The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_022909	Lactobacillus johnsonii N6.2, complete sequence	1887251	528524	580646	1887251	transposase,protease,tRNA	Bacillus_phage(16.67%)	45	NA	NA
WP_117285382.1|528524_529927_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	39.6	2.9e-40
WP_080668818.1|530010_530718_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_023599319.1|530959_533374_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	67.1	0.0e+00
WP_023599320.1|533475_535134_+	polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_011161630.1|535238_536375_+	DUF2974 domain-containing protein	NA	NA	NA	NA	NA
WP_023599321.1|536462_537209_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023599322.1|537252_538098_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_023599323.1|538150_539077_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	28.4	1.0e-17
WP_023599324.1|539356_541033_+|tRNA	arginine--tRNA ligase	tRNA	A0A2I2L3K1	Orpheovirus	31.2	9.5e-70
WP_004895615.1|541144_542062_+	class II fructose-bisphosphate aldolase family protein	NA	NA	NA	NA	NA
WP_023599325.1|542128_542440_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023599327.1|542942_543479_+	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	27.5	4.3e-08
WP_023599328.1|543490_544162_+	type 1 glutamine amidotransferase	NA	NA	NA	NA	NA
WP_023599329.1|544232_544865_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_023599330.1|545086_546421_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A286QQE5	Streptococcus_phage	37.1	2.6e-62
WP_023599331.1|546520_546985_+|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	40.9	4.2e-28
WP_023599332.1|547028_547487_-	GAF domain-containing protein	NA	NA	NA	NA	NA
WP_023599333.1|547534_548746_-	chloride channel protein	NA	NA	NA	NA	NA
WP_023599334.1|548872_549868_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023599335.1|549935_550502_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_023599336.1|550501_551440_+	AEC family transporter	NA	NA	NA	NA	NA
WP_023599337.1|551455_552241_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_023599338.1|552280_553033_-	aquaporin family protein	NA	M1HWZ0	Paramecium_bursaria_Chlorella_virus	33.5	9.6e-30
WP_023599339.1|553235_554714_+	MFS transporter	NA	NA	NA	NA	NA
WP_023599340.1|554820_556272_+	MFS transporter	NA	NA	NA	NA	NA
WP_117285382.1|556364_557766_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	39.6	2.9e-40
WP_051356415.1|558036_558801_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023599342.1|559470_559608_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023599345.1|560305_560632_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023599346.1|560860_561289_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_080668798.1|561373_561577_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080668799.1|561573_561933_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080668800.1|562002_562461_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023599347.1|562502_563291_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_023599348.1|564083_565418_-	uracil transporter	NA	Q9KX94	Enterobacteria_phage	35.3	1.2e-62
WP_023599349.1|566728_567649_+	glutaminase A	NA	NA	NA	NA	NA
WP_014567214.1|567800_568421_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_014567215.1|568493_569849_-	peptidase C45	NA	NA	NA	NA	NA
WP_023599350.1|569882_571208_-	C1 family peptidase	NA	R4TV59	Phaeocystis_globosa_virus	34.6	7.3e-73
WP_041818562.1|571234_572899_-	amino acid permease	NA	NA	NA	NA	NA
WP_023599352.1|572970_574395_-	C69 family dipeptidase	NA	NA	NA	NA	NA
WP_023599353.1|574428_575754_-	C1 family peptidase	NA	R4TV59	Phaeocystis_globosa_virus	33.6	6.4e-69
WP_023599354.1|575788_577438_-	amino acid permease	NA	NA	NA	NA	NA
WP_023599355.1|577961_579335_+	APC family permease	NA	NA	NA	NA	NA
WP_023599356.1|579785_580646_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
>prophage 2
NC_022909	Lactobacillus johnsonii N6.2, complete sequence	1887251	614294	625856	1887251	transposase,bacteriocin,protease	Lactobacillus_virus(33.33%)	14	NA	NA
