assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000512125.1_ASM51212v1	NZ_CP007025	Escherichia albertii KF1 chromosome, complete genome	1	1141801-1141938	1	CRISPRCasFinder	no		cas3,DinG,DEDDh,csa3	Orphan	AGGCCTGATAAGTCGCGTCAGCGACGCATCAGGCATCGGCTGTCG	45	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,DEDDh,csa3	NA,NA|224aa|down_3|NZ_CP007025.1_1145282_1145954_-,NA|79aa|down_6|NZ_CP007025.1_1149790_1150027_-	NA|256aa|up_9|NZ_CP007025.1_1128653_1129421_-	PRK11248, tauB, taurine ABC transporter ATP-binding subunit	NA|321aa|up_8|NZ_CP007025.1_1129433_1130396_-	PRK11480, tauA, taurine transporter substrate binding subunit; Provisional	NA|92aa|up_7|NZ_CP007025.1_1130701_1130977_+	PRK11352, PRK11352, formaldehyde-responsive transcriptional repressor FrmR	NA|370aa|up_6|NZ_CP007025.1_1131011_1132121_+	cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases	NA|278aa|up_5|NZ_CP007025.1_1132315_1133149_+	TIGR02821, S-formylglutathione_hydrolase, S-formylglutathione hydrolase	NA|180aa|up_4|NZ_CP007025.1_1133254_1133794_-	COG3122, COG3122, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1021aa|up_3|NZ_CP007025.1_1134062_1137125_+	PRK09525, lacZ, beta-galactosidase	NA|629aa|up_2|NZ_CP007025.1_1137161_1139048_-	PRK10524, prpE, propionyl-CoA synthetase; Provisional	NA|484aa|up_1|NZ_CP007025.1_1139087_1140539_-	PRK09425, prpD, bifunctional 2-methylcitrate dehydratase/aconitate hydratase	NA|390aa|up_0|NZ_CP007025.1_1140572_1141742_-	PRK12351, PRK12351, methylcitrate synthase; Provisional	NA|297aa|down_0|NZ_CP007025.1_1141961_1142852_-	PRK11320, prpB, 2-methylisocitrate lyase; Provisional	NA|529aa|down_1|NZ_CP007025.1_1143089_1144676_+	PRK15424, PRK15424, propionate catabolism operon regulatory protein PrpR; Provisional	NA|92aa|down_2|NZ_CP007025.1_1144783_1145059_-	PRK09929, PRK09929, hypothetical protein; Provisional	NA|224aa|down_3|NZ_CP007025.1_1145282_1145954_-	NA	NA|211aa|down_4|NZ_CP007025.1_1146063_1146696_+	TIGR00949, Uncharacterized_membrane_protein_YahN, The Resistance to Homoserine/Threonine (RhtB) Family protein	NA|317aa|down_5|NZ_CP007025.1_1148796_1149747_-	PRK12352, PRK12352, putative carbamate kinase; Reviewed	NA|79aa|down_6|NZ_CP007025.1_1149790_1150027_-	NA	NA|473aa|down_7|NZ_CP007025.1_1150179_1151598_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|516aa|down_8|NZ_CP007025.1_1151597_1153145_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|288aa|down_9|NZ_CP007025.1_1153134_1153998_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)
GCF_000512125.1_ASM51212v1	NZ_CP007025	Escherichia albertii KF1 chromosome, complete genome	2	1211917-1212067	2	CRISPRCasFinder	no		cas3,DinG,DEDDh,csa3	Orphan	CAATCGGAGCACGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCT	49	1	1	1211966-1212018	NZ_CP007025.1_776453-776505	NA	1	1	Orphan	cas3,DinG,DEDDh,csa3	NA|104aa|up_2|NZ_CP007025.1_1209673_1209985_-,NA	NA|315aa|up_9|NZ_CP007025.1_1202244_1203189_+	pfam14415, DUF4424, Domain of unknown function (DUF4424)	NA|151aa|up_8|NZ_CP007025.1_1203998_1204451_-	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|352aa|up_7|NZ_CP007025.1_1204447_1205503_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|302aa|up_6|NZ_CP007025.1_1205632_1206538_-	PRK06778, PRK06778, hypothetical protein; Validated	NA|288aa|up_5|NZ_CP007025.1_1206540_1207404_-	