.1|1299119_1299941_-	exodeoxyribonuclease VIII	NA	A0A193GYK2	Enterobacter_phage	82.1	6.0e-134
WP_025367981.1|1299937_1300237_-	hypothetical protein	NA	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	53.5	1.4e-19
WP_004197420.1|1300604_1301186_-	helix-turn-helix transcriptional regulator	NA	Q858D7	Salmonella_phage	64.3	4.6e-64
WP_025367982.1|1301340_1301574_+	hypothetical protein	NA	T1SAR5	Salmonella_phage	67.5	5.4e-24
WP_025367984.1|1301920_1303087_+	DNA cytosine methyltransferase	NA	Q858D4	Salmonella_phage	68.4	5.1e-147
WP_025367985.1|1303076_1303841_+	DNA replication domain protein	NA	G9L6A8	Escherichia_phage	90.6	1.7e-58
WP_023285444.1|1303966_1304311_+	DUF1064 domain-containing protein	NA	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	86.0	2.2e-53
WP_040120456.1|1304503_1305025_+	hypothetical protein	NA	Q5G8U6	Enterobacteria_phage	68.9	1.5e-26
WP_025367988.1|1305302_1305707_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025367989.1|1305703_1306093_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025367990.1|1306262_1306916_+	DUF551 domain-containing protein	NA	A0A193GYX5	Enterobacter_phage	84.1	5.6e-26
1306230:1306245	attR	GAGTGCGCGTCAGGCG	NA	NA	NA	NA
WP_025367991.1|1306915_1307104_+	hypothetical protein	NA	R9TNE4	Aeromonas_phage	78.3	3.8e-20
WP_025367992.1|1307096_1307435_+	hypothetical protein	NA	A0A193GYX4	Enterobacter_phage	80.0	1.8e-44
WP_025367993.1|1307509_1307767_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023285441.1|1307844_1308435_+|terminase	terminase small subunit	terminase	T1SBI8	Salmonella_phage	77.9	1.7e-77
WP_025367994.1|1308431_1309907_+	hypothetical protein	NA	Q858H3	Salmonella_phage	92.4	1.2e-278
WP_133242308.1|1309909_1310695_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152472.1|1311447_1311651_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025367995.1|1311654_1313334_+|tail	tail protein	tail	T1S9Z7	Salmonella_phage	58.7	1.7e-191
WP_025367996.1|1313330_1313636_+	hypothetical protein	NA	Q2A090	Sodalis_phage	51.3	1.4e-16
WP_040120462.1|1313917_1314316_+	peptidase	NA	T1SAP9	Salmonella_phage	59.5	1.6e-36
WP_025367998.1|1314328_1315336_+|capsid	phage capsid protein	capsid	T1S9H9	Salmonella_phage	93.4	8.5e-183
WP_004152466.1|1315345_1315738_+	hypothetical protein	NA	T1SA71	Salmonella_phage	89.9	1.5e-55
WP_025367999.1|1315730_1316009_+	hypothetical protein	NA	T1SA01	Salmonella_phage	58.9	1.1e-20
WP_025368000.1|1316057_1316669_+	hypothetical protein	NA	T1SAQ2	Salmonella_phage	49.0	6.3e-48
WP_025368001.1|1316668_1319146_+	hypothetical protein	NA	G9L6D0	Escherichia_phage	56.7	3.6e-267
WP_025368002.1|1319147_1319618_+	hypothetical protein	NA	Q858G2	Salmonella_phage	53.9	2.8e-43
WP_024622833.1|1319610_1320108_+	hypothetical protein	NA	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	41.7	5.2e-24
WP_025368003.1|1320120_1322865_+	hypothetical protein	NA	A0A193GYI3	Enterobacter_phage	39.7	5.7e-96
WP_025368004.1|1322864_1326254_+	hypothetical protein	NA	G9L6D4	Escherichia_phage	41.4	1.6e-119
WP_025368005.1|1326263_1326878_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071886199.1|1327148_1327661_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025368006.1|1327647_1328010_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040120412.1|1328184_1328877_-	hypothetical protein	NA	G9L6E2	Escherichia_phage	50.0	1.4e-59
WP_158423260.1|1328902_1329130_-	hypothetical protein	NA	NA	NA	NA	NA
WP_114071238.1|1329356_1330208_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025368008.1|1330429_1330726_-	hypothetical protein	NA	T1SA06	Salmonella_phage	64.3	8.1e-25
WP_025368009.1|1330877_1333442_+|tail	phage tail fiber protein	tail	A0A2H5BN49	Klebsiella_phage	74.0	4.4e-276
WP_025368010.1|1333727_1334132_+	membrane protein	NA	A0A0F6R7N0	Escherichia_coli_O157_typing_phage	82.6	2.3e-54
WP_025368011.1|1334118_1334415_+|holin	phage holin family protein	holin	A0A193GYK3	Enterobacter_phage	80.6	1.3e-35
WP_025368012.1|1334411_1334891_+	TIGR02594 family protein	NA	A0A222YWL8	Escherichia_phage	70.1	7.1e-63
WP_040120413.1|1334887_1335472_+	DUF2514 domain-containing protein	NA	Q858E9	Salmonella_phage	35.7	4.1e-12
WP_025368014.1|1335658_1337527_-	sulfatase-like hydrolase/transferase	NA	A0A2P0VMN7	Tetraselmis_virus	22.6	2.6e-07
>prophage 2
NZ_CP003999	Klebsiella pneumoniae subsp. pneumoniae Kp13 chromosome, complete genome	5307003	1703086	1709993	5307003	tRNA	Planktothrix_phage(33.33%)	6	NA	NA
WP_004175147.1|1703086_1703950_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.5	5.7e-10
WP_002912638.1|1703960_1704734_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.3	1.5e-25
WP_004151134.1|1704976_1705873_-	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.8	6.1e-15
WP_002912635.1|1706115_1707477_-|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	tRNA	Q6DW11	Phage_TP	94.5	2.5e-206
WP_004175198.1|1707795_1708518_-	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	8.3e-31
WP_004151135.1|1708514_1709993_-	two-component system sensor histidine kinase BaeS	NA	W8CYF6	Bacillus_phage	28.3	1.1e-29
>prophage 3
NZ_CP003999	Klebsiella pneumoniae subsp. pneumoniae Kp13 chromosome, complete genome	5307003	1746560	1754185	5307003		Enterobacteria_phage(28.57%)	7	NA	NA
WP_004152488.1|1746560_1747967_+	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.7	4.7e-38
WP_004152487.1|1748191_1749256_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	55.0	3.4e-105