WP_011161707.1|614294_615452_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	C1KFS0	Lactobacillus_virus	43.3	1.5e-82
WP_011161708.1|615649_616447_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023599382.1|616459_618619_+	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	27.5	3.8e-47
WP_011161710.1|618629_619223_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_014567249.1|619349_619577_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_011161712.1|619587_619776_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_011161713.1|619862_620237_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023599384.1|620596_621646_+|transposase	IS30-like element ISLjo1 family transposase	transposase	H7BWC8	unidentified_phage	34.8	4.6e-46
WP_011161718.1|622698_622893_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011161719.1|623005_623296_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_023599386.1|623380_624613_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_023599387.1|624621_624984_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004896932.1|625188_625419_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023599388.1|625541_625856_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
>prophage 3
NC_022909	Lactobacillus johnsonii N6.2, complete sequence	1887251	771655	779135	1887251	transposase	Bacillus_phage(33.33%)	8	NA	NA
WP_023599471.1|771655_772075_+	NUDIX domain-containing protein	NA	A0A1X6WFB1	Pacmanvirus	32.1	4.4e-08
WP_041818578.1|772058_772697_+	uracil-DNA glycosylase	NA	A0A218MKQ4	uncultured_virus	37.8	4.6e-09
WP_011162245.1|772733_773357_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	56.3	3.2e-15
WP_023599473.1|773494_773743_+	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_003649044.1|773815_774037_+	YneF family protein	NA	NA	NA	NA	NA
WP_023599474.1|774113_775880_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	30.1	7.7e-54
WP_023599475.1|775869_777663_+	ABC transporter ATP-binding protein	NA	A0A1V0SJ29	Klosneuvirus	25.1	8.7e-13
WP_144080012.1|777733_779135_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	39.6	2.9e-40
>prophage 4
NC_022909	Lactobacillus johnsonii N6.2, complete sequence	1887251	1083183	1093546	1887251	protease,tRNA	Erwinia_phage(16.67%)	9	NA	NA
WP_014567527.1|1083183_1084578_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A1B2IB03	Erwinia_phage	26.1	4.7e-30
WP_004894572.1|1084588_1085113_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_023599655.1|1085117_1086041_-	tyrosine recombinase XerC	NA	S5W9T9	Leptospira_phage	29.2	1.6e-23
WP_023599656.1|1086043_1087360_-|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	tRNA	NA	NA	NA	NA
WP_023599657.1|1087457_1089539_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	36.5	9.3e-99
WP_023599658.1|1089604_1090450_-	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	38.7	9.8e-31
WP_023599659.1|1090504_1091257_-	ribonuclease HII	NA	D2TEQ2	Emiliania_huxleyi_virus	37.2	9.3e-25
WP_004894556.1|1091253_1092093_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_023599660.1|1092094_1093546_-	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	27.7	2.1e-09
>prophage 5
NC_022909	Lactobacillus johnsonii N6.2, complete sequence	1887251	1761866	1827097	1887251	transposase,protease	unidentified_phage(23.53%)	54	NA	NA
WP_023600021.1|1761866_1763477_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.0	1.6e-21
WP_023600022.1|1763496_1764003_-	O-acetyl-ADP-ribose deacetylase	NA	F1SVT2	Red_sea_bream_iridovirus	51.8	3.8e-38
WP_080668820.1|1764191_1764974_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_023599101.1|1764986_1766036_-|transposase	IS30 family transposase	transposase	H7BWC8	unidentified_phage	35.1	3.4e-49
WP_080668816.1|1766144_1766969_+	ABC transporter ATP-binding protein	NA	A0A076FI99	Aureococcus_anophage	30.6	1.4e-18
WP_023600025.1|1766975_1768556_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.7	1.4e-14
WP_023599651.1|1768784_1769834_+|transposase	IS30-like element ISLjo1 family transposase	transposase	H7BWC8	unidentified_phage	35.1	7.1e-47