PRK12482, PRK12482, flagellar motor stator protein MotA	NA|155aa|up_4|NZ_CP007025.1_1208140_1208605_-	pfam03748, FliL, Flagellar basal body-associated protein FliL	NA|355aa|up_3|NZ_CP007025.1_1208612_1209677_-	cd17470, T3SS_Flik_C, C-terminal domain of flagellar hook-length control protein FliK and similar domains	NA|104aa|up_2|NZ_CP007025.1_1209673_1209985_-	NA	NA|131aa|up_1|NZ_CP007025.1_1209989_1210382_-	pfam02561, FliS, Flagellar protein FliS	NA|439aa|up_0|NZ_CP007025.1_1210404_1211721_-	PRK08032, fliD, flagellar capping protein; Reviewed	NA|305aa|down_0|NZ_CP007025.1_1212131_1213046_-	NF033376, flg_lateral_LafA, lateral flagellin LafA	NA|284aa|down_1|NZ_CP007025.1_1213532_1214384_+	COG3710, CadC, DNA-binding winged-HTH domains [Transcription]	NA|100aa|down_2|NZ_CP007025.1_1214441_1214741_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|114aa|down_3|NZ_CP007025.1_1214750_1215092_-	COG4683, COG4683, Uncharacterized protein conserved in bacteria [Function unknown]	NA|326aa|down_4|NZ_CP007025.1_1215167_1216145_-	PRK14721, flhF, flagellar biosynthesis regulator FlhF; Provisional	NA|310aa|down_5|NZ_CP007025.1_1216161_1217091_-	PRK07192, flgL, flagellar hook-associated protein FlgL; Reviewed	NA|459aa|down_6|NZ_CP007025.1_1217105_1218482_-	PRK07191, flgK, flagellar hook-associated protein FlgK; Validated	NA|100aa|down_7|NZ_CP007025.1_1218685_1218985_-	PRK12708, flgJ, peptidoglycan hydrolase; Reviewed	NA|367aa|down_8|NZ_CP007025.1_1218984_1220085_-	PRK05303, flgI, flagellar basal body P-ring protein FlgI	NA|222aa|down_9|NZ_CP007025.1_1220099_1220765_-	PRK12407, flgH, flagellar basal body L-ring protein FlgH
GCF_000512125.1_ASM51212v1	NZ_CP007025	Escherichia albertii KF1 chromosome, complete genome	3	1713417-1713552	3	CRISPRCasFinder	no		cas3,DinG,DEDDh,csa3	Orphan	CTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCATGAGCCGT	52	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,DEDDh,csa3	NA,NA|377aa|down_3|NZ_CP007025.1_1717201_1718332_-	NA|115aa|up_9|NZ_CP007025.1_1699456_1699801_-	COG2105, COG2105, Uncharacterized conserved protein [Function unknown]	NA|1260aa|up_8|NZ_CP007025.1_1699803_1703583_-	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown]	NA|578aa|up_7|NZ_CP007025.1_1703579_1705313_-	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|213aa|up_6|NZ_CP007025.1_1705518_1706157_+	PRK00058, PRK00058, peptide-methionine (S)-S-oxide reductase MsrA	NA|448aa|up_5|NZ_CP007025.1_1706345_1707689_+	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|69aa|up_4|NZ_CP007025.1_1707749_1707956_-	pfam06526, DUF1107, Protein of unknown function (DUF1107)	NA|185aa|up_3|NZ_CP007025.1_1708279_1708834_+	COG3054, COG3054, Predicted transcriptional regulator [General function prediction only]	NA|247aa|up_2|NZ_CP007025.1_1709487_1710228_+	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|247aa|up_1|NZ_CP007025.1_1710338_1711079_-	PRK10931, PRK10931, adenosine-3'(2'),5'-bisphosphate nucleotidase; Provisional	NA|648aa|up_0|NZ_CP007025.1_1711425_1713369_+	PRK09420, cpdB, bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase	NA|44aa|down_0|NZ_CP007025.1_1713581_1713713_-	pfam01638, HxlR, HxlR-like helix-turn-helix	NA|322aa|down_1|NZ_CP007025.1_1713854_1714820_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|221aa|down_2|NZ_CP007025.1_1714927_1715590_+	