WP_004152486.1|1749282_1750152_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	67.0	9.8e-111
WP_004152485.1|1750183_1751074_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	33.6	2.8e-28
WP_004152484.1|1751088_1751643_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	58.2	3.8e-52
WP_004152483.1|1751823_1752990_+	UDP-glucose 6-dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	54.7	4.1e-112
WP_004152482.1|1753183_1754185_+	NAD-dependent epimerase	NA	E3T4Y8	Cafeteria_roenbergensis_virus	28.6	1.2e-30
>prophage 4
NZ_CP003999	Klebsiella pneumoniae subsp. pneumoniae Kp13 chromosome, complete genome	5307003	2030366	2086900	5307003	protease,transposase,plate	Microcystis_virus(30.0%)	56	NA	NA
WP_002910830.1|2030366_2031113_+|protease	proteasome-type protease	protease	NA	NA	NA	NA
WP_025368108.1|2031551_2032538_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_004151439.1|2032530_2033331_+	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA	NA
WP_002910767.1|2033317_2033491_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004219597.1|2033788_2033932_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002910764.1|2034108_2035050_+	transcriptional regulator TdcA	NA	NA	NA	NA	NA
WP_002910762.1|2035143_2036133_+	bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA	NA	NA	NA	NA
WP_004145486.1|2036158_2037490_+	threonine/serine transporter TdcC	NA	NA	NA	NA	NA
WP_002910759.1|2037517_2038726_+	propionate kinase	NA	NA	NA	NA	NA
WP_004152312.1|2038754_2041049_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	41.8	2.3e-159
WP_004225356.1|2041100_2041247_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002910729.1|2041536_2042595_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002910727.1|2042704_2043619_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_004148804.1|2043628_2044915_+	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
WP_002910722.1|2044911_2045787_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	41.5	9.5e-05
WP_002910721.1|2045783_2046503_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.0	2.5e-11
WP_002910720.1|2046508_2047402_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002910719.1|2047685_2049329_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	50.4	9.8e-136
WP_002910717.1|2049378_2049855_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002910715.1|2049953_2050880_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004152313.1|2051183_2052479_+	MFS transporter	NA	Q6JIH2	Burkholderia_virus	36.8	1.3e-61
WP_004899032.1|2052490_2053300_+	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_004152315.1|2053274_2054174_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002910657.1|2054283_2054766_-	cold shock domain-containing protein	NA	NA	NA	NA	NA
WP_002910652.1|2055670_2056210_-	DUF2058 domain-containing protein	NA	NA	NA	NA	NA
WP_002910650.1|2056324_2056654_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_004148795.1|2056824_2056986_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002910645.1|2057222_2058563_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_004152316.1|2058559_2059213_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_025368109.1|2059216_2060914_+	OmpA family protein	NA	NA	NA	NA	NA
WP_025368111.1|2063877_2064360_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085955172.1|2064394_2065602_-|transposase	IS3 family transposase	transposase	Q9ZXG3	Shigella_phage	63.2	1.7e-100
WP_072199552.1|2065733_2066585_+	S-type Pyocin	NA	NA	NA	NA	NA
WP_002910593.1|2066585_2067095_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002910591.1|2067091_2067598_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002910586.1|2067834_2068344_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025368113.1|2068637_2069993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004200304.1|2069993_2070503_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002910551.1|2070499_2071006_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025368114.1|2071387_2072473_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004199323.1|2072513_2072825_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002910544.1|2072846_2073740_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	A0A7H6	Microcystis_virus	30.5	6.7e-14
WP_004217423.1|2073785_2073902_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152633.1|2073923_2074817_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	A0A075BSL8	Microcystis_phage	27.3	1.7e-12
WP_038435084.1|2074842_2074971_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004217421.1|2075112_2075886_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	A0A7H6	Microcystis_virus	28.1	1.2e-11
WP_004152632.1|2076061_2076952_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	A0A7H6	Microcystis_virus	29.8	4.1e-11
WP_072093175.1|2077294_2077429_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072093174.1|2077689_2077875_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002910497.1|2078172_2078439_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_004198077.1|2078442_2079600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152262.1|2079583_2082994_+	type VI secretion protein VasK	NA	NA	NA	NA	NA
WP_002910495.1|2083127_2084891_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_004152910.1|2084920_2085937_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_002910493.1|2085917_2086454_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_004152261.1|2086456_2086900_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