WP_023600026.1|1770182_1770977_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_023600027.1|1771099_1773043_-	PTS beta-glucoside transporter subunit IIBCA	NA	NA	NA	NA	NA
WP_023600028.1|1773278_1774748_+	sucrose-6-phosphate hydrolase	NA	NA	NA	NA	NA
WP_011162548.1|1774758_1775745_+	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	26.5	1.7e-18
WP_014567893.1|1775782_1776559_-	tyrosine-protein phosphatase	NA	NA	NA	NA	NA
WP_023600029.1|1776761_1777577_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_004898090.1|1777652_1778336_+	cobyric acid synthase	NA	NA	NA	NA	NA
WP_023600030.1|1778316_1779705_+	amino acid permease	NA	NA	NA	NA	NA
WP_011162552.1|1779742_1780645_-	EamA family transporter	NA	NA	NA	NA	NA
WP_023599436.1|1781080_1782130_-|transposase	IS30 family transposase	transposase	H7BWC8	unidentified_phage	34.6	9.2e-47
WP_011162553.1|1782266_1783277_+	aspartate--ammonia ligase	NA	A0A1C9C5F0	Heterosigma_akashiwo_virus	44.7	3.2e-65
WP_023600031.1|1783323_1784724_-	APC family permease	NA	NA	NA	NA	NA
WP_023600032.1|1784741_1785467_-	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA	NA
WP_144080014.1|1785649_1787052_-|transposase	IS3-like element IS1223 family transposase	transposase	A0A1B1P773	Bacillus_phage	39.6	2.9e-40
WP_023600035.1|1787126_1788509_-	amino acid permease	NA	NA	NA	NA	NA
WP_011162556.1|1788498_1789893_-	amino acid permease	NA	NA	NA	NA	NA
WP_004898106.1|1790050_1790413_-	DUF956 family protein	NA	NA	NA	NA	NA
WP_023600036.1|1790478_1791408_-	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA	NA
WP_004898109.1|1791437_1792241_-	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA	NA
WP_023600037.1|1792262_1793258_-	PTS mannose transporter subunit IIAB	NA	NA	NA	NA	NA
WP_023600039.1|1799071_1800469_-	amino acid permease	NA	NA	NA	NA	NA
WP_023600040.1|1800595_1802710_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	38.7	1.8e-118
WP_041818652.1|1802964_1803876_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_011162562.1|1803865_1805185_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_041818538.1|1805350_1805587_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023600043.1|1805705_1806905_+	MFS transporter	NA	NA	NA	NA	NA
WP_041818539.1|1807144_1808071_-	serine hydrolase	NA	G1DB24	Mycobacterium_phage	25.1	1.7e-07
WP_023600045.1|1808097_1809399_-	D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA	NA	NA	NA	NA
WP_004896464.1|1809391_1809631_-	D-alanine--poly(phosphoribitol) ligase subunit DltC	NA	NA	NA	NA	NA
WP_023600046.1|1809660_1810884_-	D-alanyl-lipoteichoic acid biosynthesis protein DltB	NA	A0A125RNP0	Pseudomonas_phage	26.6	9.8e-24
WP_023600047.1|1810880_1812389_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9KZV5	Tupanvirus	28.4	2.2e-33
WP_023600048.1|1812409_1812568_-	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA	NA
WP_011162568.1|1812702_1812993_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023600049.1|1812995_1814147_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011162570.1|1814502_1814814_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011162571.1|1814818_1815163_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004898144.1|1815164_1815452_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004898147.1|1815737_1816022_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023600051.1|1816348_1816843_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_023600052.1|1816913_1818791_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	28.3	6.3e-62
WP_023600053.1|1818956_1820117_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_023600054.1|1820805_1822374_-	ABC transporter ATP-binding protein	NA	A0A2H4UU96	Bodo_saltans_virus	28.5	1.8e-17
WP_023600055.1|1822479_1823343_+	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023600057.1|1823614_1824262_-	pyroglutamyl-peptidase I	NA	NA	NA	NA	NA
WP_023600058.1|1824281_1825205_-	DUF979 domain-containing protein	NA	NA	NA	NA	NA
WP_023600059.1|1825206_1825881_-	DUF969 domain-containing protein	NA	NA	NA	NA	NA
WP_023599436.1|1826047_1827097_+|transposase	IS30 family transposase	transposase	H7BWC8	unidentified_phage	34.6	9.2e-47