PRK10992, PRK10992, iron-sulfur cluster repair protein YtfE	NA|377aa|down_3|NZ_CP007025.1_1717201_1718332_-	NA	NA|468aa|down_4|NZ_CP007025.1_1718598_1720002_-	PRK11049, PRK11049, D-alanine/D-serine/glycine permease; Provisional	NA|207aa|down_5|NZ_CP007025.1_1720309_1720930_-	PRK11570, PRK11570, peptidyl-prolyl cis-trans isomerase; Provisional	NA|213aa|down_6|NZ_CP007025.1_1721147_1721786_+	COG3061, OapA, Cell envelope opacity-associated protein A [Cell envelope biogenesis, outer membrane]	NA|216aa|down_7|NZ_CP007025.1_1721769_1722417_-	pfam17938, TetR_C_29, Tetracyclin repressor-like, C-terminal domain	NA|264aa|down_8|NZ_CP007025.1_1722628_1723420_+	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR	NA|281aa|down_9|NZ_CP007025.1_1723429_1724272_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]
GCF_000512125.1_ASM51212v1	NZ_CP007025	Escherichia albertii KF1 chromosome, complete genome	4	2221373-2221500	4	CRISPRCasFinder	no		cas3,DinG,DEDDh,csa3	Orphan	CCTACGGTTCAAAACTCCGGTAGGCACGATAAGACGC	37	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,DEDDh,csa3	NA,NA	NA|329aa|up_9|NZ_CP007025.1_2205710_2206697_-	PRK11768, PRK11768, serine/threonine protein kinase	NA|90aa|up_8|NZ_CP007025.1_2206773_2207043_-	pfam06288, DUF1040, Protein of unknown function (DUF1040)	NA|195aa|up_7|NZ_CP007025.1_2207112_2207697_+	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|176aa|up_6|NZ_CP007025.1_2207678_2208206_+	PRK10751, PRK10751, molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional	NA|182aa|up_5|NZ_CP007025.1_2213792_2214338_-	PRK11104, hemG, menaquinone-dependent protoporphyrinogen IX dehydrogenase	NA|484aa|up_4|NZ_CP007025.1_2214349_2215801_-	PRK10750, PRK10750, Trk system potassium transporter TrkH	NA|205aa|up_3|NZ_CP007025.1_2215839_2216454_-	PRK11568, PRK11568, IMPACT family protein	NA|444aa|up_2|NZ_CP007025.1_2216453_2217785_-	PRK13607, PRK13607, proline dipeptidase; Provisional	NA|730aa|up_1|NZ_CP007025.1_2217974_2220164_+	PRK11730, fadB, fatty acid oxidation complex subunit alpha FadB	NA|388aa|up_0|NZ_CP007025.1_2220173_2221337_+	PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed	NA|234aa|down_0|NZ_CP007025.1_2221608_2222310_-	PRK08051, fre, FMN reductase; Validated	NA|498aa|down_1|NZ_CP007025.1_2222355_2223849_-	PRK10922, PRK10922, 4-hydroxy-3-polyprenylbenzoate decarboxylase	NA|163aa|down_2|NZ_CP007025.1_2224015_2224504_+	PRK09014, rfaH, transcription/translation regulatory transformer protein RfaH	NA|261aa|down_3|NZ_CP007025.1_2224500_2225283_-	PRK10425, PRK10425, 3'-5' ssDNA/RNA exonuclease TatD	NA|259aa|down_4|NZ_CP007025.1_2225324_2226101_-	PRK10921, PRK10921, Sec-independent protein translocase subunit TatC	NA|172aa|down_5|NZ_CP007025.1_2226103_2226619_-	PRK01770, PRK01770, Sec-independent protein translocase subunit TatB	NA|90aa|down_6|NZ_CP007025.1_2226622_2226892_-	PRK03554, tatA, Sec-independent protein translocase subunit TatA	NA|547aa|down_7|NZ_CP007025.1_2226970_2228611_-	PRK04750, ubiB, putative ubiquinone biosynthesis protein UbiB; Reviewed	NA|202aa|down_8|NZ_CP007025.1_2228610_2229216_-	COG3165, COG3165, Uncharacterized protein conserved in bacteria [Function unknown]	NA|252aa|down_9|NZ_CP007025.1_2229229_2229985_-	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