>prophage 5
NZ_CP003999	Klebsiella pneumoniae subsp. pneumoniae Kp13 chromosome, complete genome	5307003	2757317	2766731	5307003		Escherichia_phage(87.5%)	9	NA	NA
WP_162471611.1|2757317_2758952_+	DUF4981 domain-containing protein	NA	L0N6M2	Herpes_simplex_virus	55.7	9.0e-182
WP_025368139.1|2759006_2760272_+	MFS transporter	NA	NA	NA	NA	NA
WP_025368140.1|2760302_2761391_-	AAA family ATPase	NA	A0A077SLJ9	Escherichia_phage	99.7	1.4e-210
WP_004176262.1|2761477_2761738_-	hypothetical protein	NA	A0A077SK33	Escherichia_phage	98.8	5.4e-41
WP_063864613.1|2762035_2762896_+	class A beta-lactamase SHV-110	NA	A0A077SL40	Escherichia_phage	99.0	1.4e-154
WP_002210513.1|2762916_2763678_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
WP_025368142.1|2763938_2764841_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.3	1.0e-158
WP_025368143.1|2764852_2766118_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	99.5	7.3e-232
WP_002210516.1|2766110_2766731_+	aldolase	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
>prophage 6
NZ_CP003999	Klebsiella pneumoniae subsp. pneumoniae Kp13 chromosome, complete genome	5307003	3146787	3247898	5307003	head,integrase,holin,transposase,capsid,tRNA,portal,terminase,tail	Klebsiella_phage(39.22%)	102	3193428:3193442	3245459:3245473
WP_002901088.1|3146787_3147288_+|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	tRNA	NA	NA	NA	NA
WP_002901080.1|3147404_3147851_+	DUF441 domain-containing protein	NA	NA	NA	NA	NA
WP_004140469.1|3147834_3148629_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_020324105.1|3148736_3149912_+	CynX/NimT family MFS transporter	NA	NA	NA	NA	NA
WP_004140471.1|3149943_3150636_-	CTP synthase	NA	NA	NA	NA	NA
WP_004150778.1|3150781_3151291_+	DUF523 domain-containing protein	NA	NA	NA	NA	NA
WP_014343000.1|3151295_3151634_+	DUF488 family protein	NA	NA	NA	NA	NA
WP_004176548.1|3151623_3151863_-	DUF333 domain-containing protein	NA	NA	NA	NA	NA
WP_025368237.1|3152163_3153177_+	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	29.0	1.9e-12
WP_004150782.1|3153234_3153336_+	YoaK family small membrane protein	NA	NA	NA	NA	NA
WP_004213093.1|3153335_3153410_+	protein YoaJ	NA	NA	NA	NA	NA
WP_004140488.1|3153527_3153653_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004140489.1|3153712_3153976_-	DUF2534 family protein	NA	NA	NA	NA	NA
WP_004150783.1|3154106_3154745_-	leucine efflux protein LeuE	NA	NA	NA	NA	NA
WP_004148038.1|3154834_3155749_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	NA	A0A1W6JP29	Morganella_phage	50.4	1.1e-72
WP_004148037.1|3156210_3156330_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004150784.1|3156410_3157454_-	type II asparaginase	NA	NA	NA	NA	NA
WP_004140494.1|3157756_3158965_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_004183662.1|3159038_3160823_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	36.1	5.8e-17
WP_004140497.1|3161823_3163332_+	UbiD family decarboxylase	NA	NA	NA	NA	NA
WP_019705573.1|3163386_3163530_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004150790.1|3163642_3164329_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_015958198.1|3164726_3164897_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004190902.1|3164936_3165569_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_004140506.1|3166135_3166333_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025368238.1|3166448_3167459_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_004140511.1|3167455_3168862_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004179357.1|3168917_3169805_-	manganese catalase family protein	NA	NA	NA	NA	NA
WP_004140514.1|3169821_3170328_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_004148027.1|3170354_3170849_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_004150795.1|3170939_3171125_-	general stress protein	NA	NA	NA	NA	NA
WP_025368239.1|3171746_3172940_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_004140530.1|3173052_3173280_+	DUF1272 domain-containing protein	NA	NA	NA	NA	NA
WP_025368240.1|3173334_3173880_-	cysteine hydrolase	NA	NA	NA	NA	NA
WP_025368241.1|3174201_3174675_+	OsmC family protein	NA	NA	NA	NA	NA
WP_025368242.1|3174792_3175374_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023339918.1|3175507_3175939_+	VOC family protein	NA	NA	NA	NA	NA
WP_040120428.1|3176193_3176505_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_025368243.1|3176509_3176902_+	amino acid-binding protein	NA	NA	NA	NA	NA
WP_025368244.1|3176898_3177612_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_025368246.1|3179352_3180501_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025368247.1|3180667_3181369_-	hypothetical protein	NA	A0A0F7LBP9	Escherichia_phage	63.4	1.2e-79
WP_077253877.1|3181365_3182586_-	RNA-directed DNA polymerase	NA	A0A0F7LDS3	Escherichia_phage	74.0	3.1e-171
WP_071886209.1|3183632_3184067_-	hypothetical protein	NA	A0A286S1P0	Klebsiella_phage	93.0	5.9e-16
WP_025368250.1|3186252_3187101_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025368251.1|3187252_3188302_-	site-specific DNA-methyltransferase	NA	A5LH81	Enterobacteria_phage	76.4	3.7e-165
WP_025368252.1|3188451_3188643_-	MarR family transcriptional regulator	NA	Q8SBE3	Shigella_phage	79.4	4.6e-21
WP_071886210.1|3188853_3189222_-	hypothetical protein	NA	A0A2H4FSA1	Methylophilaceae_phage	30.5	2.3e-05
