The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_022911	Helicobacter pylori BM012S, complete sequence	1660469	167857	230902	1660469	transposase,tRNA,integrase	Helicobacter_phage(41.67%)	53	214716:214775	226458:228488
WP_000312853.1|167857_168619_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	33.9	2.7e-32
WP_023591584.1|168637_169969_-	MFS transporter	NA	NA	NA	NA	NA
WP_023591585.1|170280_171537_+	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA	NA
WP_023591586.1|171548_172790_+	phosphopentomutase	NA	NA	NA	NA	NA
WP_023591587.1|172786_173488_+	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_023591588.1|173960_175862_+	outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_023591589.1|176323_177631_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	31.3	4.5e-51
WP_023591590.1|177759_178983_+	sugar MFS transporter	NA	NA	NA	NA	NA
WP_023591591.1|179252_179804_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023591592.1|179924_180758_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_023591593.1|180806_181553_-	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.6	3.6e-29
WP_023591594.1|181554_182226_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_023591595.1|182228_182882_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_162146320.1|183061_185155_+	carbon starvation protein A	NA	NA	NA	NA	NA
WP_023591598.1|187213_188851_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_023591599.1|188914_190075_+	MFS transporter	NA	NA	NA	NA	NA
WP_023591600.1|190081_191056_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2K9L162	Tupanvirus	22.7	3.3e-06
WP_001090949.1|191081_191273_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_023591601.1|191397_191979_+	DedA family protein	NA	NA	NA	NA	NA
WP_000516071.1|192070_192565_+	flavodoxin	NA	NA	NA	NA	NA
WP_023591602.1|192617_193040_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_023591603.1|193131_193665_-	Fic family protein	NA	NA	NA	NA	NA
WP_023591604.1|193691_194465_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_041201408.1|194478_198183_-	Hop family outer membrane protein HopL	NA	NA	NA	NA	NA
WP_023591606.1|198205_200290_-	Hop family outer membrane protein HopI	NA	NA	NA	NA	NA
WP_023591607.1|200397_201459_-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
WP_001105857.1|201470_201878_-	flagellar assembly protein FliW	NA	NA	NA	NA	NA
WP_023591608.1|202014_204633_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	39.1	1.0e-142
WP_000484802.1|204648_205995_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_000216129.1|206069_206300_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_001208533.1|206316_206664_+	KH domain-containing protein	NA	NA	NA	NA	NA
WP_023591609.1|206664_207219_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_023591610.1|207219_207909_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_023591611.1|207930_208287_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_023591612.1|208503_209301_+	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_038419646.1|211821_212211_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000965788.1|213680_214151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023591615.1|214205_214709_-	type IA DNA topoisomerase	NA	NA	NA	NA	NA
214716:214775	attL	ACCGTTACTACAAACCTATAAAATCCTATAAAGAGCTATAAAATTCTCTTAATTTAGGAT	NA	NA	NA	NA
