assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000508205.1_ASM50820v1	NC_023064	Pseudomonas sp. TKP, complete sequence	1	733838-733968	1	CRISPRCasFinder	no		DEDDh,RT,csa3,DinG,cas3,WYL	Orphan	ACCAGGCCTTTCTCTTCCAGGCGATTACGGCCATTTTCAGC	41	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,csa3,DinG,cas3,WYL	NA,NA|62aa|down_9|NC_023064.1_744871_745057_+	NA|239aa|up_9|NC_023064.1_724847_725564_+	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|256aa|up_8|NC_023064.1_726383_727151_+	cd05346, SDR_c5, classical (c) SDR, subgroup 5	NA|302aa|up_7|NC_023064.1_727368_728274_+	COG3965, COG3965, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|374aa|up_6|NC_023064.1_728332_729454_-	COG2942, COG2942, N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism]	NA|191aa|up_5|NC_023064.1_729625_730198_-	pfam04955, HupE_UreJ, HupE / UreJ protein	NA|205aa|up_4|NC_023064.1_730219_730834_-	cd05540, UreG, urease accessory protein UreG	NA|225aa|up_3|NC_023064.1_730873_731548_-	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones]	NA|167aa|up_2|NC_023064.1_731544_732045_-	PRK13261, ureE, urease accessory protein UreE; Provisional	NA|174aa|up_1|NC_023064.1_732382_732904_+	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]	NA|211aa|up_0|NC_023064.1_732909_733542_-	PRK11202, PRK11202, HTH-type transcriptional repressor FabR	NA|690aa|down_0|NC_023064.1_734506_736576_+	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane]	NA|177aa|down_1|NC_023064.1_736803_737334_-	COG2193, Bfr, Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism]	NA|297aa|down_2|NC_023064.1_737510_738401_+	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|296aa|down_3|NC_023064.1_738425_739313_-	pfam00892, EamA, EamA-like transporter family	NA|263aa|down_4|NC_023064.1_739410_740199_+	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain	NA|100aa|down_5|NC_023064.1_740270_740570_+	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF	NA|338aa|down_6|NC_023064.1_740746_741760_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|423aa|down_7|NC_023064.1_742055_743324_-	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins	NA|315aa|down_8|NC_023064.1_743609_744554_+	PRK10266, PRK10266, curved DNA-binding protein	NA|62aa|down_9|NC_023064.1_744871_745057_+	NA
GCF_000508205.1_ASM50820v1	NC_023064	Pseudomonas sp. TKP, complete sequence	2	3039929-3040031	2	CRISPRCasFinder	no		DEDDh,RT,csa3,DinG,cas3,WYL	Orphan	GAGCGGGCTTGCCCTGATGCCGTTCAGTTAAG	32	1	1	3039961-3039999	NC_023064.1_1371358-1371320	NA	1	1	Orphan	DEDDh,RT,csa3,DinG,cas3,WYL	NA,NA	NA|262aa|up_9|NC_023064.1_3024987_3025773_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|392aa|up_8|NC_023064.1_3025894_3027070_+	pfam01070, FMN_dh, FMN-dependent dehydrogenase	NA|309aa|up_7|NC_023064.1_3027247_3028174_-	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only]	NA|196aa|up_6|NC_023064.1_3028612_3029200_+	PRK15009, PRK15009, GDP-mannose pyrophosphatase NudK; Provisional	NA|206aa|up_5|NC_023064.1_3029701_3030319_+	PRK12423, PRK12423, LexA repressor; Provisional	NA|205aa|up_4|NC_023064.1_3030318_3030933_+	NF033429, ImuA_translesion, translesion DNA synthesis-associated protein ImuA	NA|471aa|up_3|NC_023064.1_3030940_3032353_+	cd03468, PolY_like, DNA Polymerase Y-family	NA|1024aa|up_2|NC_023064.1_3032396_3035468_+	PRK05672, dnaE2, error-prone DNA polymerase; Validated	NA|572aa|up_1|NC_023064.1_3035594_3037310_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|840aa|up_0|NC_023064.1_3037365_3039885_+	COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair]	NA|688aa|down_0|NC_023064.1_3040236_3042300_-	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|75aa|down_1|NC_023064.1_3042473_3042698_+	COG2841, COG2841, Uncharacterized protein conserved in bacteria [Function unknown]	NA|459aa|down_2|NC_023064.1_3042865_3044242_-	cd16348, VOC_YdcJ_like, uncharacterized metal-dependent enzyme similar to Shigella flexneri YdcJ	NA|470aa|down_3|NC_023064.1_3044531_3045941_+	pfam03573, OprD, outer membrane porin, OprD family	NA|879aa|down_4|NC_023064.1_3046009_3048646_+	pfam03200, Glyco_hydro_63, Glycosyl hydrolase family 63 C-terminal domain	NA|105aa|down_5|NC_023064.1_3048774_3049089_-	pfam02036, SCP2, SCP-2 sterol transfer family	NA|237aa|down_6|NC_023064.1_3049145_3049856_-	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|342aa|down_7|NC_023064.1_3050051_3051077_+	PRK11778, PRK11778, putative inner membrane peptidase; Provisional	NA|503aa|down_8|NC_023064.1_3051190_3052699_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|299aa|down_9|NC_023064.1_3052849_3053746_+	PRK09986, PRK09986, LysR family transcriptional regulator