WP_025368253.1|3189249_3189807_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077253878.1|3190045_3190609_-	hypothetical protein	NA	Q8SBE4	Shigella_phage	56.8	1.8e-36
WP_004892953.1|3190659_3190812_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.0	3.8e-18
WP_025368254.1|3190966_3192463_-|tail	tail fiber domain-containing protein	tail	A0A0P0IDN1	Klebsiella_phage	63.7	6.4e-126
WP_025368255.1|3192531_3205236_-	DUF1983 domain-containing protein	NA	Q6UAW1	Klebsiella_phage	47.0	0.0e+00
3193428:3193442	attL	TCTTCCCGCTAACCG	NA	NA	NA	NA
WP_017899002.1|3205298_3205892_-|tail	tail assembly protein	tail	K7PHE5	Enterobacteria_phage	77.2	8.0e-80
WP_025368256.1|3205918_3206341_-	hypothetical protein	NA	J9Q806	Salmonella_phage	49.3	2.9e-28
WP_025368257.1|3206382_3207093_-	peptidase P60	NA	Q6UAW4	Klebsiella_phage	90.7	8.5e-137
WP_017899000.1|3207094_3207850_-|tail	phage minor tail protein L	tail	Q6UAW5	Klebsiella_phage	80.9	4.6e-125
WP_017898999.1|3207846_3208185_-|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	88.4	2.4e-57
WP_025368258.1|3208184_3211541_-|tail	phage tail tape measure protein	tail	Q6UAW7	Klebsiella_phage	87.2	0.0e+00
WP_014228914.1|3211773_3212139_-|tail	phage tail protein	tail	Q6UAW8	Klebsiella_phage	89.3	1.6e-51
WP_014228913.1|3212196_3212658_-|tail	major tail shaft subunit	tail	Q6UAX0	Klebsiella_phage	83.7	7.8e-67
WP_017898997.1|3212689_3213091_-	hypothetical protein	NA	Q6UAX1	Klebsiella_phage	94.0	1.7e-62
WP_017880258.1|3213087_3213477_-	hypothetical protein	NA	Q6UAX2	Klebsiella_phage	86.0	9.6e-58
WP_014228910.1|3213457_3213796_-|head,tail	head-tail adaptor protein	head,tail	Q6UAX3	Klebsiella_phage	91.1	5.6e-54
WP_023316689.1|3213792_3214110_-|head,tail	phage gp6-like head-tail connector protein	head,tail	Q6UAX4	Klebsiella_phage	89.8	2.6e-45
WP_014907814.1|3214090_3214351_-	hypothetical protein	NA	Q6UAX5	Klebsiella_phage	63.9	1.5e-22
WP_017898995.1|3214409_3215696_-|capsid	phage major capsid protein	capsid	Q6UAX6	Klebsiella_phage	89.5	2.0e-216
WP_017898994.1|3215773_3216694_-	S49 family peptidase	NA	Q6UAX7	Klebsiella_phage	87.9	4.8e-148
WP_025368259.1|3216730_3217990_-|portal	phage portal protein	portal	Q6UAX8	Klebsiella_phage	90.5	9.5e-224
WP_017898992.1|3217989_3218169_-	hypothetical protein	NA	Q6UAX9	Klebsiella_phage	57.6	3.1e-11
WP_012542167.1|3218162_3219884_-|terminase	terminase large subunit	terminase	Q7Y413	Yersinia_phage	57.4	1.1e-190
WP_017898991.1|3220566_3220998_-	hypothetical protein	NA	Q6UAS0	Klebsiella_phage	61.3	1.8e-41
WP_014228902.1|3220994_3221312_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040120429.1|3221263_3221626_-	HNH endonuclease	NA	Q6UAS2	Klebsiella_phage	80.8	9.8e-57
WP_017898986.1|3223375_3223726_-	hypothetical protein	NA	R9TPM9	Aeromonas_phage	39.8	1.8e-10
WP_025368260.1|3223722_3224220_-	lysozyme	NA	A0A1V0E5Q7	Salmonella_phage	85.8	6.7e-80
WP_017880269.1|3224219_3224435_-|holin	holin	holin	A5LH82	Enterobacteria_phage	87.3	7.9e-30
WP_023342896.1|3225858_3226461_-	hypothetical protein	NA	H9C175	Pectobacterium_phage	68.1	2.4e-76
WP_025368261.1|3226477_3227509_-	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	49.3	5.2e-95
WP_040120430.1|3227708_3228101_-	DNA-binding protein	NA	K7PHB4	Enterobacterial_phage	36.6	3.0e-11
WP_077253879.1|3228141_3228432_-	hypothetical protein	NA	H6WRY6	Salmonella_phage	56.9	6.1e-17
WP_025368263.1|3228443_3228677_-	DinI family protein	NA	K7PM44	Enterobacteria_phage	71.1	3.7e-25
WP_004178082.1|3228755_3230243_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_025368264.1|3230937_3231642_+	hypothetical protein	NA	A0A1B1IPD9	uncultured_Mediterranean_phage	41.6	2.5e-19
WP_072199635.1|3231904_3232873_-|transposase	IS5 family transposase	transposase	A0A1B0VFY5	Salmonella_phage	98.1	3.1e-182
WP_025368265.1|3233482_3234163_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040120431.1|3234531_3234972_-	PerC family transcriptional regulator	NA	NA	NA	NA	NA
WP_025368267.1|3234985_3235450_-	replication protein	NA	A0A0U2JGJ0	Escherichia_phage	69.5	2.9e-61
WP_025368268.1|3235442_3236426_-	hypothetical protein	NA	A0A0U2RT81	Escherichia_phage	54.4	1.9e-46
WP_014907826.1|3236477_3237032_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012542199.1|3237034_3237250_-	Rha family transcriptional regulator	NA	A0A0M4QX15	Salmonella_phage	57.5	2.0e-17
WP_012542200.1|3237351_3237741_+	helix-turn-helix domain-containing protein	NA	A0A0M4R5D1	Salmonella_phage	60.2	6.7e-35
WP_039103071.1|3238583_3238778_+	DUF1482 family protein	NA	NA	NA	NA	NA
WP_014228879.1|3238820_3239165_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_025368269.1|3239306_3241445_+	exonuclease	NA	S4TNL0	Salmonella_phage	42.7	1.9e-99
WP_012542206.1|3241497_3241743_+	excisionase	NA	NA	NA	NA	NA
WP_025368270.1|3241723_3242851_+|integrase	tyrosine-type recombinase/integrase	integrase	O21925	Phage_21	61.0	5.5e-122
WP_025368271.1|3242884_3243931_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004150800.1|3244118_3245369_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.1e-19
WP_004150801.1|3245609_3246260_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
3245459:3245473	attR	TCTTCCCGCTAACCG	NA	NA	NA	NA
WP_004150802.1|3246276_3246735_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_004150803.1|3246791_3247898_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
>prophage 7
NZ_CP003999	Klebsiella pneumoniae subsp. pneumoniae Kp13 chromosome, complete genome	5307003	3489490	3498963	5307003	protease,tRNA	Brazilian_cedratvirus(16.67%)	8	NA	NA