WP_023591540.1|214768_216028_-|transposase	transposase	transposase	A0A1S5RGV0	Helicobacter_phage	98.6	2.6e-237
WP_023591539.1|216002_216656_-|transposase	IS607-like element IS607 family transposase	transposase	A0A1S5RGS9	Helicobacter_phage	98.6	7.6e-116
WP_023591616.1|216951_217344_-	DEAD/DEAH box helicase family protein	NA	M5AAC3	Nitratiruptor_phage	42.6	2.3e-19
WP_080261121.1|218199_218913_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038420330.1|218917_219547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023591620.1|220132_220615_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000006537.1|220746_220998_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000009099.1|220969_221773_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_023591621.1|222089_223157_-|integrase	tyrosine-type recombinase/integrase	integrase	S5W9T9	Leptospira_phage	26.7	1.3e-08
WP_000462384.1|224502_224712_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041200996.1|224708_224960_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023591624.1|225010_225409_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023591540.1|226510_227770_-|transposase	transposase	transposase	A0A1S5RGV0	Helicobacter_phage	98.6	2.6e-237
WP_023591539.1|227744_228398_-|transposase	IS607-like element IS607 family transposase	transposase	A0A1S5RGS9	Helicobacter_phage	98.6	7.6e-116
WP_023591629.1|230428_230902_+|transposase	IS200/IS605 family transposase	transposase	G9CU69	Helicobacter_phage	94.2	3.1e-79
226458:228488	attR	ACCGTTACTACAAACCTATAAAATCCTATAAAGAGCTATAAAATTCTCTTAATTTAGGATTTTTGTTGTATTCCTAGTTCAACCTTGCTGGTTGCTAAACGATTATTGGATAAATCATTCAACAGAGCTGTCAAGTCCATAGGCGTAAATTCGGCAGTAACTCTACCTACTAAATGCTTTAAAAGATTGATAGCAGCGTTTATATCTCTATCTAATTCAAAGCCACACTCTAGGCATTGATAAACCCTATCTTTAAGTTTTAAATCTTGTTTAACCTTTTGACAATTAGAGCAAGTCTTAGAGCTTGGATAGTAAGTGTCAGCTCTTAGAATTTCTTTATTAGAGTATTTAGCTTTATATTCTAATAGCGTGTTAAACACAGACATAGAAACATCGCTTAAAGATTTAGCTAACCTGTGATTTTTAAACATGTTTTTGACTTTCAAACTCTCTAAACAAAACGAGCTTGAGTGTCTTATAAGAGAGCTTGTGAGCTTGTGTAAAAAATCAAGTCTGATGTTAGCGATTTTTTCATGCAAGTGGGTAAGCTTTTTAGAATGCTTTAAGTAATTATTAGATTTTTTGGTTTTATCCCCTTTGGTTTTTGGGTGGATTTTTTTACTCAGTTGTCTGCTAATTCTTACAAGCTTTCTAGTAAGCTTATCTAAGGGCTTAGGGGCATAGATATTTAAGCCATTAGACAAACTCACAAAGGATTTAATCCCTATATCGATCCCTAGCTTATTATGACTCTCTTGGAGCTTATGGGTTCGCTTGTATTCACTCTCATCAATACCACAAGAGATTGAAACATAGAAATGATCACCCTTTTGAGTGATGGTAGCGTTATGGATTTTGCCTTGAAATCTTAGTTTTTCAGTGAGTTTGATTGGGGGTAAGTTAGGTATTTTTAAATAATCAGTATTAACTGTTTGAATGATTTTAATTTGGTCGCCCCCTATATAAAAAGAACCTTGAAACTCTCTTTTCTTTTTAAATTTAGGGTAACTCACTAAACCTTTTTTTAAATCCCTAAAAAACTTATTAAAGGCTAGATTCAAGTGGATAAAAGGCTGTTGGGTGGCGTATTTAGTTACTTCATAAACGAAATTAAATTGCGATTTTTTAAGAGCGTTAAATTCTTTTTTAAGTTGTAGATGGTTAGTTTTAATGCCTAGTTGATAGTTTTCTTTCCATTTAGCTAATCCCCAATTATAAGCTAACCTAGCGCACCCAAAAGCTTTTTTAAAGTAAGTAATATGCTTGTTATTGGGCTTTAAAGCGATTTTATGCGTGATTGAGATAGCTGACATTGTTAGTTATTACTTCTTGCATTTCATCTAAGAGCTTCTTGTTTTTCTTAGACCTAGAGCCATACAATCTAGCGCTAAAGACGGTTATGATTTCTAAAACATCTTTGGCTAATTCTTCTTCAAACCTCACATTTTCATCGCCCTTATTGATGATAACCACTTCTACTTCTTTAGCTTCACAAATACTGAATACCAATTCGGCTCCAAAGCGTAATAATCTGTCTTTATGCGTTAATACAAGGCGTTTGACTTGATTGTCTAAGATCAAGTTTAAAAGCTTGGTTAAGCCTTTTTTATAGTAGTTCATGCCACTCCCTAAATCTTGTATCACTTCATAGTTAAAGCCACATCTAGCGCAATAAAGCTCTAAAACTTGAACTTGTCTAATCAAATCATCTTGTTGGTCATGCGAGCTTACTCTAGCATAAGCTATTGTTTTTAATTCATCTTGATTAAAGACTATGTTTCTATTGATACGCCTTAAACTTTCTAACTTATAACGCCTTTCACCGCCTTTAGTGAGTTCATCAGGTTTTAACAAATCTTTTTTATCCCAATTGCGTAAGGTTTGGATAGTTACACCCAAAAGCTTACTCGCTTGACCGATTGACAGCATTCTTTTATTCATACAAGCAGTATAACACAAAACTCAACAACCTATACAAAAATTATAGTATTTTATAGGTTATTATAGTATTTTAGTTTCTGTTTGTAACCC	NA	NA	NA	NA