GCF_000508205.1_ASM50820v1	NC_023064	Pseudomonas sp. TKP, complete sequence	3	3244203-3244281	3	CRISPRCasFinder	no		DEDDh,RT,csa3,DinG,cas3,WYL	Orphan	GTGGCAAGGGGACCTTGTTGTGGC	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,csa3,DinG,cas3,WYL	NA|1516aa|up_8|NC_023064.1_3231073_3235621_-,NA|351aa|up_1|NC_023064.1_3242543_3243596_+,NA	NA|72aa|up_9|NC_023064.1_3230786_3231002_+	COG3585, MopI, Molybdopterin-binding protein [Coenzyme metabolism]	NA|1516aa|up_8|NC_023064.1_3231073_3235621_-	NA	NA|382aa|up_7|NC_023064.1_3235722_3236868_-	TIGR04350, aminotransferase_class_I_and_II, putative C-S lyase	NA|437aa|up_6|NC_023064.1_3237021_3238332_-	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|211aa|up_5|NC_023064.1_3238614_3239247_-	cd01015, CSHase, N-carbamoylsarcosine amidohydrolase (CSHase) hydrolyzes N-carbamoylsarcosine to sarcosine, carbon dioxide and ammonia	NA|251aa|up_4|NC_023064.1_3239541_3240294_-	COG3473, COG3473, Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|267aa|up_3|NC_023064.1_3240304_3241105_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|378aa|up_2|NC_023064.1_3241101_3242235_-	PRK08163, PRK08163, 3-hydroxybenzoate 6-monooxygenase	NA|351aa|up_1|NC_023064.1_3242543_3243596_+	NA	NA|145aa|up_0|NC_023064.1_3243725_3244160_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|162aa|down_0|NC_023064.1_3244638_3245124_+	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]	NA|1174aa|down_1|NC_023064.1_3245126_3248648_+	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]	NA|216aa|down_2|NC_023064.1_3248693_3249341_-	pfam17938, TetR_C_29, Tetracyclin repressor-like, C-terminal domain	NA|575aa|down_3|NC_023064.1_3249501_3251226_+	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|173aa|down_4|NC_023064.1_3251335_3251854_-	COG3172, NadR, Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism]	NA|188aa|down_5|NC_023064.1_3251850_3252414_-	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter	NA|545aa|down_6|NC_023064.1_3252546_3254181_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|277aa|down_7|NC_023064.1_3254411_3255242_+	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase	NA|128aa|down_8|NC_023064.1_3255238_3255622_+	pfam06961, DUF1294, Protein of unknown function (DUF1294)	NA|119aa|down_9|NC_023064.1_3255610_3255967_-	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_000508205.1_ASM50820v1	NC_023064	Pseudomonas sp. TKP, complete sequence	4	6928176-6928318	1	PILER-CR	no	DEDDh	DEDDh,RT,csa3,DinG,cas3,WYL	Unclear	AACAACATAGATTGACACAGC	21	0	0	NA	NA	NA	2	2	Orphan	DEDDh,RT,csa3,DinG,cas3,WYL	NA|148aa|up_5|NC_023064.1_6917509_6917953_+,NA|126aa|up_0|NC_023064.1_6927748_6928126_-,NA|131aa|down_0|NC_023064.1_6928393_6928786_-	NA|642aa|up_9|NC_023064.1_6911419_6913345_-	cd03404, SPFH_HflK, High frequency of lysogenization K (HflK) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|208aa|up_8|NC_023064.1_6913833_6914457_+	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]	NA|585aa|up_7|NC_023064.1_6914467_6916222_+	pfam12147, Methyltransf_20, Putative methyltransferase	NA|432aa|up_6|NC_023064.1_6916224_6917520_+	cd14527, DSP_bac, unknown subfamily of bacterial and plant dual specificity protein phosphatases	NA|148aa|up_5|NC_023064.1_6917509_6917953_+	NA	NA|207aa|up_4|NC_023064.1_6917962_6918583_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|311aa|up_3|NC_023064.1_6918584_6919517_+	COG4589, COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only]	NA|1936aa|up_2|NC_023064.1_6919666_6925474_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|766aa|up_1|NC_023064.1_6925454_6927752_+	TIGR02073, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1C	NA|126aa|up_0|NC_023064.1_6927748_6928126_-	NA	NA|131aa|down_0|NC_023064.1_6928393_6928786_-	NA	NA|221aa|down_1|NC_023064.1_6929148_6929811_-	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family	DEDDh|183aa|down_2|NC_023064.1_6930014_6930563_+	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	NA|161aa|down_3|NC_023064.1_6930591_6931074_-	cd08070, MPN_like, Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding)	NA|595aa|down_4|NC_023064.1_6931070_6932855_-	cd00757, ThiF_MoeB_HesA_family, ThiF_MoeB_HesA	NA|417aa|down_5|NC_023064.1_6932838_6934089_-	cd05400, NT_2-5OAS_ClassI-CCAase, Nucleotidyltransferase (NT) domain of 2'5'-oligoadenylate (2-5A)synthetase (2-5OAS) and class I CCA-adding enzyme	NA|389aa|down_6|NC_023064.1_6934088_6935255_-	pfam18145, SAVED, SMODS-associated and fused to various effectors sensor domain	NA|1048aa|down_7|NC_023064.1_6935610_6938754_-	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism]	NA|495aa|down_8|NC_023064.1_6938750_6940235_-	PRK09783, PRK09783, copper/silver efflux system membrane fusion protein CusB; Provisional	NA|419aa|down_9|NC_023064.1_6940231_6941488_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]