WP_004209699.1|3489490_3491212_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	34.3	1.5e-14
WP_004141853.1|3491238_3491958_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_001040187.1|3492311_3492530_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_025368305.1|3492659_3494939_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	1.1e-164
WP_002896520.1|3494969_3495287_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
WP_002896516.1|3495612_3495834_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
WP_025368306.1|3495910_3497851_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	41.0	5.0e-38
WP_002896440.1|3497847_3498963_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
>prophage 1
NZ_CP004000	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13f, complete sequence	295493	13384	60549	295493	transposase,integrase	Salmonella_phage(50.0%)	49	29390:29449	60547:61604
WP_072199635.1|13384_14353_-|transposase	IS5 family transposase	transposase	A0A1B0VFY5	Salmonella_phage	98.1	3.1e-182
WP_025368587.1|14354_14687_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004196361.1|14676_15714_-	conjugal transfer protein TraF	NA	NA	NA	NA	NA
WP_004196331.1|16079_16622_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025368588.1|16638_17163_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071528223.1|17355_17769_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004026319.1|18708_19173_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004196318.1|19172_19961_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162471626.1|22011_22980_-|transposase	IS5-like element IS903B family transposase	transposase	A0A1B0VFY5	Salmonella_phage	99.4	7.9e-186
WP_025368590.1|22981_23704_-	NERD domain-containing protein	NA	A0A2R2ZH57	Clostridioides_phage	48.0	4.8e-10
WP_004196347.1|23706_24843_-	S49 family peptidase	NA	G0YPK2	Erwinia_phage	29.0	5.7e-10
WP_004196348.1|24851_25526_-	DUF4400 domain-containing protein	NA	NA	NA	NA	NA
WP_004196339.1|25538_26636_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077253889.1|28118_29087_-|transposase	IS5 family transposase	transposase	A0A1B0VFY5	Salmonella_phage	97.8	5.3e-182
29390:29449	attL	TGGCTTTGTTGAATAAATCAGATTTCGGGTAAGTCTCCCCCGTAGCGGGTTGTGTTTTCA	NA	NA	NA	NA
WP_072199635.1|29446_30415_-|transposase	IS5 family transposase	transposase	A0A1B0VFY5	Salmonella_phage	98.1	3.1e-182
WP_040120488.1|31103_33176_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_004181768.1|33247_33478_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004197572.1|33588_34833_+	toprim domain protein	NA	A0A0H5AWB1	Pseudomonas_phage	25.8	8.2e-10
WP_004181766.1|34901_35441_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004181765.1|35585_35804_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004197575.1|36391_36634_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004181762.1|36681_37146_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004197581.1|37155_37563_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004197577.1|37605_38565_+	DNA replication terminus site-binding family protein	NA	NA	NA	NA	NA
WP_004181760.1|38561_39320_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004197568.1|39316_39640_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004197578.1|39791_40109_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004197571.1|40174_41311_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_004178082.1|41396_42884_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_004197576.1|43396_43651_+	hemolysin expression modulating protein	NA	NA	NA	NA	NA
WP_004197570.1|43736_44804_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004186900.1|46119_47004_-	hypothetical protein	NA	J9Q7H0	Salmonella_phage	43.2	2.6e-50
WP_017900807.1|48263_48716_+	hypothetical protein	NA	NA	NA	NA	NA
WP_124036893.1|48769_48955_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025368596.1|49762_50068_-	chorismate mutase	NA	NA	NA	NA	NA
WP_032451271.1|50249_50807_+	DUF2913 family protein	NA	NA	NA	NA	NA
WP_114267959.1|51123_51441_+	DUF2251 domain-containing protein	NA	NA	NA	NA	NA
WP_000427623.1|51622_52627_-|transposase	IS110-like element IS4321 family transposase	transposase	NA	NA	NA	NA
WP_000429836.1|52705_53140_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_001294663.1|53211_53562_+	mercuric transport protein MerT	NA	NA	NA	NA	NA
WP_000732292.1|53575_53851_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA	NA
WP_001340589.1|53886_54309_+	organomercurial transporter MerC	NA	NA	NA	NA	NA
WP_000105636.1|54360_56055_+	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	8.8e-39
WP_001277456.1|56072_56435_+	mercury resistance co-regulator MerD	NA	NA	NA	NA	NA
WP_000993386.1|56431_56668_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA	NA
WP_001300294.1|56703_57372_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_000935452.1|57410_58715_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_001067855.1|58761_59466_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_072199635.1|59580_60549_+|transposase	IS5 family transposase	transposase	A0A1B0VFY5	Salmonella_phage	98.1	3.1e-182