>prophage 2
NC_022911	Helicobacter pylori BM012S, complete sequence	1660469	332413	379636	1660469	transposase,tRNA	Helicobacter_phage(50.0%)	32	NA	NA
WP_023591717.1|332413_333394_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_023591718.1|333394_335179_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_021306708.1|335175_336222_+	microcin C ABC transporter permease YejB	NA	NA	NA	NA	NA
WP_038419687.1|336230_336821_+	SH3 domain-containing protein	NA	NA	NA	NA	NA
WP_023591720.1|336828_337620_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_023591721.1|337619_339539_+	VacB/RNase II family 3'-5' exoribonuclease	NA	Q0GXV6	Lactococcus_phage	30.1	1.0e-35
WP_023591722.1|339544_340567_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_023591723.1|340709_341138_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_023591724.1|341147_341693_+	single-stranded DNA-binding protein	NA	D7RWG9	Brochothrix_phage	38.9	7.0e-14
WP_000440196.1|341715_341973_+	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_023600112.1|342484_344605_+	Hop family adhesin BabB	NA	NA	NA	NA	NA
WP_000468330.1|345235_345466_-	YdcH family protein	NA	NA	NA	NA	NA
WP_023591726.1|345583_348127_+|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L1X7	Tupanvirus	35.3	6.3e-73
WP_023591727.1|348128_348692_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_000534786.1|349149_350154_-	formamidase	NA	NA	NA	NA	NA
WP_023591729.1|351456_351630_-	site-specific DNA-methyltransferase	NA	A0A249XUJ2	Enterococcus_phage	50.0	1.4e-05
WP_023591540.1|353240_354500_-|transposase	transposase	transposase	A0A1S5RGV0	Helicobacter_phage	98.6	2.6e-237
WP_023591539.1|354474_355128_-|transposase	IS607-like element IS607 family transposase	transposase	A0A1S5RGS9	Helicobacter_phage	98.6	7.6e-116
WP_023591733.1|356527_357235_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038419701.1|357239_357611_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000921941.1|359354_359636_-	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	NA	NA	NA	NA	NA
WP_023591735.1|359628_359943_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038420352.1|360280_362191_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA	NA
WP_023591737.1|362215_363400_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000394639.1|363443_363728_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023591738.1|363808_364465_-	ParA family protein	NA	A2I303	Vibrio_virus	23.8	1.9e-05
WP_023591739.1|364731_373158_-	DEAD/DEAH box helicase family protein	NA	A0A248SL14	Klebsiella_phage	34.2	2.8e-234
WP_023591540.1|374078_375338_-|transposase	transposase	transposase	A0A1S5RGV0	Helicobacter_phage	98.6	2.6e-237
WP_023591539.1|375312_375966_-|transposase	IS607-like element IS607 family transposase	transposase	A0A1S5RGS9	Helicobacter_phage	98.6	7.6e-116
WP_023591742.1|376385_377048_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023591539.1|377748_378402_+|transposase	IS607-like element IS607 family transposase	transposase	A0A1S5RGS9	Helicobacter_phage	98.6	7.6e-116
WP_023591540.1|378376_379636_+|transposase	transposase	transposase	A0A1S5RGV0	Helicobacter_phage	98.6	2.6e-237
