The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_022997	Hyphomicrobium nitrativorans NL23, complete sequence	3653837	1987644	1997023	3653837	tRNA	uncultured_Mediterranean_phage(75.0%)	9	NA	NA
WP_041318210.1|1987644_1988520_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	32.3	2.5e-29
WP_023787278.1|1988555_1989464_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	47.6	5.0e-41
WP_023787279.1|1989597_1990761_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.9	1.1e-29
WP_023787280.1|1990979_1991204_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	59.1	1.1e-05
WP_081717843.1|1991318_1991828_+	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA	NA
WP_023787282.1|1991827_1992643_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	45.2	3.4e-49
WP_023787283.1|1992851_1994138_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.9	1.2e-104
WP_023787284.1|1994283_1995078_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	41.7	2.1e-43
WP_051388539.1|1995484_1997023_+	peptidoglycan DD-metalloendopeptidase family protein	NA	Q8SBN9	Clostridium_phage	35.3	7.7e-18
>prophage 2
NC_022997	Hyphomicrobium nitrativorans NL23, complete sequence	3653837	2558618	2617656	3653837	protease,capsid,tRNA,portal,head,tail	Paracoccus_phage(25.0%)	54	NA	NA
WP_023787791.1|2558618_2560607_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.0	1.0e-123
WP_023787792.1|2560703_2562071_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_023787793.1|2562194_2562500_-	membrane protein insertion efficiency factor YidD	NA	NA	NA	NA	NA
WP_023787794.1|2563115_2563541_+	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA	NA
WP_023787795.1|2563695_2564664_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_023787796.1|2564779_2565211_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_023787797.1|2565395_2566136_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_023787798.1|2566384_2567068_+	PAS domain-containing protein	NA	NA	NA	NA	NA
WP_023787799.1|2567323_2567953_+	PilZ domain-containing protein	NA	NA	NA	NA	NA
WP_041318583.1|2568150_2568732_+	transglutaminase-like cysteine peptidase	NA	NA	NA	NA	NA
WP_023787801.1|2569033_2569564_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
WP_023787802.1|2569577_2569793_-	DUF3126 family protein	NA	NA	NA	NA	NA
WP_023787803.1|2569868_2570744_-	serine O-acetyltransferase	NA	NA	NA	NA	NA
WP_023787804.1|2571021_2571822_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_023787805.1|2572364_2572712_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081717719.1|2572895_2575643_-	methionine synthase	NA	NA	NA	NA	NA
WP_023787807.1|2575639_2576341_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023787808.1|2576345_2577407_-	homocysteine S-methyltransferase family protein	NA	A0A140XBC7	Dickeya_phage	57.4	9.4e-15
WP_023787809.1|2577476_2578406_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
WP_023787810.1|2578402_2579419_-	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA	NA
WP_023787811.1|2579923_2580526_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_051388551.1|2580726_2583321_+	aminopeptidase N	NA	NA	NA	NA	NA
WP_023787813.1|2583451_2584612_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_144083588.1|2584624_2585131_-	periplasmic heavy metal sensor	NA	NA	NA	NA	NA
WP_023787815.1|2585127_2585652_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081717857.1|2585722_2586364_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_023787817.1|2586466_2589418_-	bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase	NA	NA	NA	NA	NA
WP_023787818.1|2589448_2590909_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_023787819.1|2590892_2591573_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.0	1.3e-28
WP_051388552.1|2591999_2593562_-	Do family serine endopeptidase	NA	A0A1B1IT49	uncultured_Mediterranean_phage	28.7	6.6e-25
WP_023787821.1|2593656_2594904_+	peptidoglycan-binding protein	NA	NA	NA	NA	NA
WP_023787822.1|2594911_2595427_-	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA	NA
WP_023787823.1|2595437_2597426_-	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA	NA
WP_023787824.1|2597481_2597997_-	cytochrome c maturation protein CcmE	NA	NA	NA	NA	NA
WP_023787825.1|2597993_2599208_-	c-type cytochrome biogenesis protein CcmI	NA	NA	NA	NA	NA
WP_023787826.1|2599413_2599884_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_041316516.1|2600145_2601516_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_023787828.1|2601505_2602177_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023787829.1|2602335_2603628_-	TIGR02594 family protein	NA	A0A249Y3Q7	Serratia_phage	45.0	1.2e-27
WP_023787830.1|2603674_2607631_-|tail	glycoside hydrolase/phage tail family protein	tail	A0A0B5A7K5	Paracoccus_phage	40.6	6.2e-253
WP_081717720.1|2607618_2608191_-	C40 family peptidase	NA	A0A1V0DYB6	Dinoroseobacter_phage	50.7	2.7e-32
WP_023787832.1|2608105_2608978_-	DUF2163 domain-containing protein	NA	A0A0B5A5B8	Paracoccus_phage	46.5	6.2e-73
WP_023787833.1|2608974_2609613_-	DUF2460 domain-containing protein	NA	A0A0B5A2K3	Paracoccus_phage	48.8	3.2e-50
WP_023787834.1|2609634_2610225_-|tail	phage tail tape measure protein	tail	A0A0M7QE17	Escherichia_phage	70.0	9.9e-06
WP_081717721.1|2610234_2610408_-|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_023787836.1|2610407_2610782_-	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_023787837.1|2610798_2611212_-|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_023787838.1|2611231_2611642_-	DUF3168 domain-containing protein	NA	A0A2H4JF41	uncultured_Caudovirales_phage	32.1	1.3e-09
WP_041318607.1|2611824_2612130_-|head	phage head closure protein	head	NA	NA	NA	NA
WP_023787841.1|2612150_2612741_-|head,tail	phage head-tail connector protein	head,tail	A0A0F7L420	uncultured_marine_virus	34.0	2.5e-17
WP_041318612.1|2612942_2614187_-|capsid	phage major capsid protein	capsid	Q3HQT0	Burkholderia_phage	38.6	6.6e-76
WP_023787843.1|2614221_2614941_-|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	47.7	2.9e-36
WP_023787844.1|2615007_2616276_-|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	39.7	4.5e-72
WP_023787845.1|2616303_2617656_-	DNA-packaging protein	NA	A0A0K1LMR9	Caulobacter_phage	39.6	2.3e-66