60547:61604	attR	TGAAAACACAACCCGCTACGGGGGAGACTTACCCGAAATCTGATTTATTCAACAAAGCCAGTCATCTTTAGTCATTCTTAATTTTTCAATTAATTCTGCCAATTTAGGACTTCTGTCTTTTTCCATCTGAATGTATTCTTCATAACGCTCTAGAGCATTCTGAATGCCTTCCTTGAAATATTCTCGGACGGCCTCTACTTCAATCAAATACTCTTCCAACTTAGAGGTTGGCAGTATATTCATGGAGCTGAAAGGAATGCAGTATTTACGTTTGAGATTACTCAATCTTGTATGAACAGCGCTTTTAAAGTTCAAAGCCTTAGTAGAAATCCATTGGACTTCAACCTTACTCACACTCGATTGGTCCGATACTTCATCTTCATCAAGAAACTGTCGAATTTCATTCGTTCTACGGCGACCCTGACATCCTTCGACATCTACCTTAATAATAACGGCACCATCTTGTAATTCAGGATTGCGGTCGATGAAACTTTTTACAGTGTTACTGATTTGAGTGGTATCAGCAATAGCAGCGATTTTGATATTAGCCATGATATTTCTCCAGTATGCACCGGAAAAATATCTCCCAAAGGGAAAATATTTCCCGGTGGGGGGGGGTAGGTAAAATTTAAATAAACGTATCAATTACAATTGTGAAATTGAACGTGATACTTCTTCCGGGAAAAGTTGCTCAAGCAAAATTTCAGCTTTACTACATGCTTCAGAAGATAACTTAGACGTGAATGCAATTTTAAACCCAACAGAAATTTCTTCATCAAGGACTTTTGAGGTAGAAATCCATGAAATCAATTCACGAATATCCATCACCAGTTCGTCATCTTTCAGATTGTTAAGTTCAAAAGCAACTTTTGCAAACATTCTTAAACATGAAGGTTTCAAATCAGGAAAATGAGCCTCAGCTGCACAATACATAGCTTGTTCATCAGGTCGAATCATCGGCAATATTAAAAAACGCTTAATAAATGCAGAGTCTTGGGACTGTGATGAAGCGAAACGCATATCCTCTCCACTCATGTTAGTGTTAGCTGTGCCAATAA	NA	NA	NA	NA
>prophage 2
NZ_CP004000	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13f, complete sequence	295493	67814	137196	295493	transposase,integrase	Escherichia_phage(25.0%)	55	58699:58758	136429:137249
58699:58758	attL	GGCACTGTTGCAAATAGTCGGTGGTGATAAACTTATCATCCCCTTTTGCTGATGGAGCTG	NA	NA	NA	NA
WP_025368602.1|67814_69041_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	O80301	Enterobacteria_phage	79.3	1.7e-156
WP_040120489.1|69326_69752_-|transposase	IS200/IS605 family transposase	transposase	I4AZM1	Saccharomonospora_phage	51.5	1.8e-33
WP_025368604.1|69788_71015_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	O80301	Enterobacteria_phage	76.6	6.2e-143
WP_025368606.1|72712_73561_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040120490.1|73609_76795_-	conjugal transfer protein TraN	NA	NA	NA	NA	NA
WP_004026524.1|76804_77842_-	traU family protein	NA	NA	NA	NA	NA
WP_004026523.1|77838_79200_-	type-F conjugative transfer system pilin assembly family protein	NA	NA	NA	NA	NA
WP_025368608.1|79186_79711_-	signal peptidase I	NA	NA	NA	NA	NA
WP_004181790.1|79847_84089_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004181791.1|84216_84753_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040120491.1|84740_85172_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025368212.1|85229_86210_-|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	98.8	2.6e-184
WP_004196672.1|86319_86778_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004196655.1|87462_88266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004196650.1|88255_88972_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004196661.1|88958_89459_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014386510.1|89430_89847_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025368609.1|89873_92591_-	TraC family protein	NA	NA	NA	NA	NA
WP_004181797.1|92635_93373_-	type IV conjugative transfer system lipoprotein TraV	NA	NA	NA	NA	NA
WP_025368610.1|93382_94234_-	disulfide isomerase	NA	NA	NA	NA	NA
WP_004181799.1|94236_94701_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004196651.1|94703_96074_-	conjugal transfer protein TrbI	NA	NA	NA	NA	NA
WP_014386508.1|96033_96552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004026506.1|96548_97718_-	traK family protein	NA	NA	NA	NA	NA
WP_004196647.1|97719_98580_-	traE family protein	NA	NA	NA	NA	NA
WP_024198097.1|98598_98901_-	plasmid transfer protein	NA	NA	NA	NA	NA
WP_004026504.1|99002_99371_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004196674.1|100645_101314_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004196640.1|101369_102134_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004196657.1|102261_103440_+	hypothetical protein	NA	A0A1P8DTT7	Salmonella_phage	33.0	9.1e-19
WP_071528227.1|103804_104326_+	hypothetical protein	NA	NA	NA	NA	NA
WP_070083073.1|104486_106925_+	DUF4165 domain-containing protein	NA	NA	NA	NA	NA
WP_153908803.1|106896_107052_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004181813.1|109870_111118_+	ParA family protein	NA	Q1MVJ3	Enterobacteria_phage	23.0	1.4e-12
WP_004181814.1|111117_112128_+	chromosome partitioning protein ParB	NA	NA	NA	NA	NA
WP_087859145.1|112789_113897_+|transposase	IS3-like element ISKpn20 family transposase	transposase	S5WIU1	Leptospira_phage	37.2	1.1e-42
WP_025368614.1|114049_116455_-	DUF4165 domain-containing protein	NA	NA	NA	NA	NA
WP_025368615.1|116593_118999_-	DUF4165 domain-containing protein	NA	NA	NA	NA	NA
WP_025368616.1|119134_121540_-	DUF4165 domain-containing protein	NA	NA	NA	NA	NA
WP_025368617.1|121686_122364_-	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_001067855.1|122762_123467_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_077253891.1|123412_123844_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_000845048.1|123812_124826_-|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
WP_001830196.1|124982_125456_+	trimethoprim-resistant dihydrofolate reductase DfrA15	NA	G3MBI7	Bacillus_virus	30.2	1.2e-17
WP_025368619.1|125754_127014_+	chloramphenicol efflux MFS transporter CmlA4	NA	S4TR35	Salmonella_phage	31.3	1.1e-25
WP_001261740.1|127106_127898_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
WP_000679427.1|128021_128369_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
WP_000259031.1|128362_129202_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
WP_000050481.1|129606_131148_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_025368620.1|131646_132522_+	class A extended-spectrum beta-lactamase CTX-M-2	NA	A0A1B0VBP7	Salmonella_phage	81.5	1.0e-123
WP_000679427.1|133605_133953_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
WP_000259031.1|133946_134786_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
WP_000376623.1|134913_135414_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_001163403.1|135589_136372_-	ATP-binding protein	NA	A0A2L1IVB6	Escherichia_phage	35.0	2.5e-33
WP_001067855.1|136491_137196_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
136429:137249	attR	GGCACTGTTGCAAATAGTCGGTGGTGATAAACTTATCATCCCCTTTTGCTGATGGAGCTGCACATGAACCCATTCAAAGGCCGGCATTTTCAGCGTGACATCATTCTGTGGGCCGTACGCTGGTACTGCAAATACGGCATCAGTTACCGTGAGCTGCAGGAGATGCTGGCTGAACGCGGAGTGAATGTCGATCACTCCACGATTTACCGCTGGGTTCAGCGTTATGCGCCTGAAATGGAAAAACGGCTGCGCTGGTACTGGCGTAACCCTTCCGATCTTTGCCCGTGGCACATGGATGAAACCTACGTGAAGGTCAATGGCCGCTGGGCGTATCTGTACCGGGCCGTCGACAGCCGGGGCCGCACTGTCGATTTTTATCTCTCCTCCCGTCGTAACAGCAAAGCTGCATACCGGTTTCTGGGTAAAATCCTCAACAACGTGAAGAAGTGGCAGATCCCGCGATTCATCAACACGGATAAAGCGCCCGCCTATGGTCGCGCGCTTGCTCTGCTCAAACGCGAAGGCCGGTGCCCGTCTGACGTTGAACACCGACAGATTAAGTACCGGAACAACGTGATTGAATGCGATCATGGCAAACTGAAACGGATAATCGGCGCCACGCTGGGATTTAAATCCATGAAGACGGCTTACGCCACCATCAAAGGTATTGAGGTGATGCGTGCACTACGCAAAGGCCAGGCCTCAGCATTTTATTATGGTGATCCCCTGGGCGAAATGCGCCTGGTAAGCAGAGTTTTTGAAATGTAAGGCCTTTGAATAAGACAAAAGGCTGCCTCATCGCTAACTTTGCAACAGTGCCC	NA	NA	NA	NA
>prophage 3
NZ_CP004000	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13f, complete sequence	295493	142029	151467	295493		Escherichia_phage(41.67%)	16	NA	NA
WP_004026394.1|142029_142638_-	hypothetical protein	NA	K4JV11	Caulobacter_phage	42.2	1.5e-25
WP_004026395.1|142707_143157_-	hypothetical protein	NA	A0A1I9KFG8	Aeromonas_phage	45.2	2.9e-18
WP_162140056.1|143701_143869_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025368622.1|143925_144198_-	hypothetical protein	NA	I7B2L9	Escherichia_phage	47.8	5.5e-12
WP_016947069.1|144467_144653_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025368623.1|144652_145342_-	DUF551 domain-containing protein	NA	A0A2I6PID9	Escherichia_phage	63.4	2.4e-19
WP_025368624.1|145338_145821_-	hypothetical protein	NA	A0A077SLK5	Escherichia_phage	58.3	4.4e-12
WP_153236429.1|146157_146493_-	hypothetical protein	NA	J9Q804	Salmonella_phage	51.4	3.3e-14
WP_004197228.1|147071_147458_-	hypothetical protein	NA	H6WRY2	Salmonella_phage	85.1	3.7e-17
WP_004883219.1|147874_148519_-	hypothetical protein	NA	A0A0U4JEF1	Pseudomonas_phage	39.8	1.4e-05
WP_062826758.1|149220_149409_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025368625.1|149405_149903_-	hypothetical protein	NA	A0A076G835	Escherichia_phage	57.0	1.5e-23
WP_004026415.1|149996_150215_-	hypothetical protein	NA	R9TRD3	Aeromonas_phage	66.7	4.4e-20
WP_004197205.1|150380_150632_-	hypothetical protein	NA	S5MQM0	Escherichia_phage	76.7	1.9e-22
WP_004026416.1|150751_151066_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004026417.1|151146_151467_-	hypothetical protein	NA	J9Q750	Salmonella_phage	50.9	2.2e-28
>prophage 4
NZ_CP004000	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13f, complete sequence	295493	175110	201561	295493	transposase,tRNA	Escherichia_phage(25.0%)	35	NA	NA
WP_025368640.1|175110_176313_+	restriction endonuclease	NA	E5E3X4	Burkholderia_phage	40.7	2.1e-34
WP_025368641.1|176402_177818_-	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	50.9	6.9e-106
WP_004026464.1|177944_178688_-	DNA replication protein DnaC	NA	V5UQI5	Shigella_phage	49.6	1.8e-60
WP_025368642.1|178684_179119_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004026466.1|179151_179412_-	hypothetical protein	NA	A0A0M3LSW2	Mannheimia_phage	41.0	5.9e-11
WP_004026468.1|179665_180109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025368643.1|180339_180699_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040120493.1|180883_181294_-	hypothetical protein	NA	Q71TH9	Escherichia_phage	60.8	4.6e-42
WP_004181824.1|181418_181733_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001067855.1|181839_182544_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_004181892.1|182618_182972_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A1B0VCD8	Salmonella_phage	80.2	7.1e-44
WP_004178082.1|183662_185150_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_004181893.1|185235_185658_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	49.3	6.3e-31
WP_025368644.1|185657_186929_+	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	58.1	1.5e-139
WP_004181895.1|187029_187473_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_004181896.1|187469_187940_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_004026352.1|188049_188310_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004883380.1|188881_190063_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_004181898.1|190134_190293_+	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA	NA
WP_001067855.1|190821_191526_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000954592.1|191664_191841_-	DUF4102 domain-containing protein	NA	T1S9J3	Salmonella_phage	68.6	1.0e-06
WP_001043260.1|192170_192986_+	sulfonamide-resistant dihydropteroate synthase Sul2	NA	A0A0B5J4J5	Pandoravirus	27.6	5.9e-09
WP_000251875.1|193072_193375_+	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_001445143.1|193268_193520_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025368645.1|193744_193993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025368646.1|194320_195262_+	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA	NA
WP_025368647.1|195261_196350_+|tRNA	tRNA-guanine transglycosylase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	33.8	4.3e-47
WP_025368648.1|196342_197137_+	RmtG family 16S rRNA (guanine(1405)-N(7))-methyltransferase	NA	NA	NA	NA	NA
WP_025368649.1|197090_197387_+	hypothetical protein	NA	M1PLC5	Streptococcus_phage	48.5	5.6e-10
WP_071886229.1|197316_197532_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001120888.1|197562_199056_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_000743213.1|199266_199491_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001446887.1|199487_200225_-	recombinase family protein	NA	NA	NA	NA	NA
WP_001044210.1|200710_200851_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001067855.1|200856_201561_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
>prophage 5
NZ_CP004000	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13f, complete sequence	295493	207491	258552	295493	transposase,integrase,protease	Enterobacteria_phage(20.0%)	48	205118:205132	211514:211528
205118:205132	attL	ACGAACAGGGGGAAT	NA	NA	NA	NA
WP_004187383.1|207491_208232_-|integrase	tyrosine-type recombinase/integrase	integrase	I3WFA4	Macacine_betaherpesvirus	51.6	9.5e-22
WP_020316874.1|208250_208454_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004187390.1|208495_208981_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004206901.1|208977_209565_-	restriction endonuclease	NA	NA	NA	NA	NA
WP_004187394.1|209557_209806_-	helix-turn-helix transcriptional regulator	NA	A0A248SLB9	Klebsiella_phage	53.0	1.6e-10
WP_015586036.1|209802_210264_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004206899.1|210404_210950_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004206898.1|211102_211510_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015062853.1|211511_212090_-	hypothetical protein	NA	NA	NA	NA	NA
211514:211528	attR	ATTCCCCCTGTTCGT	NA	NA	NA	NA
WP_004206896.1|212067_212424_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004206895.1|212951_214226_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004206894.1|214243_214501_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004206893.1|214501_215185_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004187411.1|215229_215448_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004187413.1|215450_215660_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024190314.1|215782_217048_-	translesion error-prone DNA polymerase V subunit UmuC	NA	A0A1W6JNT0	Morganella_phage	50.4	1.3e-111
WP_025368652.1|217035_217470_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	54.5	8.0e-29
WP_020277900.1|217562_217928_-	type II toxin-antitoxin system toxin endoribonuclease PemK	NA	NA	NA	NA	NA
WP_004187429.1|217896_218154_-	type II toxin-antitoxin system antitoxin PemI	NA	NA	NA	NA	NA
WP_073546084.1|218245_218578_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000027057.1|218893_219754_-	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
WP_000722315.1|220453_221278_-	oxacillin-hydrolyzing class D beta-lactamase OXA-9	NA	NA	NA	NA	NA
WP_001206315.1|221337_222126_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA	NA
WP_014454105.1|222195_222750_-	aminoglycoside N-acetyltransferase AAC(6')-Ib'	NA	NA	NA	NA	NA
WP_001217881.1|222983_223541_-	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	98.4	2.0e-93
WP_021529705.1|223704_226710_+|transposase	Tn3-like element Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	99.9	0.0e+00
WP_002210513.1|228310_229072_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
WP_002904004.1|229092_229953_-	class A extended-spectrum beta-lactamase SHV-12	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
WP_001067855.1|230089_230794_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_022646501.1|232172_232502_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001217270.1|233023_234853_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000215804.1|235022_237710_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001270901.1|237861_238692_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085954987.1|238807_238996_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000139428.1|240076_240790_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000699996.1|240838_241105_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_000103071.1|241406_243383_-	excinuclease ABC subunit UvrB	NA	A7WKH8	Acidianus_filamentous_virus	39.0	7.1e-08
WP_001120775.1|243669_243945_+	formaldehyde-responsive transcriptional repressor FrmR	NA	NA	NA	NA	NA
WP_000842119.1|244003_245113_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	30.3	1.8e-32
WP_000070400.1|245163_245562_+	VOC family protein	NA	NA	NA	NA	NA
WP_000664785.1|245719_247054_+	DUF3422 family protein	NA	NA	NA	NA	NA
WP_000440264.1|247101_247932_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
WP_000233327.1|247949_249260_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000038427.1|249463_252115_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	33.8	2.1e-156
WP_072199635.1|252517_253486_-|transposase	IS5 family transposase	transposase	A0A1B0VFY5	Salmonella_phage	98.1	3.1e-182
WP_007372364.1|253771_254062_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070180862.1|254058_254595_-	hypothetical protein	NA	NA	NA	NA	NA
WP_072200942.1|257583_258552_+|transposase	IS5 family transposase	transposase	A0A1B0VFY5	Salmonella_phage	98.1	1.1e-182
